Perca flavescens (yellow perch): 114566415
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Entry
114566415 CDS
T07494
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114566415
Cell adhesion molecules [BR:
pflv04515
]
Immunoglobulin superfamily
ROBO family
114566415
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
114566415
NCBI-ProteinID:
XP_028450647
LinkDB
All DBs
Position
13:complement(11671261..11763838)
Genome browser
AA seq
1604 aa
AA seq
DB search
MLAVQSPITFLLISLLCVNQLQPGHASDTDKHRGNREVITQTPASEPASEQDNSLGYKGS
RLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSHR
MLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQNPVDV
MVAVGEPAVLECQPPRGHPEPTISWRRDGTNLDDRDERITIRSGKLMITNTRKSDAGKYI
CVGTNMVGERESEIAELTVLERPTFVKRPSSVVVLAEESVEFHCVVQGDPVPTVRWRKDD
SDLPKGRFEILEDHTLIVRQVTSLDEGSYTCVVENMVGKSESSATLTVHVNTVPPAFAIR
PRNQVVAVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPQPFSRLSVSQMGSLTIT
DVQRSDGGFYSCQALNIAGSVITKALLEVTDSGSDQPPPVIRQGPLNQTIPVDSTVVLGC
QTADFPSPTVHWKKDGVLVSPMDSRMSIADTGSLEIRYAKLGDTGFYTCVASSPNGEASW
TAYLQVEEFGVVVQSSQPIDPNLIPSAPSKPEVTDISHTSVTLSWKTNPSAGATPTSYLI
EAFSYTLGSRWVTLAEHIKTQTFVLRNLRPATVYLFMVRAVNAYGLSDPSPISDSVRTQD
STSTMQGVDHRHIQRELGDVVIHLHPPTVLSSSAVRMQWMVEQQSTYIQGYKVLYRASAE
HGQPEGQWSVLEVHTPREDGVVIGQLKRGSIYEFKVRPFFDEFQGADSEVKVVRTLEEAP
SRAPQGVTVTKSDTNGTAILVAWKPPPQREDDGVIQEYKIWCLGNESRYHVNQSVDGSTF
SVHISNLAPGIRYSVEVAASNGAGPGVRSDATFFQLDSAGQMMDISEERDTLSQISDVVR
QPAFIAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESV
CSAVRPGLLSMGEPLNQLWLPDNWPNACANHKDCSINCCNNGNGTSDSNMTTYSRPADCI
ANYGNHTENKQGGQLGSETAIYSDVNLSNKLNEIKTFNNSNLCYASPGGDSAATYEPIPY
ATTQLIQASIKNKAASGVAMAEPLDMPCWKQPPNLPPIPKEMAAQMQYNIIEQNMLNKDH
LQGSEGMIHPKTIPYSQTRDHSTGGSHHSSDRGSNSTSGSQHQKKGTRAPKIQKHNAVSW
GEALSPPHANAWDCDEYSLPMERSFDPEERMEGCPTPPLRGAASSPPEVSYSHPPNATPQ
GDLSNGLHDGTEHLSQHISGHPRPLSPTHTYSSIPFCVDTDVQEEDEEEEEEEAEEETDA
ELADSYYSQHHKRQKHKHQLHHPSPHNLLLHGLVQTPASSTGDLDRSVTGSMVNSWGSAS
EDNISSGRSSVVSTSEGSFFTDGDFNQAVASSRDIVGLRMCRYPEESGRRHQRPSSPMST
DSNMSPAITHKRPRRHKQNQSGQQGCQPKDIFNDDSCMPLNFPSQMSHSDYKVRGATLPR
MGSGEARGRRGSAGTHRVREASFEQRESQDKHKTPLGGKGSSKSRQHAEFGDVLLYSRPS
FPSGQAQREPDDTNSSSFMSCGDSRTKQGGQLAPTGQVEEFLKS
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgtacaatcacccatcacattccttctcatcagcctgctctgtgtcaaccag
ctgcagccgggccacgcatcagatacagataaacacagagggaaccgtgaggtcatcacc
caaacacctgcatctgagccagcgtctgaacaagacaacagcctcggatacaaagggtct
cgtctccgccaggaagacttccctccccgcattgtggagcacccctctgacctcattgtg
tccaaaggggaaccagccactctcaactgtaaggcagagggccgtccaacccccacggtg
gaatggtacaaagatggggagcgcgttgagacggaccgcgacaacccccgctcccaccgc
atgctgctgcccagcgggtccctcttcttcctacgcatcgtccacggacgacggagcaag
cccgacgatggcagctacgtgtgtgtggcccgaaactatttgggccaggcgatcagtcac
aatgcatcactggaagtagctattttacgcgatgacttcagacagaacccagtggacgtt
atggtcgcagtgggggagccagctgtgctggagtgccaaccacctcgtgggcaccctgaa
cccaccatctcctggaggagagatggtaccaacttagatgacagagatgaacgcatcaca
attcgcagtggcaagctgatgatcaccaacaccaggaagagtgatgcagggaaatacatc
tgcgttgggactaacatggtgggagagagggagagcgagatcgccgaactcactgtgctt
gagcgcccaacctttgtgaagcggcccagcagcgtggtggtgttggctgaggagagtgtg
gagttccactgtgtggttcaaggagaccctgttcccactgtccgctggaggaaagatgat
tctgacctgcctaagggccgatttgaaatcctagaggaccataccttgattgttcgccaa
gtgacctctttagatgagggctcctatacatgtgtggtggagaacatggttggaaagtct
gaatcatccgccacgctcactgtacacgtcaatactgtgcccccagcatttgccatacgc
cccaggaaccaggtggtggcagtgggcaggacggtcaccttccagtgcgaggccactggc
aacccacagcccgctatcttctggcagagggagggcagtgagagtttgctgttctcgtac
cagccaccgcagccctttagccgtctgtctgtctcccagatgggcagtttgaccattacc
gacgttcagcgctctgatggcggcttttacagttgccaggctctcaacatcgctggcagt
gttattaccaaagcactgctggaggtcacagactctggatcagatcagcctccccctgtg
attaggcagggcccactcaatcagaccattcctgtggacagcacagtggtcctgggttgc
caaacagctgactttccatctcctacggtccactggaagaaagacggtgtcctggtttct
cccatggactcccgcatgtccatagcagacacaggatcactggagattcgctatgctaag
ctgggagatacaggcttctacacttgtgtagcttctagtcccaatggagaagcttcctgg
acagcatacttacaggtggaggagtttggagttgttgttcagtccagtcagccgatagac
cctaacctgattcccagtgctccgtctaaacctgaggtgactgacatcagccatacctct
gtcactctgtcgtggaaaacaaaccccagtgctggtgcaacaccaacatcttacctgatc
gaggcattcagttatacgttaggcagcagatgggtgaccctagcagagcatataaagaca
cagacctttgtactgaggaacctgaggccagcaactgtctacctctttatggtcagagcg
gtgaatgcttatggcctcagtgaccccagtccaatctctgactctgtcagaacacaggac
agcacttccaccatgcagggagtggatcacagacacatccagagggagctgggagatgtg
gttatccacctgcacccaccaactgttctttcatcttctgctgtcaggatgcagtggatg
gtcgagcagcagtccacatacatccagggttacaaggtgctttacagggcatccgctgag
cacggccagccagaggggcagtggagtgtcctggaagtacacaccccacgggaggacggg
gtggtgatcggtcagctgaagagaggttccatctacgagttcaaagtgcgccctttcttt
gatgagttccagggagctgacagtgaggtgaaggtggtcaggaccttggaagaagcccct
agcagagcacctcagggcgttacagtgacaaagagtgataccaatgggaccgctatcctc
gttgcttggaaaccgcctccgcaacgggaagatgatggagtcattcaggagtacaagatc
tggtgcctgggtaacgagagtcgctatcatgtaaaccagtcggtcgatggctccaccttc
tctgtgcacatctccaatctggcaccgggaattcgctacagcgtagaggttgctgccagc
aatggtgctggacctggggtcaggagtgatgccactttttttcaattagactctgcaggc
cagatgatggatatcagtgaggaaagagacaccttgtctcagatctcagatgtggtgagg
caaccggcatttattgctggcattggcgccacctgctggttggtcctcatgatcttcagt
gtgtggctctaccgtcaccgcaagaagagaagtggcctcagcagcacatacaccggcatc
cgcaaggtcccctcattcacctttacacctacagtggcatatcaaagaggagaatctgtg
tgcagtgctgtcagacctggccttctcagcatgggtgaacctctaaaccagctgtggctg
ccagacaattggccaaatgcatgtgccaatcacaaggactgtagcatcaactgctgcaat
aatggcaatggcaccagtgacagcaacatgacaacatacagccgaccagctgactgcata
gctaactatggaaaccatacagaaaacaaacaggggggacagcttggttctgagacggcc
atttacagcgatgtgaacctctccaacaagctcaatgagattaaaacgttcaacaactcc
aacttgtgctacgcgagtccaggaggagattcagcagccacatatgaacccatcccatac
gccaccacacagctcattcaagccagcattaaaaataaggcagccagtggtgtcgctatg
gcagagcctctagacatgccctgctggaaacagccccccaacctgcctccaataccaaag
gagatggcagcacagatgcaatataacataattgagcaaaacatgctaaataaagatcat
ctgcaaggaagtgaaggaatgatccatcctaaaactatcccctacagccagacccgtgat
cacagcacaggaggctcacaccacagctcagacagaggcagcaacagcacctcagggagc
caacatcaaaagaaaggaacacgggccccaaagattcaaaaacataatgcagtaagctgg
ggagaagccctgtctcctcctcatgccaatgcatgggactgtgatgagtatagcctaccc
atggaaaggagttttgatccagaggagagaatggaaggctgccctactccaccacttaga
ggggctgcctcatcccctcctgaagtgtcttatagtcacccacctaacgcaacaccacag
ggagacctgagcaatggcctgcatgatggaaccgagcacctcagccaacacatcagcggc
caccctcgccctctttccccaacacacacctacagctccatacccttctgcgtggacacc
gatgtacaggaggaggatgaggaggaagaggaggaggaggcagaagaggagacagacgca
gagctcgctgacagttactacagccaacaccacaaacggcagaagcacaaacaccagctg
caccacccctctccacacaatctgcttctccatgggctggtgcagaccccagcctccagc
actggggatctggacagatcagtcacagggtccatggtcaacagctggggctcagcatct
gaggacaacatctcatctggcaggtccagtgttgtcagcacctcggaaggatccttcttt
acagacggcgatttcaaccaggcagtggcctcttcgcgggatattgtaggccttcgcatg
tgtagatacccagaggagtcaggccggcggcaccagcggcccagcagccccatgtccaca
gacagcaacatgagtcctgcaataacacataaaagacccagaaggcataaacagaaccag
tccggtcaacagggctgccaacccaaagatatcttcaatgacgactcttgcatgcctctg
aattttccaagccagatgtcccacagcgactacaaagtgagaggggccacgctgcctcgg
atgggctccggggaggcccggggtcgacgaggtagtgccggcactcacagggtcagggag
gcttcatttgagcagagagagagccaggacaagcacaagactccactaggaggaaaaggg
agcagcaaaagccgacagcacgcagaatttggggatgtccttctgtacagtcgtccctct
ttcccatcaggtcaagctcagagggagcctgatgatactaattcatccagctttatgtca
tgtggagattcaaggaccaaacagggaggacagctggcacctacaggacaggtggaagag
ttcctgaaaagctaa
DBGET
integrated database retrieval system
