Perca flavescens (yellow perch): 114565872
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Entry
114565872 CDS
T07494
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like
KO
K10654
tripartite motif-containing protein 55
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114565872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114565872
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114565872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
MTCP1
Sina_RING
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
114565872
NCBI-ProteinID:
XP_028449981
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All DBs
Position
12:complement(35332102..35349533)
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AA seq
445 aa
AA seq
DB search
MESLEKQLICPICLEVFTKPVVILPCQHNLCRKCANDVFQASNPYMTSRSGSTVTSGGRF
RCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQGSSSRPVPEEKLEQPMCETHAEERIN
IYCVSCSLPTCSLCKVFGAHKDCEVAPLDTVFHTQKAELTDCISMLVGNNERTQAIISQL
EETCTTVDENGRRQKSKVCETFDQLFCLLEERKGEMTLRINAEQEEKLDYIRGLSRKYSQ
HLEASAKLLETAIQTMDEAEMAVFLQTTKPLLQKMVEGSNTSHMEKLQLGYEKMDHFTAN
FSRQRRALMDVDFIKLDEDDDEEDEEEEEEALEVRGMASANQQPPLAPVQPTGVQLSTPP
TQRPSEAPPTQRSSQASPPQRPLEAPPTLTSQTRGSAPSKSLQATPPLPLPTASSAPQVQ
SDQQNESEDKDGPKHVFSFSWLNQK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggagagtctggagaaacagctgatctgtcccatctgtctggaggtgttcaccaagccg
gtggtgatcttgccctgccagcacaacctgtgcaggaaatgtgccaacgacgtgttccag
gcgtccaatccctacatgacgtcgaggagcggctccacggtgacgtccggcgggcgtttc
cgctgcccgtcctgccgccacgaggtggttctggaccgccatggcgtctacgggctgcag
aggaacctgctggtggagaacatcatcgacatgtacaagcaggggagcagcagcagaccg
gtccctgaggagaagttggagcagccgatgtgtgagacccacgctgaggagaggatcaac
atctactgcgtgagctgcagccttcccacctgctcgctctgcaaagtcttcggagcgcac
aaagactgtgaggtggcacctctggacactgtcttccacacgcagaaggccgagctgact
gactgtatctccatgctggttgggaacaacgagaggactcaggccatcatcagtcagctg
gaggaaacctgcacaacggttgatgagaacgggcggcgccaaaagtccaaggtgtgcgag
acatttgatcagctgttctgtctgctggaggagaggaaaggcgagatgacgctgcgcatc
aacgctgagcaggaagagaagctggattacatcagagggctgagcaggaagtacagccag
cacctggaggcctcggccaagctgctggagaccgccatccagaccatggacgaggccgag
atggccgtgttcctgcagaccaccaaacctctgctgcagaagatggtggagggcagcaac
acgtctcacatggagaaactgcagctgggctacgagaagatggatcacttcacggccaac
ttctcccgccagaggagagcgctgatggacgtcgactttatcaaactcgatgaagacgat
gatgaagaagatgaagaagaagaagaagaggcattggaggttagagggatggcctcagcc
aatcagcagcctcctctggctcccgttcagccaaccggtgttcagctctcaacgccgccc
acacagagaccctcagaggctccgcccactcagagatcctcccaggcttcgccccctcag
agacccttggaggctccgcccacactgacatcacagacgagaggctccgccccctccaaa
tccctccaggccacgccccctctgcctcttcccaccgccagctcagcccctcaggttcag
tctgatcagcagaacgagtcggaggacaaagacggacccaaacacgtcttctccttcagc
tggctcaaccagaaataa
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