Perca flavescens (yellow perch): 114566574
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Entry
114566574 CDS
T07494
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pflv03009
]
114566574 (ddx52)
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114566574 (ddx52)
Ribosome biogenesis [BR:
pflv03009
]
Eukaryotic type
90S particles
Helicases
114566574 (ddx52)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
Motif
Other DBs
NCBI-GeneID:
114566574
NCBI-ProteinID:
XP_028450938
LinkDB
All DBs
Position
13:complement(16070023..16077136)
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AA seq
688 aa
AA seq
DB search
MDAFELFRKLGAGAKFDLKKFGQDAARFKVARSHGGEASLDALSAIDYFGRGPTNGSQSS
SIGLEEEKDDGDDGDGEEYEVGSESGDSGAGGKRKQREKDVRTKKKKKKSNKVEVEAGGG
ALEDVEGSGITWTSALDRKIQNLPSDGKEKSSLKRLKHLHQEKVNRIRSQHRINVHGCDV
PNPVCTFEELQSEYRLNPRVLQNLKDAGLSSPTPVQMQAIPLMMHGRELLACAPTGSGKT
LAFCLPLLTHLQQPANLGFRAVVISPTRELANQTYRELLRLSEGVGFRVHIMDKASLAAK
KYGPQSNKKYDILVSTPNRLVFLLKQDPPALDLSSVEWLVVDESDKLFEGGKTGFREQLA
AVFLACSGSKVRRAFFSATCTPDVEQWCRLNLDNLVSVNIGHRNTAVDSVEQDLLFVGTE
NGKLVAMRDIIKKGFLPPMLVFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVN
SFRSGKIWVLICTALLARGIDFKGVNLVLNYDFPTSSVEYIHRIGRTGRAGHQGKAITFF
TENDKPLLRSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEKKPPTRSTICTTPRFLMKK
KGKAPNKGQKREKQAAGGKQKEENGSQTAVQMQKGEKTTKGQELKRRNKTQKEGGREKHK
KASEKTGSNSSGAKLKKKKGKKNKPQEQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcgagttgtttcggaaactcggagctggagcaaaatttgacctgaagaag
tttggtcaagacgccgctcggtttaaggttgccaggtctcacggaggggaagcgtcttta
gatgctctctctgcgatcgactactttggaagaggaccaaccaatggatcccagagcagt
tcaataggactggaggaggagaaggatgatggtgatgatggtgatggagaggagtatgag
gtgggaagtgaaagtggagattctggtgcaggaggcaaaaggaagcaaagggagaaagac
gtgaggacgaaaaagaaaaagaagaaaagcaacaaggtggaggtggaagctggtggtgga
gcgctggaagacgtggagggaagcggcatcacctggacctccgcattggacagaaagatt
caaaacctgccgagtgacgggaaggagaaatcctcgctgaagaggctgaagcatcttcat
caggaaaaggtgaatcgtattcgctctcaacaccgtataaatgtgcacggctgcgatgta
cccaaccctgtgtgcacatttgaggagctccagtccgagtatcgtctcaacccacgtgtc
cttcagaacctcaaagacgcagggctgagctccccgacgccagtacagatgcaggcgata
ccgctcatgatgcatggtcgggagctcctggcctgcgctcccacaggatcaggaaagact
ttagctttctgtctcccgctgctcacccacctgcagcagccggccaacctgggcttcaga
gctgtggtcatctccccgaccagagaactggccaaccagacctacagagagctgctccgc
ctgtcggagggagtaggatttagagttcacatcatggacaaagcctctctggcagccaag
aaatatggaccgcagtcaaacaaaaaatacgatatactcgtcagtactccaaacagactc
gtcttccttctcaagcaggatcctccagctctcgacctcagcagtgtggagtggctggtt
gtcgatgagtctgataagctgtttgagggcggtaagacgggcttcagggagcagctcgcc
gcagtctttctggcctgttctggttcgaaggtgcgcagggctttcttcagcgccacctgc
acgccagatgtagagcagtggtgccgtctgaacctagacaacctggtgtctgtcaacatt
ggacacagaaatacggcagttgactctgtggaacaggatctgctgtttgttgggacggag
aacggcaaactggtggccatgagggatatcatcaaaaaaggtttcctgcctcccatgctg
gtgtttgtgcagtctatagaccgagcacgggagcttttccacgagttggtgtacgaaggc
atcaatgtagacgtgatccacgcagaccgcacgcagcagcagagggacaacgtagtgaac
agtttccggtctggtaaaatttgggtgttgatctgcacggctctgctcgccagaggaatc
gactttaaaggagtcaacctcgtgctgaactacgacttccccaccagctctgtggagtac
atccaccgaattggtcggactggtagagctggacatcaggggaaggccatcaccttcttc
acagaaaatgacaagccactgctgcgcagcatcgccaacgtgataaaacaagctggctgt
cccgtacccgactacatgattggcttcaagaagatacacagcaaagtgaagcggagactt
gaaaagaaacctcccacgagaagcaccatctgcacaacccctcgcttcttaatgaagaaa
aaaggcaaagctccaaataaaggacagaaaagagagaagcaggcagcaggcggtaagcag
aaagaagaaaatggatctcaaaccgccgtacagatgcagaaaggagaaaagacgacaaaa
ggacaggagctgaagagaagaaataaaacacagaaagaagggggaagagaaaaacacaaa
aaggcgtctgagaagacaggatcgaattcttctggggccaagttaaaaaagaaaaagggg
aagaaaaataagccacaagagcaatag
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