Perca flavescens (yellow perch): 114565904
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Entry
114565904 CDS
T07494
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114565904 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114565904 (smarce1)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114565904 (smarce1)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114565904 (smarce1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114565904 (smarce1)
PBAF complex
114565904 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Pcf11_helical
Motif
Other DBs
NCBI-GeneID:
114565904
NCBI-ProteinID:
XP_028450039
LinkDB
All DBs
Position
2:35794406..35805798
Genome browser
AA seq
427 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPNTAGFVGYNPYSHLAYNNYRLGGSQSSNSRVTNSSGINIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVSAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAEDPD
DYDDGYSMKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATESFTNELKRLCCMKVEVDMEKISAEIAAAEEAARKRM
ADRDKDAGDRGAREAPTCVLAEEEKHICATHGNQSQQNSLSESSNKEGEDAESNTTDTPG
KPKASEELEAHPGSEEGASEDKESVPEGAMEEGTSDSNTGSETTSAQTEDAPTSEPSEGP
SRGRAAH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaccatcctatgcccctccccctccccctgcccctacaactcaaatgccc
aacactgccgggtttgtggggtacaacccatacagccatctggcctacaacaactacaga
ctgggagggagccaaagcagcaacagtcgggtaacgaattcctctggaataaatatccca
aagccacccaagccacctgataagccattgatgccatatatgagatatagtcgtaaggtt
tgggatcaagtaaaagcctccaatcctgatctgaagctatgggaaattgggaagataatc
ggtggcatgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagattgagtataatgagagcatgaaggcctatcacaactcgccagcctacctg
gcttacgtcagtgcaaaaagccgagccgaggcagctctggaagaggagagccgccaaagg
cagtccagactggacaagggcgagccctacatgagcattcagccagcggaggatccagat
gattacgacgacgggtattctatgaagcactcagctgcagctcgtttccaacgcaaccac
cgtctgatcagcgagatcctcagtgagagcgtagtcccggacgtacggtcggttgttacc
acggctcgcatgcaggtcctcaaacgccaggtccagtctttgatggtgcaccagagaaag
ttagaggcagagttgcttcagattgaagaccgccaccaggataagaaaagaaaattcatc
gaagccaccgagtcgttcactaatgagctcaaaaggctgtgctgtatgaaagtggaagtg
gacatggagaagatttctgcagagattgctgcagcagaagaggcagcccgcaaacggatg
gcagaccgtgacaaggatgcaggagacagaggtgcaagagaggcccccacctgtgtctta
gcagaagaagagaaacacatttgtgcaacacatggcaaccagtcccagcaaaattctcta
agtgaaagtagcaacaaagaaggcgaggatgccgaatccaacaccacagatacaccaggg
aagccgaaagcctcagaggagcttgaggctcatccaggcagtgaggagggggcgtccgag
gacaaggagagcgtcccagagggagccatggaggagggaaccagcgacagtaacacaggc
tcagagaccacctctgctcagacagaagatgccccgactagtgagccatcagaggggccc
agcagggggagagcagcccactaa
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