Perca flavescens (yellow perch): 114566984
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Entry
114566984 CDS
T07494
Name
(RefSeq) LOW QUALITY PROTEIN: spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114566984
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pflv04812
]
114566984
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
114566984
Membrane trafficking [BR:
pflv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
114566984
Cytoskeleton proteins [BR:
pflv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
114566984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_14
Mg_chelatase
MIT
IstB_IS21
AAA_24
NPHP3_N
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
114566984
NCBI-ProteinID:
XP_028451662
LinkDB
All DBs
Position
2:complement(1795559..1820483)
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AA seq
859 aa
AA seq
DB search
MSPWGSSRRTGDGAGKLDVLWSVSYPLLAGLSLLILPLLFCWRRSRNAAAVRAERRATEN
RERDGGTGSPERGDRVRSHHGRAFEFISAALRIDEDEQGDKQQAVGWYQRGITELEKGLA
IHISGHGEKSECDRRLQSKMTTNLIMAKDRLKSLVEGLSVSGAQADLYSATSSPAHRQAP
LRSGPSGRPGAVSRKRDSVNPAPTGRPKPSSSSSSSSSSLGLPRSTPLGPQRPPAAHGNS
KGRTSRRGVVVRSTPPLPPPLEKKDVKKNLKNVDGKLADLILNEIVDSGSSIRFADVAGQ
DLAKQALQEIVILPALRPELFTGLRTPARGLLLFGPPGNGKTMLAKAVAAESNATFFNIS
AASLTSKYVGEGEKLVRALFSVARELHPSIIFIDEVDSLLCERREGEHDASRRLKTEFLI
EFDGVQSGGEERVLVMGATNRPQELDQAALRRFSKRVSRGTGEETRLSLLKNLLEKHSSP
LTQRELQQLARMTEGYSGSDLTSLAKDASLGPIRELHPEQLRKMEASEVRNICFRDFVES
LMKIKRSVGAQTLELYTRWNRDYGDTTAGTETTETPQLDQRLRRHHSWNRDYRDITAGSE
TTETPQLEQRLQRHHSWNKDYRDTTAGTETTETPQLEQRLQRHHSWNKDYGDTTAGTKTT
ETPQLEQRLRRHHSWNKDYGDTTAGTKTTETPQLEQRLRRHHSWNKDYGDTTAGTETTET
PQLEQRLQRHHSWNKDYRDTTAGSETTETPQLDQRLRRHHSWNRDYGDTTAGTETMETPQ
LEQRLQRHHSWIRDYRDTTAGTKTTETPQLEQRLQRHHSWNRDYGDTTAGSETTETPQLE
QRLQRHHSWIRDYRDTTAG
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgagtccctggggaagcagcaggcggaccggtgacggtgccgggaagctggacgtgctg
tggtccgtgtcctacccgctgctggccgggctgtccctgctcatcctcccgctgctgttc
tgctggcggcggagccgcaacgcggccgctgtcagagccgagcgccgagccacggagaac
cgggagcgggacggcggcaccgggagcccggagcgaggcgaccgggtccggagccaccac
gggcgggccttcgagttcatctctgcggcgctgaggatcgatgaggatgagcaaggtgac
aagcagcaggcggtgggctggtaccagcgagggatcaccgagctggagaaaggcctggcc
atccacatctcaggacacggagagaagtcggagtgcgaccggcggctgcagagcaagatg
acaaccaacctgatcatggccaaagaccgactcaagtctctggtggagggtctctccgtc
tccggggctcaggcggacctttacagcgccacctctagccccgcccaccgccaggctccg
ctgcgttcagggccgtccggccggcccggcgccgtctccagaaagagagactctgttaac
cccgcaccgaccggccgcccgaagccttcctcctcctcctcctcctcctcttcctcgctg
ggtcttcctcgctccacgccgctcggccctcagcgcccccccgctgcccacggcaacagc
aaggggagaacaagtcgccgcggggttgtagtccgctccacccccccgctgcccccaccg
ctggagaagaaagacgtgaagaagaacctgaagaacgtagacgggaagctggccgacctc
atcctgaacgagatcgtggacagtgggtcctccatcaggtttgcagatgttgccgggcag
gatttggcgaagcaggcgctgcaggagatagtcatcctgccggcgctgaggcccgagctg
ttcacagggctgcggactccagccagaggacttcttctcttcggtcctcctggcaacgga
aagaccatgctggctaaagctgtggcagccgagtccaacgccaccttcttcaacatcagc
gcagccagcttaacttccaaatacgtgggtgaaggagagaagctggtccgagctctgttc
tccgtggccagagagctgcatccctccatcatcttcatcgatgaagtggacagtctgctg
tgtgaacgaagggagggtgagcatgacgccagccggcgcctgaagacagaattcctcatc
gagtttgacggggtccagtcgggtggtgaggagagggttctggtgatgggagccaccaac
cggccgcaggaactggaccaagctgctctcaggaggttctctaagagggtgagcaggggg
acaggagaggagactcgcctcagtctgctgaagaaccttctagagaaacacagcagcccg
ctgacgcagcgagagctccaacagctcgccagaatgacagagggctactccggcagcgac
ctcacctcattggctaaagacgcctccctgggaccaatcagagagctgcatccagaacaa
ctgaggaaaatggaggccagtgaggtgaggaacatctgtttccgagacttcgtggagtct
ctgatgaagatcaagaggagcgtcggtgctcagaccctggagctgtacactcgctggaac
agagactacggagacaccacagctggaacagagactacagagacaccacagctggatcag
agactacggagacaccacagctggaacagagactacagagacatcacagctggatcagag
actacagagacaccacagctggaacagagactacagagacaccacagctggaacaaagac
tacagagacaccacagctggaacagagactacagagacaccacagctggaacagagacta
cagagacaccacagctggaacaaagactacggagacaccacagctggaacaaagactaca
gagacaccacagctggaacagagactacggagacaccacagctggaacaaagactacgga
gacaccacagctggaacaaagactacagagacaccacagctggaacaaagactacggaga
caccacagctggaacaaagactacggagacaccacagctggaacagagactacggagaca
ccacagctggaacaaagactacagagacaccacagctggaacaaagactacagagacacc
acagctggatcagagactacggagacaccacagctggatcagagactacggagacaccac
agctggaacagagactacggagacaccacagctggaacagagactatggagacaccacag
ctggaacaaagactacagagacaccacagctggatcagagactacagagacaccacagct
ggaacaaagactacagagacaccacagctggaacagagactacagagacaccacagctgg
aacagagactacggagacaccacagctggatcagagactacagagacaccacagctggaa
cagagactacagagacaccacagctggatcagagactacagagacaccacagctggatga
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