Perca flavescens (yellow perch): 114566390
Help
Entry
114566390 CDS
T07494
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114566390 (brat1)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114566390 (brat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT
TOR1L1_N
MMS19_C
Cnd1
PDS5
IBN_N
Motif
Other DBs
NCBI-GeneID:
114566390
NCBI-ProteinID:
XP_028450606
LinkDB
All DBs
Position
2:33020053..33029430
Genome browser
AA seq
907 aa
AA seq
DB search
MLITHTHVSTMDRECASLLPSVCEVLADSGRSVPDDTSLEKLLDWFTGLTEAGGSLLEAC
PCLLKFISTVVYNAASDPGVLSFTLRLTGLMAATEDGFKMLQERSVLNQVFNLQHWQEAG
LWDDPCLRIGWIQGLRSTLQHPKALRFFVQSDFIDSLLQLQTDTSLFVASAANRMLAHIL
LFFQKVSSAGSNSVNKKEEDDERGIHHSATDLEPPAVTMETSAEYSAVVKGISEYLKESL
IPKENTKLHQSLQILKLLALLLAQAGPPLRDKLLQRVTDSLEQLVTAGCSQLTLPLMDVI
LAANSSCGPDGRVPDQRVTRLLSSMLSVNNAADRCHAAAALLRRGHHDTVHTARAVRILL
LPLDIITGPTLLGTNASADEHPFSVVEQLKSKTSCISMICVCLTNTPQITLTPPGVLPCP
PVLIVTAVVSLLRICSGTSSSSSTGSSEVCRNVIGSGKVQKCALEALTALNSSPGAKEKI
SEVFTILIQYLDSPDSDPTVLHKSYQALVKWIRVCTDLSLITDQLRQDLVEVVKKRACDM
RWEVRDSTVEFLGHLAGVHVSVSSGEEVCDASEALLGGCCTTPLLREALQDTESYVRASA
ISALAKTLTHSWRQGAALTQDQTEIVSRLLEILSQDTEGFPRRAVVQYFISWFFSRSSHS
PPSSSASLLMQCVRTVLSQGSADLDWEVKVHTLELAELLLDQAFSAHRGYRNGSDAHRAL
QRPYGVVSDQAYTLHTHTEGVQPDLAYVVEQGVISALLSGLVDCDRPVALKACRLLITLR
ETICPLSLGALDATAATATVPCELPGRGWGQEITKILEMEKSDRAREADVSAQRSSSAAD
GGGDGVSVSVCEVLRSLGLDQRLDVLTQSSDHIHNSPLSLLQDILTASGAHAHPDTKPGQ
EVIVDCY
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgctcataacacacacacacgttagtaccatggacagagagtgtgcttcgctgctgccc
agcgtgtgtgaggtactggcggactcagggaggtctgtgcccgatgacaccagcctggag
aaactgttggactggtttacagggctcaccgaggctggaggatctctgctggaggcttgc
ccatgtctgctcaaattcatatccactgtggtttacaacgcagcttcagaccccggtgtc
ctctccttcactcttagactcaccggcttaatggctgccactgaggacggcttcaaaatg
cttcaggaacgatctgttctgaaccaggtcttcaaccttcagcactggcaagaagcagga
ctctgggacgatccctgtttacggatcggctggatccagggcttaaggagcacgctgcaa
cacccaaaggctctcaggttctttgtacaatcagatttcattgattcgctgctacaactc
cagacagacacgagtctatttgttgcctcagctgccaatcggatgctcgcccacatcctg
ctcttctttcagaaagtctcgtctgcaggctctaacagcgtcaataagaaagaagaagat
gatgagagggggatccatcactccgccacagacttagaacccccagccgtcaccatggaa
accagcgcagagtatagtgctgttgttaaggggatctcagagtacctcaaggagtctctg
attcccaaagaaaacacaaagctccatcagagtctgcagatactcaaacttctggccctg
ctcctggcccaggccgggcctcctctccgggacaagctgctccagagagtcacagactct
ctggagcagctggtgacagcaggctgcagtcagctcacgctgcctctgatggatgtcatt
ctggctgcaaacagcagctgtggccctgatggacgtgtcccagaccaacgcgtcacccgt
cttctatcgtccatgttgagcgttaacaacgccgctgaccgctgtcatgctgcagctgct
ttgctgcgcagaggtcaccacgatacggtccacacagcccgggctgtgagaatactactg
ctccccctcgacattataactggtccgactctactgggcacaaacgccagtgcagacgag
catccgttttcagtggtagagcagctgaagagtaaaacctcctgcatctctatgatctgt
gtctgtctgacaaacacaccacagatcacactcacgcctcctggcgtcctcccctgtcct
ccagttttgattgtcactgcagttgtgtcattgttaaggatctgcagtggcacctcttcc
tcctcatccactggttccagcgaggtttgcaggaacgtaatcggcagtggcaaagtccag
aaatgtgccctagaggctctgacggctctcaacagcagcccaggagcgaaggagaagatc
agtgaagtgttcacaattctgatacaatatctggacagtcctgattctgaccccactgta
ctccacaagtcctaccaggccttagtaaagtggatcagagtgtgcactgacctctcctta
ataacagaccagctcagacaagatctggtggaggtagtgaagaagcgtgcgtgtgacatg
cgttgggaggtgagagactcgacggtggagtttctgggacacctggccggtgtgcatgtc
tccgtgtcatcaggcgaggaggtgtgtgatgcgtccgaggctctgctgggcggctgctgt
actactcctctcctgagggaggccctccaggatacagagagttatgtgagagccagcgcc
atctctgcactggcgaagaccctgacgcacagctggcgacagggggcagcactcactcag
gaccagactgaaatagtgagccggctgcttgaaatcctctcccaggacactgagggattc
cccaggagggctgtcgtacaatacttcatctcctggttcttttcacgctcctcgcactcg
cctccatcctcctccgcttctctcctgatgcagtgtgtgcgcaccgtcctctcccagggc
agcgccgatttggactgggaggtcaaagttcacacgctggagctggctgagctgctgctg
gaccaagccttttcagctcaccgcggatacagaaatgggtccgatgcacatcgtgcccta
cagcgcccctatggtgtagtttctgatcaggcctacacgcttcacacgcacacagagggc
gtgcagcccgatctggcctatgtggtcgagcagggcgtcatctcggcgttgttgagcggt
ctggttgactgcgatagacctgtggctctgaaggcctgtcgactgctgataacactccga
gagacaatctgccctctgtcgctaggggcgctggatgcaactgctgccacggcgacagta
ccttgcgaactgcctggcaggggctggggccaggagatcacaaagatactggagatggag
aagagcgatcgggccagagaggcggacgtctcggcccagaggagttccagcgcagcagac
gggggaggagacggcgtgagcgtgagtgtgtgcgaggtgttgaggtctctgggtttagac
cagcggctggacgtcctgactcaaagcagcgaccacatccacaactctcccctctctctg
ctgcaggacatactgactgcgagcggggctcacgctcatccagacacgaagccggggcaa
gaggtcatagtggactgctactga
DBGET
integrated database retrieval system
