Perca flavescens (yellow perch): 114566761
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Entry
114566761 CDS
T07494
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04270
Vascular smooth muscle contraction
pflv04625
C-type lectin receptor signaling pathway
pflv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
114566761
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114566761
09153 Circulatory system
04270 Vascular smooth muscle contraction
114566761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114566761
Membrane trafficking [BR:
pflv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114566761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
HAND
Motif
Other DBs
NCBI-GeneID:
114566761
NCBI-ProteinID:
XP_028451272
LinkDB
All DBs
Position
13:complement(25874357..25965977)
Genome browser
AA seq
1471 aa
AA seq
DB search
MGQRCLNNYASQAQIHWIPRLHFDASPPQDTPWTPSILNKDPTDKKPKNEKSSVSLKHEF
DPTGLVQRCVIIQRDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVT
HSNHIEVVKLIKSGSYVALTVLGRPPGLPNIPLEEEEEEKKEEGAEVSSPSSLSAPHSPA
LPSGEHVTSSLPDGDENKTTHSQKADILQKMLTKEQQDLQAKEEEYSRNPRPKLLKEVQE
AKKHISLLQEQLSKATALQDGASGSRNSEAEEGDSGPPLREQTQSSPGYSANNGPSTNNN
STHSSPLTEGPGKRETPCQSPDISRRGGLNFCQSPDTEDTPDTDSSAQCIVGSPPYLLNP
QIIGAEDDYFDSQQEQINGLCSCFQSIDSLKSRPAHLAVFLHHVVSQFDPAPLLCYLYAD
MHKQTSSKESRRFFIEFHTLFMDRTANLKVPVPEAVAAEMEKRRLELIPEELCKQYTQGL
QDTLLPDLQKNLEDFRQKRSMGLTLAEDELSKLDSEGGKDQQALEKECSCAEHILSKIDD
ILLTSQPTEEEKCQTMQYVILTYMKHLGVKVKEPRGLEHKRARITFLPKIKKSMKPEKEG
EEKVKKPRFPNILGPPRRLSRVDSTSVGKAVELNKQRSPKQLSQPALGVPEQSDSSASNS
GRIRGNQLSEGSDTSTQSLPSSTTSPIHSSPTGQALDTSGPDSDSNVSPFCIPPRLGEGL
QPGDHQDAVSSPTITQFDFSPSNLKQLQEEDQETFSRMEVHCPVSSADTQSEDDQGGEME
CEENPLNWQSLVSRGVLASLTPQEIKRQEVINELFYTERAHLRMLKVLDCVFQQRLNRDS
ILPPEDIKHIFINLEEIIQLHVSVTEQMTAIRKRSETSVIGQIADDLLAWFSGEEEEKIK
RAVGTFCSNQPSALELIKSRQNKDQRFALFMQEAMSNRLCRRLQLKDIIPVEMQRVTKYP
LLLDNIAKYTGDGEEREKVKKAAKCCKKILNHVNQAVKEAENKQRLEEYQRRLDLSSLKQ
NENPMILELRNLDLTKKKMVHEGPLSWKVNKDKTIELYTILLEDILVLLQKQDERLVLKF
HGKNPASAADTKHIFSPIIKLNTVLVRPVATDNKSFFVLSMSENGAQIYELMAQTVSDQR
TWQCLITQCADTMKAKPHSRDNTPPTQSDAERDAIEIIKHGMPKASKDPNNTSSGSIHSS
DKDAACSPDIQAPPSINPFDGMKSEDEEEELVVADRQEGEEDDEEVDEAELEAFLDGRLE
DGLPFLQDGSHQGIAIKNQEQNTFSLPCSKGEDALRTLAMLKQALFNHMISREAEDEKEE
TEESKQSGARGCPLSASLPGSPEGPSESRATASSQKENPQLPSGHTELSEMTERNGGFVI
LDFGGGSEESSTDDDGGVGGDVGIDMRKLLSSSSQAGGGCGPNLSRQLMTHLRLLQADLQ
YLKDVEMKYNELRQTHSDTATDSDDNNDGIQ
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgggccagcgctgtctgaacaattatgcttcacaggctcagattcattggatcccacgc
ctgcactttgatgcatctcccccacaagacaccccatggaccccaagcattctcaacaag
gaccccactgacaagaaacccaagaatgagaaatcctccgtctccctcaaacatgagttt
gaccctacaggtcttgtccagcggtgtgtgataatccagagagatgaaaatggctttggg
ctgactgtaagtggagacaaccctgtgtttgtgcagctggtaaaagaagatggagctgca
atgcgagctggtgttcagacaggagacaggatcattaaggttaatgggaccttagttaca
cattcaaaccacatagaggttgtaaagctgataaaatcgggttcctatgtagccctgaca
gtgctggggaggcctccagggcttcctaacatccccttggaggaggaagaggaagaaaag
aaggaggaaggggcagaggtcagctcaccctcttctctctcagcgccccactcacctgca
ctgccaagtggggagcacgtcacctcctctctgcctgatggtgatgagaacaaaaccaca
cacagccagaaggccgacatcttgcagaagatgctaaccaaggagcaacaggacctacag
gcaaaagaggaggagtacagcagaaaccctcggcctaaactactgaaggaggtccaggaa
gccaagaagcacatttcactgctgcaggagcagctcagcaaagcaacagcattacaggat
ggagcctcagggtccaggaatagtgaggctgaggagggggacagtgggcctcccctgagg
gaacagacccagtcctcaccgggttacagcgctaacaacgggccctccaccaacaataac
tccacgcacagcagccccctcacagagggtcctggcaaaagagagacgccctgtcagagc
ccggacatcagccgccgaggtggcctcaacttctgccaatcgcctgacactgaggacacc
cctgacacagactccagtgctcagtgcattgtgggtagccctccctacctcctcaacccc
cagatcatcggagcagaagatgactactttgactctcagcaagagcagattaatggactg
tgtagctgtttccagagtatagactcgctgaagtctcggccggctcacctcgcagtcttc
ctccatcatgttgtctcgcagtttgaccctgcacctctgctctgttatctctacgctgac
atgcacaaacaaaccagctccaaagaaagccgacgcttcttcatagagttccacacactc
tttatggatcgaacagcaaatcttaaagtaccagtgccagaggcagttgcagctgaaatg
gagaagcgaaggttggagttgattcctgaggagctctgcaaacagtacacccaggggtta
caggacacactcctaccagacctgcagaagaacctggaggacttcagacagaagcgcagc
atgggtctgactctggctgaagacgagctgtccaagctggactcagaaggaggaaaagac
caacaggcgttggaaaaggaatgctcctgtgcggaacacatcctctccaaaatagatgat
atcctgttgacgtcacagcccacagaagaagagaagtgccaaacaatgcagtatgtgatt
ctcacctatatgaagcaccttggggtgaaagtgaaggagcctcgaggcctcgaacataaa
cgagcacgcatcactttcctgcccaagattaagaagagtatgaagcctgagaaggagggt
gaggagaaggtgaaaaagcctcggtttcccaacatcctcggcccgcctcggcgtctgagc
agagtggactctacttcagttggtaaggccgtggagctgaacaagcagcggtcaccaaag
cagctctctcagcccgccctcggcgtccctgagcagtctgactcttctgcctcgaattct
ggacggatccgtggaaatcagctcagtgagggatcagataccagcacacaatctttgccc
tccagcaccacctcccctatacacagctcgcccaccggtcaggccttagatactagtgga
ccagactcagactccaatgtgtcaccattttgcatcccgccaagactgggcgagggtctg
cagcctggcgaccaccaggatgccgtctccagtccaaccattactcagtttgacttcagc
ccctccaacctgaagcagttacaggaggaagaccaggaaactttcagtaggatggaggtg
cattgtcctgtgagttcagccgacacccagagtgaagacgaccagggaggtgagatggag
tgtgaagaaaaccctctgaactggcagagtctggtcagtcgaggcgtcctggcgagctta
acgccacaggagatcaaacggcaggaagtcatcaacgagctgttctatactgagcgtgca
cacttgcggatgctgaaggtgttggactgtgttttccagcagaggttgaacagggacagt
atcctccccccagaggacatcaaacacatctttattaacctggaggaaatcattcagctg
catgtttctgtaacagagcagatgacagcgatcaggaagaggagtgagacgtcggtgatc
ggtcagattgcagatgatctcctggcgtggttcagtggggaggaagaggagaaaataaaa
cgagcagtgggaacgttctgtagcaaccagccgtctgcactggagctcatcaagagcagg
cagaacaaagaccagcggttcgctttattcatgcaggaagccatgagcaaccgtctgtgt
cgcaggctgcagcttaaagacatcattcctgtagaaatgcagagagtcaccaagtaccca
ctcctattggacaatattgccaagtacacaggagatggggaagagagggaaaaggtgaag
aaagctgccaaatgttgcaaaaagatcctcaaccacgtcaaccaggctgtcaaagaggct
gagaacaaacagaggctggaggagtatcagagaaggttagacctctcgtcactcaaacag
aatgaaaaccccatgatcctggagctgaggaatctggatctgaccaagaagaagatggtg
catgaaggacctctctcctggaaagttaataaagacaagacaattgagctgtacacaatc
ctcctggaggacatcctggttttactgcagaaacaggacgagcgtctggtcctcaaattc
cacggcaagaatccggccagcgccgctgacaccaaacacatcttcagccccatcatcaag
ctcaacactgtcttggttcgtccagtggcaactgacaacaagtctttcttcgtcctatcc
atgtctgaaaacggggctcagatctacgagctgatggctcagacggtgtctgatcagaga
acgtggcagtgtctcatcacacaatgtgccgacaccatgaaggccaaaccccacagcaga
gacaacacacctccaactcagtctgatgctgagcgggatgctattgagatcatcaaacat
gggatgcccaaggcgagcaaagatcctaacaacacatcaagtggaagcatccactcctca
gataaagatgccgcctgttctccagacattcaagctccaccgagtatcaacccgtttgat
ggcatgaaatcagaagatgaggaagaggagctggtcgtggcagacagacaggagggagag
gaagatgatgaagaggtggatgaagcagaactcgaggctttcctggacgggcggctggaa
gatggactgcctttcctgcaggatgggtcacatcaaggcatcgccattaagaaccaagag
cagaacacattcagcctaccgtgctccaaaggcgaagatgctctcaggacgttggcgatg
ctgaagcaggctcttttcaaccacatgataagcagagaggcagaggatgagaaagaggag
acagaggagagcaagcagagtggggcccgtgggtgtccgctgagtgcctctttgcctggg
agcccagaggggccctctgagagccgagcaactgcaagttcgcagaaagaaaaccctcag
ctcccttcgggacacacagagctgtctgagatgaccgaacgcaacgggggttttgtgatt
ctggatttcggtgggggctccgaggagagcagcactgatgatgatgggggagtgggaggt
gacgtggggatcgacatgaggaaactgctgtcctcctcctcgcaggcagggggcggctgc
ggacccaacctcagcaggcagcttatgacccacctgcgcctccttcaggccgacctgcag
tatctgaaggatgtggagatgaagtacaacgagctgcgacaaacgcacagcgacacagct
actgactccgatgacaacaatgatgggattcagtga
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integrated database retrieval system
