Perca flavescens (yellow perch): 114565693
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Entry
114565693 CDS
T07494
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114565693 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114565693 (exosc4)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114565693 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
114565693 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114565693
NCBI-ProteinID:
XP_028449693
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All DBs
Position
12:complement(15501899..15504069)
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AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEIRG
ARSRIRHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALLQMDARLHQDHLESLIEAAMTACKGVSKVLDEVVRQHLQEVS
VLSGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctggaactgttgtctgaccagggataccgtttagatggaagaaaagccacc
gagctgcggaaggttcaggcccgaatgggtgtgttcgctcaggcggacggctctgcgtat
ttagagcagggaaacacgaaagctctggctgtggtttatggtccgcacgaaatacgaggt
gcacgcagccgaattcgtcatgatcgagctgttatcaactgtcagtacagcatggccaca
ttcagcacagcagagaggaagaggaggccacacggagaccgcaagtcaactgagatgagc
ctccacctcaagcagacgtttgaagctgctgtgatgacccagctatacccacgctctcaa
atagacatctatgtcaagattctgcagtcagacggaggtaactacagtgtgtgtgtaaat
gctgccactctggcggtgattgatgctggcatccccatgcgggactacgtgtgtgcctgc
acggtcgggtttgtggatgagacgcccctcgctgacctttgctatgcagaggaaagtgga
ggagtaagttctctggccttagcactgctgccccggggcggacagatcgctctgctgcag
atggacgccagactacatcaggatcacttagagtctctgatcgaagctgccatgacagct
tgtaaaggagtgagcaaggtgctggatgaagtggtgcgacaacatctccaagaagtttct
gtgctctctggagagtga
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integrated database retrieval system
