Perca flavescens (yellow perch): 114566420
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Entry
114566420 CDS
T07494
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04142
Lysosome
pflv04144
Endocytosis
pflv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114566420
04142 Lysosome
114566420
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114566420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114566420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114566420
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114566420
Exosome [BR:
pflv04147
]
Exosomal proteins
Proteins found in most exosomes
114566420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
114566420
NCBI-ProteinID:
XP_028450662
LinkDB
All DBs
Position
13:complement(8240087..8279901)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPSNIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
GEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
TKVKQLPLIKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLSWFLQ
EDKKECFAACLFSCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSETV
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYSQPAVQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgcctattcgctttcaggagcacctgcagctccaaaatttagggatc
aatccatccaacataggcttcagcaccctaaccatggagtcagataagttcatctgtatt
cgggagaaggtgggcgagcagactcaggtggtgatcattgacatggcagaccccaataca
cctatccgcaggcccatctcagccgacagcgccatcatgaatccagccagcaaagtcatt
gcacttaaagacgccgccaaaacccttcagatcttcaacatcgagatgaaaagcaagatg
aaggcacataccatgacggacgatgttaccttctggaagtggatctcccttaacacagtt
gcacttgtgactgacaatgccgtctaccactggagcatggagggagactcacagcctgtg
aaagtcttcgaccgtcactccagcctggcaggctgccagattatcaactaccgcactgac
gccaagcagaaatggctactgctcatcggcatctcagcccagcaaaatcgggtggttgga
gccatgcagctctactctgttgacagaaaggtttctcagcccatcgaaggccatgctgcc
agctttgcccagttcaagatggaggggaatacagaggagtcaactttgttctgcttcgct
gtcagagggcaggctggagggaagttgcatatcattgaagtggggaccccaccaactggc
aaccagccatttccaaagaaagcagtggatgtgttcttccctccagaagctcagaacgac
tttcctgtggccatgcagataagctccaagcaagatgtggttttccttattaccaaatat
ggctacattcacctgtatgacttggagacaggcacctgcatctacatgaaccgcatcagt
ggggagaccatctttgtcaccgctccacacgaggccacctcaggcatcattggggtcaac
aggaagggacaggtgctgtcagtctgtgtggaagaggaaaatatcatcccctacatcact
aatgtgctccagaatccggacctggctctccgcttagctgtccgcaacaaccttgctggt
ggtgaagagctctttgcacgcaagttcaacaacctgtttgctgctggaaactactctgag
gctgccaaggttgctgccaatgcaccaaagggtatcctgcgaaccccagacaccatccgt
cgcttccagagcgttcccactcagccaggccagacctcccccttgttgcagtactttggt
atcctgttggaccagggccagctcaacaagtttgagtcccttgagctttgcaggcctgta
ctccagcagggacgaaagcagctcctggagaagtggctaaaggaagacaagttggagtgt
tcagaggaacttggtgacctggtgaaggcagtggatcccaccttggctctcagcgtctac
ctgagggccaacgtccccaacaaagtcatccagtgctttgcagagactggtcagttcccc
aagatcgtcctgtacgccaagaaggtgggctacactccagactggatctttctgctcagg
aatgtgatgcggatcaacccagaacaaggcctgcagtttgcccagatgctggtccaggat
gaagagccgctggctgacatcacacagattgttgatgtattcatggagtacaacctgatc
cagcagtgcacctcattcctcctggacgctctgaagaacaacagaccctcagaaggacca
ctgcagactcgcctgctggagatgaacctcatgcacgctccacaggttgctgatgctatc
ctgggcaaccaaatgtttaccaactacgatcgtgcccacatagcccagctgtgcgagaag
gctggactcctgcaaagggcgctggagcactacaccgacctgtatgacatcaagcgcgct
gtggtgcacacgcacctgctcaacccagagtggctggtgaacttctttggcgcgctgtcg
gtggaggactccctggagtgcctcagggccatgctgtcggccaacatccgccagaacctg
cagatctgtgtgcaggtggcttccaagtaccatgaacagctcaccacacagtctctcact
gagctttttgagtccttcaagagctttgaaggtctgttctacttcctgggctctattgtg
aacttcagtcaggaccccgaagttcactttaaatacattcaggcggcctgcaagacgggt
cagatcaaagaagtggagaggatctgtcgagagagcaactgctacgacccagagcgtgtc
aagaacttcctcaaggaagccaaactcaccgaccagctaccactcatcatcgtctgcgac
cgctttgactttgtccacgacctcgtcctctacctgtaccgcaacaacctgcagaagtac
attgagatctatgttcagaaggtgaatcctagccgtctgcctgttgtggttggtggtctc
ctagacgtggactgctcagaggatgtcatcaagagcctgatcctggtcgtccgaggacag
ttctcaactgatgaactggtcgctgaggtggaaaagagaaacagactgaagctgctgctg
ccctggctggagtctcgtatccacgaaggctgtgaggagccagccacccataatgctctg
gccaagatctacattgacagcaacaacaaccctgaacgattcctgagggaaaacccgtac
tatgacagccgtgtggtgggaaagtactgcgagaagagagacccccacctggcctgtgtg
gcctacgagagaggacagtgcgaccaggagttgatcaatgtctgcaacgagaactccctg
ttcaagagcttgtcgcgttacctggtccgccgcaaagaccctgacctgtgggccagcgtg
ctgctggagagcaaccccttcagacgaccactcattgaccaggtggtgcaaacagctctg
tcagaaacccaggacccagaggaggtgtctgtcacagtcaaggccttcatgaccgcagac
ttgcctaacgagctcatcgagctgctggaaaagattgtgttggacaactcggtcttcagt
gaacacagaaatctgcagaacttgctgatccttacagcgatcaaagctgaccgtacccgt
gtgatggagtacatcagcaggctagacaactatgacgctcccgatatcgctaacattgcc
atcagcaacgagctcttcgaggaggcttttgccatcttcaagaagtttgacgtcaacacc
tccgctgtgcaggtgctgatcgaacatattggcaacctggaccgggcctatgagtttgca
gaacgctgcaatgagccagctgtgtggagccagctggctaaggctcagctacagaaggac
ttggtcaaagaggccatcgactcctacatcaaagctgatgatccctctgcatacatggaa
gtggtacaggctgctgataagagcggtaactgggaggacttggtcaaattccttcagatg
gctcgtaagaaggcccgtgagtcctacgtggaaacagagctcatctttgccttggccaaa
accaatcgtctggctgaactggaagagttcatcaacggacccaacaatgctcacatccaa
caggttggtgaccgctgctacgatgagaaaatgtacgatgctgcaaagctgctatacaac
aacgtctccaactttggtcgtctggcttcaactctggtgcacctcggggagtaccaggct
gctgtggacggcgcccgtaaagccaacagcacccgcacctggaaagaggtgtgcttcgcc
tgcgtggatggaaaggagttcaggcttgcccagatgtgcggtctccacatcgtggtgcac
gctgacgagctggaggagctgatcaactactaccaagaccgcggttactttgaggagctg
atcaccatgctggaggccgccctgggcctggagcgcgctcacatggggatgttcacggag
ctggccatcctttactcaaagttcaagccccagaagatgagggagcatctggagctcttc
tggtccagagttaacatcccgaaggtcctgagagcagctgagcaggctcacctgtgggcc
gagctggtcttcctgtatgacaagtacgaggagttcgacaacgccatcatcaccatgatg
aaccacccgacagatgcctggaaggaggggcagttcaaagacataatcaccaaggtggcc
aacgtggagctgtactacaaagccacccagttctatctggagttcaagcccttgttactg
aatgatttgcttatagtgctttcccccagactggaccattcccgtgctgtcaacttcttc
acaaaggtgaaacagcttcctctgatcaaaccctacctgcggtcagtacagaaccacaac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaagactatcaggca
ctgaggacatcaatagatgcctacgacaactttgacaacatctcactggcccagcgcttg
gagaagcacgagctgatcgagttcaggagaatcgctgcttacctcttcaagggcaacaac
cgctggaaacagagtgtggagctctgcaagaaggacaagctctataaggatgccatgcag
tatgcgtccgagtccaaggacatcgagctggcagaggagcttctgtcctggttcctgcag
gaggacaagaaggagtgtttcgccgcctgcctgttcagctgctatgacctgctgcggcct
gacgtggtgctggagaccgcctggaggcacaacatcatggacttttctatgccatatttc
attcaggtcatgagggagtacctcagcaaggtagataaactagaaacctccgagaccgta
aggaaagaagaggagcaggcaacagagacgcaacccatcgtctatggcacaccccagctg
atgctgacagcgggccccagcgtacctgtggcccctcagcaagcttacggctacggctac
caggcgcctgcaggatacagtcagccagcggttcagccaggctttggctatggcatgtaa
DBGET
integrated database retrieval system
