Perca flavescens (yellow perch): 114566366
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Entry
114566366 CDS
T07494
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
pflv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114566366 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
114566366 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114566366 (thoc2)
03041 Spliceosome [BR:
pflv03041
]
114566366 (thoc2)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114566366 (thoc2)
Spliceosome [BR:
pflv03041
]
Complex C
Other components
EJC/TREX
114566366 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114566366 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
114566366
NCBI-ProteinID:
XP_028450560
LinkDB
All DBs
Position
13:13151023..13177607
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGHDIRDIQAALYEICWQVVHGNLKL
ELVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKREHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPVDATIIEEHKRDISE
AKQIARKLVMVVLPSEKSEDKDKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWHNALSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVMHPLRSKRAPRPAESFE
DLRRDTFSMICYLGPHLSHDPILFAKIVRLGKSFMKEYQSDGRPDVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYTSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLLQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKTEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYEREVNKL
KVQIKAIEENPEIPLNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLSCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKGQKVHMVPENEFHHKEQPARSATPANQQNGPG
STGKPATSTSKTEEGTSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAIK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERVAREGKEKTPKADRE
KVKAEEKSGKDDKAKAGNGEPMEPSRDRDAIKESKSKEKGDRGAVAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHANYNSVSRSKSREREMEKKDSDN
TQGRSKEKKEDKDRKDKKRDHAVNDRETSQESKRKKDENGMNSTKNSKSASPSCDSPLSA
EKEKSKRSKSSSKEKAESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagtttgtacaactctgcaaagaacttacagaaaaaacagatcatggacatgacattaga
gacatacaggccgccttatacgagatctgctggcaagttgtacatgggaacctgaagttg
gagcttgttgccagcgtccttggggacatgatggaactccgagatgacatgccatcaatt
ttagcagatgttttcagtatactagatttagagactggtgcactggaagaaaaaaacaaa
cgtgaacattacacacaactggtgggagcatgtttgttttttgttcctgaggccatcctg
aaagagaggctggatccagaaacccttgaatctctaggacttataaaacaagcccatcag
ttcaatcagaagattgtaaaaatcaagactaaactattttacaagcagcagaagtttaac
ttgctaagggaggaaaatgagggctatgccaaacttatcacagagcttggccaagacctc
tcaggcaacatcaccagccaccttgtcctggagagcatcaagtccctcataggatgtttc
aacttggaccctaatcgtgttttggacatcatcctggaggtgtacgagagtcgatctgac
caagatgagttcttcctgtctctcatcaagtcctacatgtgtgagccactcaccctttgc
cacatcctgggctttaagttcaaattctaccaggagcccaatgaggaaacccccaagtca
ctttaccacattgctgctgccctgcttcaccataacctgatagagctggaagatctctac
gtacatcttatgccagtagatgccaccattatagaggaacacaaacgagatatctcagag
gccaagcagattgctcgcaagctggtcatggttgtgttgccctcagagaaaagtgaagac
aaagacaaggagaaagaaaaggaggaggagaagaatgaaaagccacctgataaccagaag
cttgggctgttggaagcgctgcttagaattggagactggcacaacgccctaagtattatg
gaccagatgccgtccttctatgctacttctcacaaggccattgcactggcactctgccag
cttgtgcacctgactgtggaacctctttacagaagggctggcctcccgaaaggggcaagg
ggatgtgtgatgcatccactgaggagcaagcgagcccctcggcctgcagagagcttcgag
gacctacgcagggacacattcagcatgatctgctacctaggtcctcacctctctcatgac
cctatcctcttcgccaagattgtgcgtctgggcaagtccttcatgaaagagtaccaaagt
gatggcagacctgatgtcaaagacaaaatggaaacattattgagttgtttcctgagcatt
gcagatcaggtcctactcccttctctttctctgatggagtgtaatgcttgcatgtctgag
gaactctggggtctctttaaactctttccctaccagcacaggtaccggttatatggacag
tggaagaatgagacatataccagccatccactgttggttaaggtcaaagctcagactgtg
gaaagggccaaatacataatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggaaaactgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccaatggtacgacaacctaatcgttccagtggtggactccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcatcattgaggctctggcaaatcccgagaaggag
aagatgaaacacgatgacaccaccatctcctcatggcttcagagcctggcaagcctgtgt
ggagccgtgttcagaaaatacccaattgagttggctggccttcttcaatatgtcactaat
cagctaaaagcaggaaagagttttgacctgttgatcctgaaagaggtggtgcagaaaatg
gctggcattgagatcacagatgagatgacctcagagcagttagaggccatgaccggaggg
gagcaactcaaagctgagggtggctacttcggccagatcaggaacactaagaagtcatca
cagcgtctgaaggatgcgctgctggaccatgaattggccttgcctctgtgtttactcatg
gcccagcaacgaaatggtgtggttttcttagagggtggagagaaacaccttaaacttgtt
ggccacctctatgaccagtgtcatgacacgttgttgcagtttggtggctttctggcctcc
aatcttagcactgaagactacattaagcgggttccctccattgacatcctttgtaaccag
ttccacactccacatgatgctgctttcttcctgtctcggccaatgtatgcccatcagatt
ttgtccaagtacgatgagctgaagaaaacagagaaaggcaaccggcagcagcagaaggta
cacaagtatgtggcagcctgtgaacaggtgatgacaccagtgcatgaggctgtagtgtcc
ctccatccagccagggtctgggacgatcttcgccctcagttctatgccaccttctggtcc
ctcaccatgtatgacctggccgttccacactctgcctacgagcgtgaggtcaacaagctc
aaggtccagatcaaggccattgaggagaacccggagatacccttgaataagaaaaagaag
gaaaaggaacgctgcactgccctgcaagaaaaactgcaggaggaggagaagaaacagctg
gagcacgtccaaagggttctacaccgtctcaaacttgagaaagacaactggttgttggca
aaatccacaaagaacgaaacaataacaaagttcctgcagctctgtctgttccctcgctgc
atcttctcttccatcgacgctgtgtattgtgcccgttttgtcgagctggtccaccagcag
aagacgcccaacttctgcaccctcctgtgctatgacagggtgttctccgccatcatttat
actgtggccagctgtacggagaatgagtctcaccgctacggacgcttcctctcctgcatg
ctagagacagtgacccgttggcacagcgaccgcgcaatctatgagaaggagtgcgtcaat
tacccaggattcctgaccatcttcagagccacaggcttcgatggcgggaacaaagcagat
caactggattatgagaacttcaggcatgtggtgcacaaatggcactacatgctgactaaa
gcttcggttcactgcctagagacaggagattacacccacatccggaatattctcatcgtg
ctcaccaagatcctgccctgctatcctaaggtcctaaacctgggccaagcgctggagtgc
cgtgtccacaagatctgcctcgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaggccagaaggtgcatatggtccccgagaatgagttt
caccacaaagagcagccagcacgcagtgccacacctgccaatcaacagaacggcccaggc
agcacaggcaagcctgccaccagcacaagcaagaccgaggaggggacgtcagaggatggt
gatcggggcaaggataaatctcaggggaccacaaagccggtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaatgggaacggtgctcttaacagcaccaaagccattaaa
gaacgagacgacaaagagaaaagtgggaaggagaaaaaagagaaaaaggaaaagacacca
ggcagcactcctgagaccaaggcggagaaccgtcgggagaagcagagagacgagagagca
gggaaggaggagcgggtggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaggctgaggagaagagcggcaaagacgacaaggccaaagccggcaacggggag
cccatggagccgtctagggatcgcgatgccatcaaggagtccaagagcaaggagaaagga
gacagaggagctgtggccgggtccctcaagtcaccagttcccagatcggagtcagccgaa
tcggagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgccaactac
aattcagtttcccggtccaagagcagagagagagagatggagaagaaagattcagacaac
acacaaggccgatccaaagagaagaaggaagacaaggatcggaaagacaagaaaagagac
catgctgtcaatgaccgtgagacgagccaagagtccaaacgtaaaaaggatgagaatgga
atgaattccaccaaaaacagcaagagtgcgagtccttcctgtgactccccgctttcagct
gaaaaagagaagagcaaaagatccaaatcttccagtaaagagaaggccgagtctgtgaaa
cctgagcgaacatcctctggaggaaaaaaggagtccagacatgacaaagagaaatctgaa
aagaaagagaagagggacagcagcggaggaaaggaagagaaaaagcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system
