Perca flavescens (yellow perch): 114566382
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Entry
114566382 CDS
T07494
Symbol
scaf4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114566382 (scaf4)
03041 Spliceosome [BR:
pflv03041
]
114566382 (scaf4)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114566382 (scaf4)
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
114566382 (scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114566382
NCBI-ProteinID:
XP_028450590
LinkDB
All DBs
Position
13:complement(17332259..17345215)
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AA seq
1101 aa
AA seq
DB search
MDAVNAFNHELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGSDKDVFGPRFTKNITGTFENLCLCPVEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSSSAAAPYTGSDDPGSSPPPAKEPVTAVTANSTTASAAQLQNS
DAFAAVAQLFQSTQGQQLQQMLQNFQQQPVKSDTNPQPPVHTSQTQAQNITTGLGTVTPQ
PPLPTQTAQQKAAFDKKLLDRFDYDDEPEIGEEMSSQASFMQQPPAFPQHMEHFKPSMMN
VLQGLSQQVPLPPNGQLQAYGLPPGQSFPVMMPPMGHALPGQTLPGSTGPPGFSGVYPAH
NAAQQQQDLSMDMDRSSMRDGRHGRRSHSGSRSPKRRRSRSNSRTRRSRHRRSRSRSRDR
RHHSPRSRSLERKEREKERERRQKGLPPPKSETLSICSTTLWVGQLDKRTQQQDVACLLE
EFGQIESINMIPPRGCAYIVMIHRQDAFRALQKLSRGSHKVNQKAIKIAWALNKGIKPDF
KQYWDVELGVTYIPWSKIREAQLEELKEGGILDVDTLSPEWSGVRKTIGHLEELNHNGRS
EPQQPEETQVLPGAAAAAPPAQVPLMQQPMVGVGSLQPPVFPGPIGMPLPSFPPGVPPPP
FIRPGFNPMQMPPGFPPPGTMPLGPPPPSKGGVEDPPLDPAGLGNRKNDEVLEGPNIFSN
QMGPMGNQLGGPLGSLQGGPPGNLQPPSGGLLGARPGIIPLQRPPVPPPPHMQRFPPPHG
PRPPHPNMPPMPPQMMPRGPHPQMMQHDPPPPKGGFGMLPPHNMRAPFPPHGHGPPPQGP
PPPFIRPGGPRGPEGPEEMDGRPFRGDRPGFRDREPERDRDWDRDRERDRDRGFGGGRRP
FGDGGRGGGGDRMDGRDRLGGWQEDGGDHRGGGWDRDRDRDRDRRDWRERRNSLDSDRER
GRADNGERERGRGEGGERGRVEGGSRERGRGAEGKEVGDRPRRSERRERTTRWDRDDRLA
ELENLDRFQTSNSTEQPPVTPVVTMETSKEPSVEASEKKAESELLAPSPEVKTAAEEPMT
SEPSPSAQSEPTETKEEAAAS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcaacgccttcaaccacgagttgttctcattgatggactccaagccccca
atctctcgggcaaagatgatctccatcaccaaatcggccatcaaagctatgaaactctac
aaacatgtggtccagattgtggaaaagtttatcaaaaagtgtaagcctgagtacaaggta
gcaggcctgtatgtggtggattctattgttaggcagtccagacaccagtttggatcagat
aaggatgtgtttggcccaaggttcaccaaaaacattacaggaacctttgagaacctctgc
ctttgcccagtagaggacaggagtaagattgtgcgggtgttgaacctgtggcagaagaat
ggggtgttcaagattgaggttattcagcccctcctcgacatggcagctggctctagcagt
gctgctgcaccctacacaggctcagatgatccaggttcttccccacctccagccaaagag
ccagttactgcggtaacggcaaactccaccacggcatctgctgctcagctgcaaaactct
gatgcctttgctgctgtcgcacagctctttcagtccacacagggtcaacagcttcagcag
atgctccagaactttcagcagcagccagtgaagtctgacaccaaccctcagcctcctgtc
cataccagtcaaacacaggcccaaaacataaccactggcctgggcacggtcaccccgcaa
ccgcctctgcccacccaaaccgcccagcagaaggcagcgtttgacaagaaattgctggac
cgttttgactatgatgatgaaccagaaattggagaagaaatgtcatcacaggcctccttt
atgcaacagcctccagccttcccacagcacatggagcactttaaaccgtcgatgatgaac
gtgttgcaaggcctctcgcaacaggttcctctccctcctaacggccagcttcaggcctat
ggcttaccgccaggacaaagcttcccagttatgatgcctcctatggggcatgctttgcca
gggcagaccctccctggttctactgggcctccaggcttctcaggggtatacccagcccac
aatgcagcccagcaacaacaggatttgtcaatggatatggaccgttcatctatgagggat
ggcagacatggtcgacgatcacactcaggctccaggtctccaaagcggaggaggtccagg
tctaattcccgtacacggcgatccaggcacaggcgatcgcgctcgcgctccagagaccgg
cgtcatcactccccacgctctcgctcgctggagcgcaaggagagagagaaggagagagag
cgacggcagaaaggccttccgccacccaagagcgagacactaagcatttgcagtacaact
ctctgggtgggccagttggataagagaactcaacagcaagacgttgcctgtttactggag
gagtttgggcagatagagtccatcaatatgatccctccacgcggctgtgcctatattgtc
atgatacataggcaagatgccttcagggctctacagaagcttagtagaggatctcacaaa
gtgaaccagaaagcaatcaagattgcttgggctttgaacaagggcataaagcctgacttt
aaacagtactgggatgtggagctgggtgtcacctacataccttggtctaaaatcagagag
gctcaattggaggagctcaaagaaggaggaatactggatgtggacaccttatcaccagag
tggagtggagtgagaaagactattggccacctggaggaactcaaccacaacggccgttcg
gagccacagcagcctgaggaaacacaagtattacctggggctgctgcagctgctcctcct
gctcaggttcctctgatgcagcagccaatggttggtgtgggttctctccagcctcctgtt
tttcctggtcccataggcatgcctctgccttccttccccccaggcgtcccccctcctcct
ttcatcagacctggcttcaaccccatgcagatgcctccaggttttcctcccccaggtacc
atgcctcttggtcccccacctccctccaaaggtggagttgaagacccgcctctggaccca
gcgggtctgggcaacaggaaaaatgacgaggtcctggagggtcccaacatcttcagcaat
cagatggggcctatgggtaaccagttaggtggaccgctgggttctctccaaggtggtcct
ccaggaaacctccaacccccttctggtggtctgcttggcgcacggcctggtataatccca
ctccagcgtcctccggttcccccaccaccacacatgcagcgcttccctcccccccacggg
ccacgaccccctcaccccaacatgccacctatgccaccacagatgatgcccagagggccg
caccctcaaatgatgcaacatgacccccctccacctaaaggaggctttgggatgctccct
cctcataatatgagagctcctttccctccacatgggcatggccctcctcctcaaggtcct
cctcctccttttatcagaccaggggggcctcgtggtccagaggggccggaagaaatggat
ggcagaccattcaggggagacaggcctggattcagggacagagagccagagagggacagg
gactgggatcgagatagggagagagacagggaccgaggttttggaggtggaaggcgtcca
tttggtgatggagggaggggtggaggtggtgatagaatggatgggagggaccggctcgga
ggctggcaggaagatggaggagatcacaggggaggaggatgggatagagacagagatcgg
gacagagacagacgggactggagggagaggcgaaacagcctggatagcgacagggagcga
gggagggctgataatggggagagggagcgagggaggggagagggaggagagagaggacgg
gtagaaggtgggagtcgagaaagagggagaggagctgaaggaaaagaagtgggggacagg
ccaaggcggtcagaacggcgagagaggaccacgcgttgggacagggatgatcgattggcc
gaactggaaaacctggacagatttcagacctctaacagcacagagcaacctcctgtgact
cctgtggttactatggaaaccagtaaagaaccaagtgtggaagcttctgaaaagaaggct
gagtctgaacttttagctccgtccccagaggtaaaaactgctgcagaagaaccgatgacc
tctgagccctcaccttcagctcaaagtgagcccacagaaacaaaagaggaagcagcagca
tcatag
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