Perca flavescens (yellow perch): 114565254
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Entry
114565254 CDS
T07494
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114565254
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114565254
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
114565254
NCBI-ProteinID:
XP_028448982
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Position
12:11175186..11175908
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AA seq
240 aa
AA seq
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MAKPLDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKAKSLLKRDRFVFPLPSVLGDAAEHLKGFPMDSFLVPGD
KARAFLAPVSSPSSFSLLEPVAQFSTGAVQRMAEIPHALAAGALPYSAHTFGYQTGGIGG
LACHGQHTHTHPSSSPGYVVPCNCSAWSAASLQPQLAYILFPGGMAKNGMDSYTSPSSSV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacctttagatcacatcaaaagacccatgaatgctttcatggtgtggtccaga
ggccagaggaggaaaatggcccaggaaaacccaaagatgcacaactctgaaatcagcaag
aggctcggcgcggagtggaagctgctgtccgactccgagaaacgtccgtacatcgacgag
gccaagaggctgcgggctcagcacatgaaggagcacccggactacaagtacagaccgcgg
cgcaaagccaagagtctcctgaagagggaccgtttcgttttcccgctgccgtctgtactt
ggggacgcggcggagcatttgaagggatttcccatggactcctttcttgtccccggggat
aaagccagagctttcctcgctcccgtctcctccccctcttccttctcgctgctggagccc
gtggcgcagttcagcaccggagctgtccagcggatggcggagatcccgcacgctctggcc
gccggcgctttgccctacagcgcgcacacgttcggataccagactggagggattgggggt
ctggcttgccacggacagcacacccacacccacccgtcctccagcccgggatacgtggtg
ccgtgtaactgtagcgcctggtccgctgccagtttacagcctcagttagcctatattctc
ttccctggagggatggccaagaacggcatggactcgtacacttcccctagttccagtgtg
tga
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