Perca flavescens (yellow perch): 114566791
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Entry
114566791 CDS
T07494
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pflv04990
]
114566791 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
pflv04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
114566791 (thsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
FRG2
Motif
Other DBs
NCBI-GeneID:
114566791
NCBI-ProteinID:
XP_028451344
LinkDB
All DBs
Position
13:16938957..16946657
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AA seq
945 aa
AA seq
DB search
MPQAVSLLPFLLALMGYAFAGLNIWPSFHVALSNASVFVEFSTRSNSSTIRNTSLSLVNT
ETNTTLLTRTLPNNQSAGKVEFNCSCFLYAGTFRFLLRQTSISAFSRANGTHDSSTESTS
WWWSSELQVQWPTFHIAVDRARNHSGSFQVGISTNEHFQACSSGIDSALFLEVSYMEYNQ
IGRNSIDKVQARTRHPIKPLRSQSVELSCAFPFTERDFIRVALRSPHSAQDVKSSGPLYL
SRIFSYKLLVENTHAYRSACEGTMTVKLITPPCAHINGKVMLYKDAGVGRGVAVSSGMEA
GETAVMEFGPDEPSSPLLAFNWLTQGENETEFNCSVFYPGRNKYCFRFVFNFSRSPSPAQ
TCLVVHRSIESWGPWLPWSVCSVSCGEGVRERVRECLLPSGVGGMQCTGMVKEQSLCSLE
DCAVLPAPSPSLPPVAVRVVPLGGNMVVVAGISLCLAVILATVVVTLWRKLCKTPQCSSV
RRGSMHSPGGRKLSDEASICGHSLQRPSLSDGHVPPGGVGVAQKDRPFLGSQSLSQTLVI
PLSQDPERLSPTGQKMLPPIFGYRLAQQQLKEMKKKGLKEATQLYHVSSSPVHDTVVDTS
ASPTNSPIPAPTGFAHLTLPLGLQDDANHNNFCIAESRVTPDRLSPRVELVLGPSVSAHA
SGGSSKWRDRTADWVEMVERSGLAGFRGGGDAGMENSYHKNPNFRRTSSFNDTKPQPLSS
VHSRQFRERSMTQVGSRTLPEGSCWNKAGRERQPYSSYPIPEYGTPEWAKSRPQRNDQRK
PWIEKAAPSHNNELKHTGTNTNSISASEKHAKANLSGIGERQISDETGGVEGISGIGGPA
TGPSSLSVDRAQRAEQNWNRRGPSPIQRNILARKLKEAQSCSGVKGRQRSSTFSVSPLEQ
RKSLCHSLPMSGGCSSSGGSPYRLSEAEQRMLDLDLSSAYVGEED
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctgtctcactgctgcccttcctgcttgcgctcatgggatatgcttttgca
gggctcaatatctggccctccttccacgttgctcttagcaatgctagtgtatttgtggaa
ttcagcactagatccaacagcagcaccatccgcaacacaagcctctctctggtcaacaca
gaaaccaacaccacccttctcacaaggactctccccaacaaccaatcggccggtaaggtg
gagttcaactgttcttgcttcctgtatgcaggaactttccggttcctgctgaggcagact
agcatctctgctttttctcgtgctaatggcacccacgacagtagcacagagagcacttcc
tggtggtggagttcagaactgcaggtgcagtggcccacctttcacatcgctgtggacagg
gctagaaaccactcaggatcttttcaggttgggatatccactaatgaacactttcaggct
tgctccagcggcattgactcggctctcttcctagaagtcagctacatggagtacaaccag
atagggcgaaacagcatcgacaaggtccaagcccgcacccgacacccaatcaaacccctc
cgttcccagagtgttgagctgtcctgtgctttccccttcacagaaagagacttcatacga
gtggctttacggtctcctcattcagcacaggatgtgaagagctctggacctctctacctg
tcccgtatcttctcctataagctgctggtggaaaacacccatgcttacaggagtgcttgt
gaagggactatgactgttaaactgataaccccaccttgtgctcacatcaatggcaaagta
atgctgtataaggatgcgggtgttggaagaggggttgctgtttcctctgggatggaagca
ggtgaaacagcagtgatggagtttggaccagatgagccctcttcacctctgttggccttt
aactggctgactcagggagagaatgagacagaattcaactgttctgtgttttacccagga
aggaataagtactgctttcgctttgttttcaacttcagtcgctcccctagtccagcacag
acctgtttggtggttcacaggagtatagagtcatggggcccgtggctgccatggagtgtg
tgcagtgtgagctgtggagagggggtgagggaacgagtgcgtgagtgtttgctgccctca
ggtgtgggagggatgcagtgcaccggcatggtgaaggaacagtctctctgctcactggag
gactgtgccgtgttgcctgctccttctccatccctcccccctgtggctgtcagagttgtg
cccctaggtggtaacatggttgtggtggctggtatctccctttgcctagctgtgattctg
gctactgttgtggtgactttgtggagaaagctttgcaagacccctcagtgcagctctgtc
cgcagaggctccatgcattcccctggaggacgcaagctttccgatgaggcatccatttgt
ggccacagcctccaaagaccgagcctgtctgacggccacgtccccccaggaggcgtgggt
gtagcccagaaagacaggcctttcctgggcagtcagtctctctcacagaccctggtgata
cctctctcacaggacccagaaagactgtcccccacaggtcagaagatgttgccaccaata
tttgggtaccgattggctcagcagcagttgaaagaaatgaagaagaaggggttaaaggag
gcaacacagctgtaccatgtctcttcaagcccagttcatgacactgtggtggatacatca
gcttcccccacaaactcccccatccctgcaccaactggatttgctcatctcacactccct
ttgggcctccaggacgacgctaaccacaataatttttgtattgcagaaagtagggtcacg
ccggacagactgagtcccagagtggagctggtcttaggtccttctgtctctgctcatgct
agtgggggcagctcaaaatggcgtgaccgcactgctgactgggtggagatggtagagagg
agtgggttagcaggtttcagaggaggaggagatgcagggatggaaaactcctatcataag
aatccaaatttccgcaggacctccagttttaatgacaccaaaccccagcctctatcctct
gtacactccagacagttcagagaaaggagcatgacccaggtgggatctcggacccttcct
gaaggaagttgttggaataaagcaggacgggagaggcagccatacagctcttaccccatt
ccagagtacgggaccccagagtgggcaaaatccagaccacagagaaatgaccagaggaag
ccctggatagagaaagctgctccttctcacaacaatgaactcaaacacacaggaaccaac
acaaacagcatatcagcatctgagaaacatgctaaagcaaacctcagtggcatcggggaa
aggcaaattagtgatgagacaggaggtgttgagggaatctcagggattgggggtcccgcc
acggggccttccagcttgagtgtggatcgcgcacagcgagctgagcagaactggaaccgt
cgcgggccatcgcctattcagaggaacatcctggcccggaaattaaaggaggctcagtcg
tgctctggggtcaaagggcggcagcgcagctccacctttagtgtatcgcccttggagcag
aggaaaagtctatgccactctctgccaatgtctggaggctgcagcagcagtgggggctca
ccctacaggctgagtgaggcagagcagaggatgttggacctagatctgtcctcagcatat
gtaggggaagaggactag
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