Perca flavescens (yellow perch): 114565507
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Entry
114565507 CDS
T07494
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114565507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114565507
03036 Chromosome and associated proteins [BR:
pflv03036
]
114565507
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114565507
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
114565507
Chromatin remodeling factors
BAF complex
114565507
PBAF complex
114565507
GBAF(ncBAF) complex
114565507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
114565507
NCBI-ProteinID:
XP_028449403
LinkDB
All DBs
Position
2:complement(21457804..21483198)
Genome browser
AA seq
1664 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGSPGSSHSMMGPSPGPPSSGHSQPGPSGYGQD
NMHPLHKPMESMHEKGMSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHSPLGGS
DHSSPVPSNGPPSGPLMPSSSSSSSGGPGSAPTPLDGPSGEQHTLGPNNRPGPPGSSGPG
PSPVSTLGSGLESGVSPGPGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAV
QGKRPMPGMQQQSMSSLAPGPGGGPVGGPVGPVPVPGPMGSGYSRAHGMMGPNMPPPGPS
GTPAGMQGQNPNGPPKCWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPSVPPAASPVM
PPQTQSPGQPTQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREFRLQARITHRIAELE
NLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMHRDTALETALDAKAYKRSKRQS
LREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKMQKLTKAVAT
YHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE
LVRAHKAAQALKEKKKKKKKKKKLENAEGPTPVMGPDGEPLDETSQMSDLPVKVIHVDSG
NILTGLDAPRAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQPSATQVEEKKK
ITDPDCEDVSEVDVRHIIENAKQDVDDEYIGAAFARGLQSYYSVAHAVTEKVEKQSSLLI
NGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMENKRLNGPYLIIV
PLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQVL
AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLP
TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE
KVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPY
MFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKVLLFCQMTSLMT
IMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADT
VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTINSVEEKILAAAKYKLNVDQKVIQ
AGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRINEEDEVPDDETVNQMIARSEEE
FDQFMRMDLDRRREDARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSR
QRKEVDYSDSLTEKQWIKSVFPVQAIEEGTLEEIEEEVRHKKTTRKRKRDRDLDLPGPSS
SSGGRGRGDKDEDGKRQRKRGRPPAEKLSPNPPALTKKMKKIVDAVIKYKDSASGRQLSE
VFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLERDVMLLFQNAQTFNLEG
SLIYEDSIVLQSVFTSLRQKMEKEEESEGEESDEEEDELEEGSETESRSVKVKIRLGKKD
KGGDRGKGRSRRSGRSRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaccagatccccccatgggaggcacccctcgcccaggtccttcccctggaccg
ggtccctcccctggggctatgctgggctccccaggctcctctcacagtatgatgggcccc
agccctggccctccatcctcgggacactcccagccagggccctctggatatggccaggac
aacatgcaccctctgcacaaacccatggagagcatgcatgagaagggcatgagtgaggag
agccgcttcagccagatgaagggactatctatgagacagggtgggcacagtggtatgggc
cccccacccagtcctctagaccaacactcgcaaggataccactctccattagggggctct
gaccactccagccctgtcccttcaaatggtcccccctctggacctcttatgccatcgtcc
tcttcctcctcctccggtggtcccggctctgcccctacacctttagatggccccagtgga
gagcaacacactcttggtcccaataaccggcctggccctccaggtagctccggcccaggc
cccagccctgtctccacccttggatctgggcttgaatctggagtctctccaggccctgga
ggtcctggtggccctactccctttaaccagaaccagcttcaccaactcagagcccagatc
atggcttataagatgctggcccgtgggcagccgctgccagaccacctccaaatggctgtc
caagggaagaggcccatgcctgggatgcaacagcagtccatgtccagtttggctcctgga
cctggaggcgggccagtaggtggaccagtaggaccagtaccagtgcctgggccaatgggc
tcaggctacagtcgagctcatggaatgatgggtcccaacatgcctcctccaggcccatcg
ggtactccagctggaatgcagggacaaaacccaaatggacctcccaagtgctggccagaa
ggccccatggtgaatgcagcagccccctccaacgcaccccagaagcttattccccctcag
cccactggtcgaccctctcctgccccgccttcagttccccccgctgcctccccagtaatg
cctccacagactcagtcccccggccagccgacacagcctactcccatgatgccttaccat
gccaagcagaaccgcattactcccattcagaaaccctgtggactcgacccggtggagata
ctgcaggagagggagttcaggttacaggctcgtatcactcatcgtattgctgagctggag
aacctgccgggctctctggctggtgatttacgtaccaaagctactatagagctcaaagcc
ctccgactgcttaacttccagagacagctgcgtcaagaggtggtggtgtgtatgcatcgt
gacacagctctagagactgcccttgatgccaaggcctacaagcgaagcaagcgtcagtcg
ctgcgagaggcgcgcatcacggagaaactggagaaacagcagaagatcgagcaagagcgc
aaacgcaggcagaaacatcaggagtacctcaacagcatcctgcagcacgccaaagacttc
aaagaataccaccgctccatcacaggcaaaatgcagaaactgaccaaagctgtggccacc
taccatgccaatactgaacgggagcagaagaaagagaatgagcgcattgagaaagagagg
atgaggaggcttatggctgaggatgaggagggctatcgtaaactgattgaccagaagaag
gataagcgcctggcctatctgctgcagcaaactgacgagtatgtcgccaacctcaccgag
ctggtcagagctcacaaagctgcgcaggccctcaaggagaaaaagaagaagaagaagaaa
aagaagaagttggagaatgctgagggtcctactcctgtcatgggtcctgatggcgagcct
ctcgatgagacgagtcagatgagtgacctgcctgtgaaggtcatccacgttgacagtggg
aacatcctgacaggactggacgctccaagagctggacagctagagacctggctggagatg
aaccctggttatgaggtggctcctcgctcagacagtgaagacagcgaggaggaggaagag
gaggaggaggaagaggaggagcctcagccatcggctactcaggtggaggaaaagaagaag
attacagaccctgactgcgaagacgtgtcagaggtggacgtccgacacatcattgaaaat
gctaaacaggacgtggatgatgaatatatcggtgcagcgttcgcccgaggcctccagtct
tattattctgtggctcacgctgtcacagaaaaggtggagaaacagtccagtttgctaata
aacggacaactcaaacagtatcagattaaaggtctggagtggctggtttccctctacaac
aataatctgaatgggatcctggcagatgagatgggtctgggaaaaaccatccagactatt
gccctcatcacgtacctcatggagaacaaacggctcaatggtccctacctcatcattgta
cccctctcaactctttctaactgggtgtatgagtttgacaagtgggcaccgacagttgtg
aaagtgtcctacaaggggtctcctgctgccaggagagcctttgtcccccaactgcgcagt
ggcaagtttaatgttttactcacgacttacgagtacatcatcaaggataaacaagtactg
gccaagattcgttggaaatacatgatcgtggacgaaggccaccgtatgaagaaccaccac
tgtaagctgacccaggtcctgaatacccactacctggccccacggcgagtcctcctgaca
ggaacgccgctgcagaacaaactacctgagctctgggcgttgctaaacttcctcctgccc
accatcttcaagagttgcagcacctttgagcagtggttcaacgcccctttcgctatgact
ggagagaaggtggaccttaatgaagaggagaccatcttgataatccgtcgtctccacaaa
gtacttcgccccttcctgttacgcagattaaagaaggaagtggaggcacagcttccagag
aaggtggaatatgtgatcaagtgtgacatgtcatctcttcagagggtgctgtacaggcac
atgcaggccaagggggtcctgctcactgatggatcagagaaggacaagaagggtaaaggt
ggcacaaagacgctgatgaacaccatcatgcagctgaggaagatctgtaaccacccttac
atgttccagcagatagaggaatctttctctgaacatttaggattctctggtgggatagtc
cagggtcctgacctgtatcgggcatcaggaaagtttgaggtgttggatcgaatcctgcca
aagctgagagccacaaaccacaaagtgctgctcttctgtcagatgacctcactcatgacc
atcatggaggactactttgcctatcgcagcttcaagtatctgcgtctggatggcactaca
aaagctgaagatagaggaatgttactgaagacattcaatgaaccaggatcagagtacttt
atcttccttctgagcacaagagctggaggcctcggcctaaatttgcagtctgccgacact
gtggttatttttgactctgactggaacccacatcaggacttgcaggctcaggacagagcc
caccgtatcggtcaacagaacgaggtgcgtgtgctacgtctttgcacaatcaacagtgtt
gaagagaaaatcctggctgctgccaagtacaaacttaacgtggaccaaaaggtcattcag
gctggcatgtttgatcagaagtcttccagccacgagcgcagggccttcctgcaggccatc
ctggaacacgaggagcaagacgaggtctggggtcaggaagtctgtctacgcattaatgag
gaggatgaggtgccagatgatgagacggtcaaccagatgattgccaggagtgaggaggag
tttgaccagttcatgcgtatggacctagacaggcgtcgtgaggatgcccgtaacccacgg
cgaaaacctcgtctgatggaggaggacgagctgcccacttggatcatgaaggacgacgct
gaggttgaacggctgacctgcgaggaagaggaggagaaaatgtttggacgaggttctcga
cagcggaaggaggtggattacagcgattcattgacggagaagcagtggatcaagtctgtg
tttcccgtgcaggcgatagaggagggcacactagaggagatcgaggaagaggtacgtcac
aaaaagacgacccgcaagaggaagcgtgaccgcgacctggatctcccaggtccctcctct
tcctcagggggacgaggtcgaggggacaaagatgaagatgggaagaggcagaggaagagg
ggacgaccacctgctgagaaactctcccccaacccccccgccctcacaaagaagatgaag
aagatcgtggacgctgtcatcaagtataaagacagcgccagtgggcgtcagctgagcgag
gtgttcatccagctgccgtctcgaaaagagctgccagagtactacgaactgatccgcaag
cctgtggacttcaggaagatcaaggagaggattcgaggtcatcgctatcgcagtctgggt
gacctggagagagacgtcatgctgctcttccaaaacgctcagaccttcaacctggaggga
tcactgatatatgaagactccatcgtcctccagtcagtgtttaccagtttgaggcaaaag
atggagaaggaggaggaaagtgaaggagaggagagtgatgaagaggaagacgagctggag
gaaggatcagagactgaatctcgctcagtgaaagtgaagatccgtctgggaaagaaggat
aaaggtggagatcgagggaagggtcgcagcagacgatcaggacgcagcagagccaaacct
gttgttagtgatgacgactctgaggatgagcaggaagaggagcgctcccccagtgccact
gacgaggagtcctga
DBGET
integrated database retrieval system
