Perca flavescens (yellow perch): 114565844
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Entry
114565844 CDS
T07494
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114565844 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114565844 (chd8)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114565844 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
114565844
NCBI-ProteinID:
XP_028449928
LinkDB
All DBs
Position
12:complement(24827782..24850080)
Genome browser
AA seq
2569 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFSQGSSDPVEEALKLALGQVDPPTEPELTVNAGLGV
SVAAPAIPDPAPVQVPTQQPVPVATDRTVTIAAAPTVAPVPAPTPINTVPQIQAQTTIPI
VSSTSVVTSSTVLLSSPLTVSSSPITTTATTQQLTQITHQFTPQQLAAITQQAGGKIVIL
KGPQGQAQVLQTVSGATGQTSGKVIRVLSGTPLKPGMSILQGGTVLNQASPGQAQVKVGA
AGVQRLMQSPNGPVKQMVLTSMPQQTQGQTVQVQIPAQTQMAQGQTQVQAQATQIQVQTQ
GQVQLQPAMQAQTQGGEAKRITLVLQQPSQAGSAATAGQAQQQLTQVQQVQTAQGGQQQH
QIPARLVLGQLPGGKLVLQGSQLAALTQARAAGQAGGQPKVLTIQLQVQQQPNQQGGIKY
QLVSGAGAGSPQVLQISQGQGGQRVAVPLKMLLQPQTSSASSAGGTVSVVKVINTSAAGP
STTTTTPSQAIRITKAPGEPASVRRVEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQ
DELPATQTSPEVGGTVTVVTAAKKKSSGGGNKKKSPVAGGTTPKSTGGQCKSKVKTPGGT
TGVAGGTVIPGAGNKSKSKTKTNTITLVGAKKRKRNASSDHSDGELSPASPTALDDDLIT
KRRSNRVVKRKKYTEDLDIKITDDEDEQEDVDVTTTAAAVASISGGSAAQLKQELELDVE
GQPSMQFFVENPSEEDAAIVDKVLALRLTKKEVCPGQYTTVEEFFVKYKNYSYLHCEWAS
LAQLEKDKRIHQKIKRFKTKHAQMRHLFQEDEEAFNPDYLEVDRILDVSHSVDKDNGEPV
IYYLVKWCSLPYEDATWELKEDVDEGKVEEFKKIQNRQPRLKRTPRPSASSWKKLEETRE
YNNGNILREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLAEEYDAGVQGPFLV
IAPLSTITNWEREFSTWTDMNAIVYHGSLASRQMIQQYEMYCKDDKEHLIPGAYKFDALI
TTFEMVLSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTV
EELFSLLHFLEPTQFPSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
QETIIEVELTDIQKKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLING
AEEKIVAELREVYDPMAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLD
ILEDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT
CVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQ
SMSGNKESNVNGQIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTI
TIESEGKGSTFSKASFVASENRNDIALDDPEFWQKWAKKADIDMDSMNRKNTLVIDTPRV
RKQTRQYSTLRGEGGDLSDLDSDDEYPPANSRQSRASRRSDRHSGGGYGRTDCFRVEKHL
LVYGWGRWKDILSHARCKRRLSERDVETICRVILVFCLLHYRGDENIKSFIWELITPPEN
GREPQTLLNHSGLSIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPDTLLLDDSYRKHLKH
QCNKVLLRVRMLYYLKQEVIGEHADAVLKGADSRDVDIWMPEMEQQEVPAGWWDTEADRS
LLAGVFKHGYEMYTTMRADPCLCFLERAGRPDDKAIDAEQHTGDGELGDDADYDKYSEDP
EFKPASRHAKDLFEEPDSMNVDDEISVEDKVGPVISESFSSQSGACDWPSSSSLTARLRR
LITAYQRSYRQEQLKMEAEAKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVS
TFGVEKIKKELGLPEGGDSDFDWNRFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLRPG
RGEDLAELSQTVAPITEERASRTLYRISLLRRLRERVLPHPSLEERLPLAPTSSELPAWW
NIPEHDRQLMLGAALHGVSRTELSIYSDPQFTFSQAREQFIQTQQAPPPPPQAPPIMPLS
QPKTEEDVPIVKEEGAEEDARLLGGEISVALQSTPLSQHEGKARGPGWSLKRSRGRVGKT
GGRKGEGGSDSDSDSDSGSSSSGRSGSSDESAESEEEVERAGMKLCDVDEENSLLSMTPS
QDGILPPDPLRVDWPKDRVLINRLDSLCTLMLTGQWPSGRRYMPEAPLNPSSELAGDEMA
YTRVIRKPSSTPGVPGEDGEDGEFTVKLLKEEGLKLTFSKQALMPNGSGGESSGRKRRKD
QELSDPDGLNDPLERTPRRRDPPTWLKENPDYEVEGDMLELLVNRSKRKRRRRADKALTG
SEKVKVINMRTGKKVGAAFCPMLQDLREYLEENPDNAVAPDWSETVRNSGFLPETLLHRL
LTEHSEIPKKSRRRHHHHHHHHHHTPEPSSEVGLDGVEEETLVSDGAYMMDEEDLETSHH
FLTSPDFDVKMEGGDSLSQGDYDSSDQEALLDDVIIAQKDSDSSSSSED
NT seq
7710 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgaggacacacccctgtttaacctggatgcccta
cctgatgactctttctctcagggctcctcagaccctgtggaggaggcacttaagctggcg
ttgggtcaagtggacccaccaaccgaacctgagctcacggtcaacgcaggccttggtgtt
tctgtagcagctcccgccattccggaccctgcccctgttcaagtccccacacagcagcca
gtgccagtggcgactgaccggactgttaccatagctgcagctcccactgtagccccagtt
cctgctcctaccccgattaatactgtacctcagatccaggcccagaccaccatacctatt
gtcagcagcaccagcgtggtcaccagtagcactgtcctgctgagttcacctctgactgtt
tccagctccccaatcaccaccaccgccaccacgcagcagctcacacagataactcatcag
ttcactccacagcagttagctgccatcacacagcaggccggtggtaaaattgtcattctc
aaaggtccccagggtcaagcccaggtgctgcagactgtatcaggagccacaggccagacc
agtggaaaggtaatccgtgtgttgtcgggcactcctcttaaacctggcatgtccatactg
cagggggggacagtcttgaatcaggcgagcccgggacaagctcaagtcaaagtgggtgca
gcaggggtgcagaggctgatgcagtctcccaatgggccagtgaaacagatggtgctgacc
tccatgccccagcagacgcaaggccagacagttcaggtgcagatccctgcccaaacacag
atggctcaaggccagactcaagtccaggcccaagctactcagatccaagtccagacccaa
ggccaggtgcagctccagccagccatgcaggcccaaacacagggtggtgaagcaaagcgg
atcactctggttctccagcagccctcccaggctggctctgctgcaacagcgggtcaagcc
cagcagcagctcacacaagtccagcaggttcagacagcccaagggggccagcagcagcat
cagatcccagctcgactagtgctggggcagctccccggaggcaaactggtgctccaggga
agccagctagcagccttgacccaggctcgggctgcaggccaggctggagggcagcccaaa
gtcctcacaattcagctgcaggtgcagcagcaacctaaccaacaaggaggaattaagtac
cagctggtctcaggagctggcgctggcagcccacaggtgttgcagatctcacagggccaa
ggaggacagagagttgcagtgccactcaaaatgctactgcagccacagacaagctcggca
tcctcggctggcggcacagtatctgtggtaaaggtcatcaacacgtctgctgcaggcccc
tcgactacaaccaccacgccgtcccaggccatccgcatcaccaaggcccctggcgagcct
gcctctgtgcgacgggtggagatcctctgcaagcaggagaaagcaaaccgtattgtggct
gaggctatagcccgggccaaagcacgtggggagaagaacctgcccagagtcctcaaccag
gatgagcttccagccacacagacctccccagaagtggggggcactgtgactgtggtgact
gctgctaagaaaaagtccagcgggggaggaaacaagaagaaaagtcctgtagctggaggg
acgacgcccaaaagcactggggggcagtgcaagagcaaagtgaagaccccaggaggaaca
actggagtggctggaggcacagtaatacctggggctgggaacaagagcaaaagcaagact
aagacaaacactattactctagtgggagcaaagaaaagaaagagaaatgcatcctcagac
cactctgatggagagttgagccctgcctcgcctactgctctggatgatgacttgattacg
aagaggcgctccaatcgtgtggtgaagaggaagaagtacactgaggacctggatattaag
ataacagatgatgaagatgagcaggaagatgtagatgttactacaactgcggcagctgtg
gcctccatcagtggcgggagtgcagcgcagcttaaacaggagctagagctggatgttgaa
ggacagcccagcatgcagttctttgtggaaaacccaagtgaggaggatgctgccattgta
gacaaagttctggctttgaggttaaccaagaaggaggtgtgtccgggccagtacaccact
gttgaggaattctttgtaaaatacaagaactattcctacttacattgtgagtgggccagt
ttggctcagctggagaaagataagaggatccatcaaaagatcaagaggtttaagaccaag
cacgcacagatgaggcacctcttccaggaggatgaggaggcttttaacccagactattta
gaggtggacaggatcctggacgtttcccacagtgtggacaaggacaatggcgagcctgtt
atctactacttggtgaagtggtgctctctgccttatgaagacgccacttgggaactgaag
gaggacgtggacgagggcaaagtcgaagaattcaagaagatccaaaaccgacaacctcgc
ctaaaacgaacgccacggccgtctgccagttcatggaagaagttggaggagaccagagaa
tacaacaatggcaacatacttcgagagtaccaacttgaaggagtcaactggctgctcttc
aactggtacaacaggcagaactgtatcctggcagatgagatgggtctgggaaagaccatc
cagtctatcgcactgctggctgaggagtatgatgctggcgtccaaggccctttcctggtc
atcgctcccctctccaccatcaccaactgggagagggagttcagcacgtggaccgacatg
aacgctatagtctaccacggcagcctggccagccgacagatgatccagcagtatgagatg
tactgcaaggatgacaaggagcacttgatcccaggggcgtacaagtttgacgccctcatc
acaacatttgagatggtgttatctgactgcccagagctgagggagatctcctggcgttgt
gtgatcattgatgaggctcaccgcctcaagaatcgcaactgcaaactgttggacagcttg
aagatgctggatctggaacacaaagtgttgttgaccggcactcctctccagaacactgtg
gaggaactcttcagtctgcttcatttcctggagcctactcagttcccttctgagactgaa
ttcctcagagactttggagacctcaaaacagaggaacaggttcagaagctgcaggccatc
ttaaaacccatgatgttacgaaggctcaaagaggatgttgagaaaaacttggcacccaaa
caggagactatcattgaggttgagttgacggatatccagaagaagtactaccgggccatc
ctggagcggaacttcagtttcctcagtttaggtgcaaacagtaacagcaatgttcccaac
ctgctcaacactatgatggagctacgcaagtgttgcaaccacccctacctcatcaatggc
gcggaggagaagatcgtagctgagctgcgggaggtgtatgaccccatggcgcccgacttc
catttgcaggcccttattcgctcggccggcaagttggtgctactagacaagctgctgcct
cgcctcaaggctggtggccacaaagtgctcatcttctcccagatggtgcgttgcttagac
attctggaggactacctcatcaacaagagatacctttatgagcgaattgatggcagagtg
cgtgggaacttacgacaagctgccatcgatcgcttcagcaagcctgactcggatcgcttt
gtcttcctgctgtgtacccgtgctggtggcctgggtattaacctcactgctgctgacacc
tgtgttatatttgactctgactggaaccctcaaaatgacctgcaggctcaagcacggtgt
catcgtattggccagtctaaggcggtcaaggtctaccgtctgatcacgaggaactcttac
gagagggagatgctggataaagcaagtctgaagcttggcttggaccgtgccgtcttgcag
agcatgagtggcaacaaagaaagtaacgtcaacgggcagatccagcaattctccaagaag
gagattgaggacctgctgaggaagggagcctacgctgccatcatggatgagaatgatgaa
ggcagtcgcttctgcgaggaggacatcgaccagatccttcagcgtagagccaccaccatc
accatcgagagcgagggcaagggctccacgttctccaaagccagctttgtggcctctgag
aaccgcaatgacattgccctcgatgacccagaattctggcagaagtgggccaagaaagcc
gacatagacatggactccatgaaccgaaagaacaccctcgtgattgacactcccagagtt
cgcaagcagacccgccagtactccactttacgaggtgaaggtggagacctgtctgatctg
gacagcgacgatgagtatccaccggccaattccagacagtcgcgtgcctcgcggcgctct
gaccgccacagtggagggggttacggccgcactgactgtttcagggtggagaaacacctg
cttgtctatggttggggtcggtggaaggacatcttatcccatgctagatgtaagcgtcgt
ctgagtgaacgtgacgtggagacgatctgccgtgtcatcctggtcttttgtctgctccac
tatcgtggggatgagaacatcaagagtttcatctgggagctcatcacaccgccagagaac
gggcgtgaaccccaaacactactcaaccactctggcctgtctatacctgttcccagaggc
aggaagggtaagagggtaaaggcccagagcacatttgatgttcagaaggtggagtggatc
cgcaagtacaaccctgacaccttgcttctggacgacagctaccgcaaacatctcaagcac
cagtgcaacaaggtgttgctgagggtgcgcatgctctactacctgaaacaggaggtgatt
ggcgaacatgccgacgctgtcctgaaaggggctgacagcagggatgttgatatctggatg
cctgagatggagcagcaggaggtccctgcaggttggtgggatactgaggcagaccgctca
ctgcttgctggcgtatttaaacatggttatgagatgtacaccacaatgcgggctgatcca
tgcctctgcttcctggagagagctggtcggcccgatgataaggccattgatgccgagcag
cacactggtgatggcgagctgggagacgatgctgactatgataagtactcagaggacccg
gagttcaagcctgcgtcaagacacgccaaagatcttttcgaggagcctgactccatgaac
gtggacgatgagatttctgtggaagacaaggtggggccagtgatctccgaaagcttttcc
agccagagtggtgcatgtgactggccctccagctcatcacttacagcgcggttgcggcgg
ctgatcaccgcttaccaacgtagctacaggcaggagcagctgaagatggaagccgaggca
aagggcgaccgcaggcgcaggcgttgcgaacaggccagcaagctgaaggagattgcacgg
caggagcgccagcagaggtggacacgtagggaagaatgtgacttctatcgggtggtatcg
acttttggtgtggaaaagataaaaaaggaactaggtcttccggagggaggagattcagat
tttgactggaaccgcttccgtacctttgctcgtctggataaaaaaactgatgagagcctc
agccgatacttccgctcttttgttgccatgtgccggagagtttgccacctgcgcccaggc
cgtggtgaagatttagcagagctgtcccagactgtggcccccatcactgaggagcgtgct
tcccgtaccctttaccgtattagcctcctgcgtcgcctccgtgagagagtcctgccccac
ccatccctggaggagcgtctgcctctggcgccgaccagctccgagctgcccgcttggtgg
aatatcccagaacatgatcgtcagctgatgctgggcgccgcactgcacggtgtcagccgc
actgagctctccatctactcagacccacagttcaccttcagccaggctcgggaacagttc
atccagacccagcaggccccaccccctccacctcaggcaccgcccatcatgcccctcagc
cagccaaagactgaggaggacgtgcccattgtaaaggaggagggagcagaagaggacgcc
cggttgcttggaggtgaaatcagtgttgccctgcagagtacgcccttgagtcaacatgaa
ggcaaggcacgggggccaggctggagcctcaagaggagcagggggagggtcggaaaaaca
ggaggaaggaagggtgagggagggtctgattctgattcagattctgattcaggctcatca
tcatccgggcgatcgggcagcagtgatgaaagtgcagagagtgaggaagaggtggaaaga
gcaggcatgaagctgtgtgatgtggatgaagagaatagtttactctccatgactccatct
caggatggcattcttcctcccgatcctctccgagtggattggcccaaggaccgtgtgttg
atcaaccgtctggacagtttgtgtacgctgatgctgactggtcagtggccctcagggcgg
cgctacatgcctgaggcgccgctcaacccgagctcagagctggcgggagatgagatggcc
tacacaagggtaatccgtaaacccagcagcacgcctggtgtccctggggaagatggagaa
gacggagagttcacggtcaagctccttaaggaggaggggctgaagctgaccttctctaag
caggccctgatgcccaatgggtcagggggagagagcagtggtcgcaagaggcgcaaggac
caagagttatcagacccagatggactcaatgatccactggagcgtactccgcggcgcagg
gaccctcccacctggttgaaggagaacccagattatgaggtggagggagacatgctggag
cttcttgtgaacaggagcaagaggaagaggaggaggagggcagataaagccctgacagga
agtgagaaggtcaaagtcattaacatgaggacaggaaagaaggttggagctgctttctgt
ccgatgctgcaagatctgagggaatatctggaggagaatcctgataatgctgtagcacca
gactggtctgaaactgttcgaaactcgggcttcctgcccgagaccctgctccaccgactg
ctgacagagcactctgagatcccgaagaaaagccgacgccgccatcaccaccatcatcac
caccaccaccacactccagagccctcctctgaggtgggcttggatggagttgaagaggag
actctggtctcagatggagcctacatgatggacgaggaggacctggagacctcccatcac
ttcctcaccagtccagactttgacgttaaaatggagggcggcgacagcctttcccaaggt
gactatgatagctcggatcaagaggcgctattggacgatgtcatcatagcacagaaggac
tctgactcctcatcaagctcagaggattga
DBGET
integrated database retrieval system
