Perca flavescens (yellow perch): 114566862
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Entry
114566862 CDS
T07494
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114566862 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114566862 (nup98)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114566862 (nup98)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114566862 (nup98)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114566862 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
114566862
NCBI-ProteinID:
XP_028451468
LinkDB
All DBs
Position
13:complement(32813258..32951277)
Genome browser
AA seq
1858 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTASTFGQQNAGFGATGGFGTTAFGATANTGGLFGTTQNKPGG
LFGSSTFSQPATSAPTTGFGFNAGTGTSTGLFGNTGTGTSGGLFSQQNNAFGANKPTSFG
KVSLPSCPPGFGTSTSSGGLFGSTNTTSNPFGGGGVASLFGSSGFTAAQQQPGTTVKFNP
PTGSDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAAPTGGL
FGATAPTSSAATGLFGAAAPNTSFSFGQNKSTFGAAAPAGGFGASAGGLFGQPQAAQQTA
SLFKPFGQATTTQSTGFSFGNTNTMGQATSNSIGLFGNTATPQTGGLFGAAQPSTATGGF
GTGTGLFGATNPGFGAVGTQSLFGNKTAGFGTTTTSTPSFGTGTGLFGNKPSLTLGPGTN
PSTFGFGANPAAGSLFGNKPATGGLGAALGTSFGAAVGTGQSSLFGNNQGKLGTTLGTMG
AFGTAGGFNSGASVGFGPPQQPIALTDPNGAAAQQAMLQQQLSNLAYSPYGDSPLFRNPL
SDPKKKEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALTSSGASKSQLFDGLDDDE
PSLTNGAFIPRKSIKKLVLKNLNSSQYSSPINKETDDLASPPEYPQNGHSHMEEEEEMPG
PSSRTDDDPEVTQFYVNPIAKPIPQGRIQTSLQDTISDLNMHKPVRNGLELSSEDVSASL
GDESLRDESLQEDREEEQQESQQSPHPAGIVLNRVGYYTIPSMEDLAEMVDENGNCVVDN
FTIGRKGYGSIFFPGEVNVTGLNLDEIVHFRRKEVIVYPDDKTKPPQGEGLNRRAEVTLD
GVWPNDKTACTQIRSPERLTEMNYEGRLEKASRKQGARFLEYRTETGSWVFEVAHFSKYG
LQDSDEEDDVPPKADPKKLKTMLPLPPSRLQQPLPSSQQQVAPQAQSTVVVDLPGGVAEL
DSDMADITQSFPTESMLGGEEDSDQLLAGEMEVASGKLGGLTYAELNGVSASSHMASSLG
INPHTLQIMKASLFADDEEESDMFQSQGAMKVSTDVSSPRLVLPGSQGRPSVGGLLQTRF
TSGLFSQMSDSPRPPLLPPSLSRGSPAAAEQSRLLHWAGPGPSSFMLPSRTPEPTVRTVG
VRRLGGPVPIKESVTQGKGSLLMDAALFAGRSFRVGWGPGWTLAHCGHRLSSPPTKQLDR
QELTKTDYSFLPKPARKPLMESSYKVVLEQLVGLGPPAVKSRLEEEEEEEEESQAVLQRP
LEICLKHSIVDITDASACPLVRPQPGVAALHEYAEWIVELGDKQRDTDPVLGYWAEVWTL
CEALWGRLGPADQEPDVETASEYEQQLERRRTFSAWLSRGASCRVEEEVALAGKGRHTDA
IFSYLTGNRISEACRLAQKEGDHRLSLLLSQAMGSQFCRDLLALQVADWNRMQTDSYLPE
ERLRIFTLLAGKPVWQSSDSVVNVCSELDWKRCVAVHLWFMLPPTASVADALARYEAAFQ
GSCEAGKYACAPLPPYLEAMQPDMEDEEEESKRPLHDLCFHLLKLYSDRHYSLQQLLDPL
TVTWERLDYRLSWHLWGVLQALHYSHLSASRQGLLHASYAAQLESAGLWDMAVFILLHIP
DHTQRERAVREMLTLHCPLQETDESVRRERFLTEKLLIPEQWIHEAKATRARRESDRHQE
ALHLYRARYWSQCHRLLIQHLASDCIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGRVY
LDYIRVVKTLQDIQQMENAGYELERLYTDVTSLCSRIELLPCRTARDRLAQSEMAKRVAN
ILRVVLSLQQGDGASDSLSIPLTQMAPHITRLPMPEDYALEELRGLTQSYLRQLIVSQ
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttggaactcccttcggtggagggacaggggggtttggcacagca
tcgacctttggacaacaaaacgcaggttttggggcgacgggaggctttgggacgactgca
tttggagccaccgccaacactggaggactgtttggtaccacacagaataagcctggcggt
ctgtttgggtccagtacgttcagccagccggcaacttccgcccccaccaccggctttggt
tttaatgcagggactggcacgtccactggcctgtttggcaacaccggaacgggcaccagc
ggcggactcttctcccagcagaacaatgctttcggtgccaataagcccacctcgtttgga
aaagtctccctcccatcgtgtcctccaggctttgggacgagcaccagcagtggaggactg
tttgggtcgaccaacaccacctccaaccctttcggtggaggtggtgtcgcttccctgttc
ggaagctcagggttcaccgccgctcagcagcagccaggaacaaccgtgaaattcaatcct
ccaacaggaagtgacacaatggtaaaagcaggcgtgaccacgagcatcaacaccaagcac
cagtgcatcacagccatgaaggaatacgagaacaaatccctggaggagttgaggctggag
gactaccaggcgggcaggaagggtccgaccaacccgatggctgcgccgacgggcggtctg
ttcggtgctacggcgccgacgtccagcgccgccaccggcctgttcggtgccgccgccccc
aacaccagcttctcctttgggcagaacaagagcacctttggtgcagcagcacctgccggc
ggttttggtgcatccgcaggcggtctgttcggtcagccgcaggctgcacaacaaacagcc
agcctcttcaagccgttcggtcaggccaccaccacacagagcactggcttctccttcggc
aacaccaacacgatgggacaggccacctccaacagcataggtctgtttgggaacacggca
acgccgcagacgggtgggttgtttggcgcagctcagccgagcaccgccactggcggcttt
gggacgggcaccgggttgttcggcgcaaccaaccctggattcggagctgttggcacacag
agtttattcggcaataagactgctgggtttggcaccaccaccacaagcaccccctccttt
ggcacaggcaccgggctgtttggcaacaagccctccctcacgctggggccgggaaccaac
ccctccaccttcggttttggtgcaaaccctgctgccgggagtctttttgggaacaagccg
gccaccggaggcctgggggctgcactgggaaccagcttcggagcagcagtgggcacagga
cagtcgtctctgtttgggaataaccaaggtaaactgggtaccacactgggaacgatggga
gcattcggaacggccggaggattcaacagcggagccagcgtgggcttcggaccgccacag
cagccaatcgcgctcacggatccgaacggggcggccgcccagcaagccatgcttcagcag
cagctcagcaatctggcgtactcgccgtacggagactcgccgctgttcagaaacccgctg
tcagaccccaagaagaaagaggagcgtctgaaaccaaccaatccaacggcccagaaggct
ctgaccacgcccacccactacaagctgacccctcgacctgcgaccagagtccgccccaaa
gcgctgacgtcatcaggggcctccaagtcgcagctctttgacggcctggacgatgatgag
ccctcactcaccaacggagccttcattcccaggaagagtatcaagaaacttgtgctgaag
aacctgaacagcagccagtacagcagtccaatcaacaaagagacagacgacctcgcttca
cctccagagtatccacagaatggacacagtcatatggaggaggaggaggagatgcccggt
cccagcagccggacggacgacgacccggaggtcacccagttctacgtcaaccccatcgcc
aagccgatcccgcagggccgcatccagaccagcctgcaggacacaatcagcgacctcaac
atgcacaaaccggtcaggaacggactagagctgagcagcgaggatgtgtctgcgtctctg
ggagatgagtctctgcgagacgagtctctgcaggaggacagagaggaggagcagcaggag
tcccaacagtctcctcacccagcagggatcgttctgaaccgtgttggttattacaccatc
ccctccatggaggatctggctgagatggtggatgaaaacggaaattgtgtagtggacaac
ttcaccattggcagaaaaggctacggctcaatcttcttccccggtgaggtgaatgtgacg
ggactgaacctcgatgagatcgtccacttcaggcgcaaagaagtcatcgtgtacccggac
gacaaaacgaagcctccacagggggaggggctaaacaggcgagccgaggtgactctggac
ggcgtttggccaaacgacaagacggcctgcactcagatcaggagccccgagcgtctgacg
gagatgaactacgagggtcggctggagaaagcctcgcgtaaacagggagcccgtttcctg
gagtacagaacggagaccggatcatgggtgtttgaggtcgcccatttctccaaatatggc
ctccaggactctgacgaggaggacgatgtcccgcccaaagccgaccccaagaagctgaag
acgatgctgccgcttcctccctccaggctgcagcaaccactgccctcctcccagcagcag
gtggcgccacaggctcagtccactgttgtcgtggatcttccgggtggcgtggcagagctg
gacagcgacatggccgacatcactcagagcttcccgacagagagcatgctgggaggagag
gaagacagcgaccagctgttagcgggggagatggaggtggcgagcgggaagctcggaggt
ttgacctatgcggagctcaacggcgtctctgcgtccagccacatggcgtcctcgctgggg
atcaacccgcacacgctccagatcatgaaggcgtctctgtttgcggatgatgaagaggag
agcgacatgttccagagtcagggagcgatgaaagtctccacggacgtctcgtctcctcgc
ctcgtcctgccgggatctcagggccgaccctccgtgggaggtctccttcagactcgtttt
acctccggcctcttctctcagatgtcagactctccccgtcctcctcttcttcctccttct
ctctcccgggggtctccagcagctgccgaacagtcccggttgttacactgggccgggccg
ggcccttcgtccttcatgctgccctccagaacgccagagcctaccgtcaggacggttggc
gtccggcggctgggtggccccgtccccatcaaagagtcggtcactcaggggaaggggagt
ttgttgatggacgccgcgctgttcgcgggtcgttcctttcgggttgggtggggtcccggc
tggacgctggcacactgcggccaccggctgagctcaccgccaaccaaacagcttgaccgc
caagaactgaccaaaactgactacagcttcctgccaaaacctgccaggaaaccgctgatg
gaaagctcctataaggttgtgttggagcagctggtgggtctggggcctccggctgtgaag
agccgactggaggaagaggaggaggaagaagaggagagccaggcggtgctgcagcgcccc
ctggagatctgtctgaagcacagcatcgtcgacatcaccgacgcctccgcctgccccctg
gtgcggccgcagcccggcgtggcggcgctgcacgagtacgccgagtggatcgtcgagctg
ggcgacaagcagcgagacaccgaccccgtcctgggttactgggccgaggtctggaccttg
tgcgaggccttgtggggccggctgggccccgcagatcaggagccagacgtcgagacggcc
agcgagtacgagcagcagctggagaggaggcggaccttctcggcctggctgtcccgcgga
gccagctgcagggtggaggaggaggtggcgttggccgggaagggtcggcacacggacgcc
atcttcagctacctgacgggaaaccgcatcagtgaggcgtgtcgactggctcagaaagaa
ggagaccaccgtctgtccctgctgctgtctcaggccatgggctctcagttctgccgggac
ctgctggcccttcaggttgccgactggaaccgcatgcagaccgacagctacctgcccgag
gaacggctgcgcatcttcacgctgctcgccgggaaacctgtgtggcagtcgtctgactcg
gtcgtgaacgtgtgctctgagttggactggaagcgctgcgtcgctgtccacctctggttc
atgttgcctccaaccgcctccgtggccgacgcccttgccagatacgaagccgccttccag
ggctcgtgtgaggcggggaagtacgcctgcgcccccctccctccgtacctggaggcgatg
cagccggacatggaggatgaggaggaggagtctaaacggccgctgcacgacctctgcttc
cacctgctcaaactctacagtgacagacactacagcctccagcagctgttggaccccctg
acggtgacctgggagcgcctggattaccgcctgagctggcacctgtggggcgtcctgcag
gcgctgcactacagccacctgagtgcctcgcggcagggactcctccacgccagctacgcc
gctcagctggagagcgccggcctctgggacatggcagtcttcatcctgctgcacatcccc
gaccacactcagcgggagcgagcggtgagggagatgctgaccctccactgccccctgcag
gagacggacgagtcggtccgaagggagcgcttcctgacggagaagctgctgatcccagag
cagtggatccacgaggccaaagccacccgagctcgccgcgaaagcgacagacaccaagag
gctctgcacctgtaccgggccagatactggagccagtgtcatcggctgctcatccaacac
ctggcctcagactgcatcatcaacgacaaccacgactacctgttggagttcctggagggg
ctggcggtgcctgaacacagcgccaccatccaggactgggacactgccgggagggtttac
ctggactacatccgggtagtaaagactctgcaggacatacagcagatggaaaacgctggt
tacgagttggagcgtctctacaccgacgtgacgtctctgtgcagcagaatcgagctcctg
ccctgccgcaccgccagagaccgcctcgcccaatcagaaatggcgaagcgtgtggcgaac
atcctgcgggttgtgctgagtctgcagcagggcgacggagcctccgactccctcagcatc
ccgctcacccagatggcgccgcacatcacccgcctgccgatgccggaggactacgcgctg
gaggagctgcgaggcctcacgcagtcatacctgcgacagctcatcgtcagccaatga
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