Perca flavescens (yellow perch): 114565826
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Entry
114565826 CDS
T07494
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114565826 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114565826 (herc3)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114565826 (herc3)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
HECT type E3
114565826 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
114565826
NCBI-ProteinID:
XP_028449906
LinkDB
All DBs
Position
2:28061419..28087304
Genome browser
AA seq
1041 aa
AA seq
DB search
MLCWGNAKDGQLGIAMERDPVFEPRNCHVFSGRGLKEIACGGQHSMFLLHDGSVYTCGSN
SCGQLGHNKPGTSPELVGALDTQTITMMSSGRAHSMAVNEQGQVFAWGAGEGGQLGLGTA
EAAVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPGRLLP
YPLKSLAGIPFAQITTGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVHISCGEEHTAALTKDGGLFTFGEGSSGQLGHGSTNDELLPRRVVELMGSEVSQITC
GRHHTLAFVPSSGVVYAFGCNSHGQLGIGIRGDARSPLPVKARTGNVHCTVTKIISGGDH
SFLLYSNDQSYVPPEDFRVINVSKSISPINYERLNSWRLKLMYSTDSSVTKDIIIQLSST
ACWNGSFLDESDDTHFKTNPKIPGIDLDSVRKLFETLSKPAFSGLLEQATKSFESMMIPQ
LPRSPPDVEAMRIYLILSEYPALMDSKNYIRLTIPLAMAILRLDANPGKVLDNWWYLLDN
SVFTRMVDMYKSIVVFMLTGGKALLVPVFYENYLVATLRLLEKLHQVNLRANHVEYNHFY
IPDITSLVDIQEDYLKWFLSKADIKAGSIPRSQSDHPAVNLCAYPFILNARAKTTMLQTD
AELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRDHLVSDTLRELTMYSDVDLKK
PLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTYYKESNLLWFSDKCFVEQNWFH
LIGIICGLAIYNSTVVDLHFPLVLYKKLLNVPSKLEDFKELSPTEARSLQQLLDYEGGDV
EETFLLNFAITRENYGMTEVKELIPGGESISVDKNNRKEFVGAYLRYVFSDSVSEQYSAF
SSGFLKVCGGDILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTVRLFWEVF
HEFPLEKKKQFLLFLTGSDRIPIHGMESLRIIIQSTTAEEHYLPVAHTCYNLLDMPRYQT
KEILCRRLTRAVEQYEGFSLV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaaaggatggacagttgggtattgctatggagagggaccct
gtgtttgagccaaggaactgtcatgtgttcagtggcaggggactgaaagaaatagcctgt
ggagggcaacactcaatgttcctgctgcatgatggtagtgtgtacacatgtggttcgaac
agctgtggacaactgggccacaacaaaccagggacttccccagagcttgtaggagctctg
gatactcagacgataacaatgatgtcgagtggtcgggcccattcaatggcggtgaatgaa
cagggtcaagtgtttgcgtggggagctggtgaagggggccagcttggtctggggactgca
gaggcggctgttcgaataccaaggttggttaaaaggctgtgtgaccaccggatctctcaa
gtaatgtgtgggaatcagcactgcgttgcactttctagagatggccagctgttcacgtgg
ggccagaacaccagcggtcagctcgggctggggaaaggagagcccggcaggttgctccct
tatcccctgaagtctctggctggtattccctttgcacagataaccaccgggggagaccac
agctttgctctctccttgtccggagctgtatttggttggggcaagaacagagctggacaa
ctgggtctcaatgataaacaagatcgtgctgttccgtgccacataaaatttttgagatct
caaaaagtcgttcacatcagctgtggagaggaacatacagcagccctcacaaaggatggc
ggcttatttacatttggtgaaggctcgtcgggtcagctgggtcatggctccaccaatgac
gaacttttacccagacgagtggtggagctcatgggctctgaggtgtcccagatcacctgt
ggcaggcaccacacgttggcctttgtgccttcctctggtgtggtgtatgcgtttggttgt
aacagccatggccagctgggcataggaatacggggggatgctaggagcccattacctgtc
aaggccaggactggaaatgtccattgtacagtgaccaaaatcatcagtggaggagaccat
agcttcttattgtactctaatgaccagagttacgtccccccagaagacttcagagtgatt
aatgtcagcaaatcaatctccccaatcaattatgaaagattaaattcatggcggttaaag
ctgatgtacagcacagattccagtgtcacaaaagacatcataattcaactctcctctacg
gcttgttggaacggcagctttttggatgaaagtgatgatacccacttcaaaaccaaccca
aagatcccaggcatcgatctcgactctgtcagaaagctgtttgagacgctaagcaaaccg
gctttctctggacttctggagcaggccactaagagttttgagagtatgatgatcccccag
ctgccgcgctcccctcctgatgtcgaggccatgaggatttacctcatcttgtccgagtac
ccagccctgatggactctaagaactacatccgcctcactatccccctggcaatggccatc
ctccggctagacgccaaccccggcaaagtattggataactggtggtacttattggacaac
agcgtgttcaccagaatggtcgacatgtacaagagcattgttgtgttcatgctaacggga
ggcaaggcgctgctcgtaccggtgttctacgagaactatttagtcgccacgctgaggctg
ctggagaaactccaccaggtaaatttaagggccaaccatgtggagtacaaccatttttat
atcccagacatcaccagcctggtggacatccaggaagactacctcaaatggtttctgagt
aaagctgacattaaagcgggatcaatcccccgttcacagagtgaccatcccgcagtgaac
ctatgtgcctatccgttcatactgaacgctcgagccaagacaaccatgctgcaaacagac
gctgaactgcaaatgcagatggcagtaagcggtgcaaacttacacaacgtctttatgctg
ctcacgctggaaccccaccttgctaggaacccttacttggtgctccatgtgcgcagggac
catttagtaagtgacacactacgtgagctcaccatgtactctgatgtggacctcaagaaa
ccgctcaaggtgatctttgatggagaggaggccgtggatgcaggtggagtgactaaagag
ttcttcctgctgctgttaaaggagctgatggatcctgtatatgggatgttcacttattac
aaagagtccaacctgctgtggttctcagacaaatgttttgttgagcagaactggtttcac
ctgatcgggatcatctgcggtctggccatctacaactccacagtggtggacctccacttc
ccactcgttctctacaagaagctgctcaatgtgccatcaaagctggaggacttcaaggag
ctctcccccaccgaggccaggagtctacaacaacttctggattatgaaggaggtgatgtg
gaggagacgtttcttctcaactttgctatcaccagagagaactacgggatgacagaagtc
aaggagctcattcctggaggagagagcatcagtgtggacaaaaacaacaggaaggagttt
gtgggggcctacctgcgctacgtgttctcagactcggtgagtgagcagtactcggccttc
tcctctggcttcctgaaggtgtgcgggggggatatcctgtcgctgttccagccctctgag
ctgatggccatggtggtcggcaacaacaactacaactgggaggagatggaaaagaatgct
gtttacaaaggggaatacacagccactcatccaacagtcagattgttctgggaggttttc
cacgagttccctctggagaagaaaaagcagttcttattgttcctgaccggcagcgaccgt
atccccatccacggcatggagagcctgcgtatcatcatccagtccaccacagcggaggag
cactacctgccggtggcccacacctgctacaacctgctggacatgccccgctaccagacc
aaagagatcctgtgtcgtcgtctcacgcgggctgtggagcagtacgagggcttcagcctg
gtctga
DBGET
integrated database retrieval system
