Perca flavescens (yellow perch): 114567016
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Entry
114567016 CDS
T07494
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114567016 (zc3h12b)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114567016 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
114567016
NCBI-ProteinID:
XP_028451705
LinkDB
All DBs
Position
13:complement(12660572..12670296)
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AA seq
844 aa
AA seq
DB search
MTVWSMVEKLKMEKRPCREENIDSSKAQHASDDSEDGSSSESESEEQQHQRVQVNNSRCK
KREPLAVAKPHRQLCRSPCLDRPSFSQSSTAQDCREDDPSAGPGIKPASGREYQTKMEFA
LKLGYSGEQVETVLNKLGSAALINDLLAELVRLGNKVEPEIQPCISTATSISRPPCVKET
VSPEVSVEDDSVDTFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITV
FVPAWRKEQSRPDALITDQEVLRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSYDSD
GIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRRRPV
VPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALAKY
GTGPATAKGDSNSEVKHVAPKRQSDPSIRSVACEPPEALSVARKSETNSVPSLVSALSVP
TMQPVKSHAAGALNTRSASSPVPGSLQFAHSSMSSVQYPPILVTNSHGASITYGEQFPKY
DSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNSDSFS
SYGDLYPSSMDSSLEESMKGQQQQSPAQGRMQAFSHGFRHEALTRVQSYGPEEPKQGPRK
QSGSHLAPRIKHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDSN
PMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWNS
PWEMPSAAEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVTKL
RSCH
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatggtcgatggtggagaagctcaaaatggaaaaacgcccatgcagggaggag
aacattgactcaagcaaggcccagcatgccagtgatgattctgaggacggaagcagctca
gaaagcgaatccgaagagcagcaacaccagagggttcaggtgaacaacagcaggtgtaag
aagagggagcccttagctgttgcaaaaccccaccgacagctctgtcgctctccatgcctt
gaccggcccagtttttcccagagtagcactgcgcaagattgtcgtgaggatgaccccagt
gcgggacccgggatcaagcctgccagtggcagagagtaccagactaagatggaatttgca
ttgaagttaggctattcgggagagcaggtggagacagtgctcaacaagcttggatctgct
gcgcttattaacgaccttctagcagagttagtaaggcttggaaacaaagtagagcctgaa
attcaaccctgcatcagtacggccacatcaatatcacggcccccctgtgttaaggagacg
gttagtccagaggtgtcggtggaagacgactctgtggatacctttgataacctcaggccc
atcgtcattgatggctcaaatgtggcaatgagccatggaaacaaagaagtattctcttgt
cgtggtatccaacttgctgttgaatggttcttggagaaaggacacaaagacatcaccgtg
tttgtcccagcctggagaaaggaacagtccaggcctgacgccctcatcacagatcaagaa
gtattacgcaaactggaaaaagagaagatcctggttttcaccccatctcggagggttcaa
ggcaggagagtggtgtgctatgatgatcgcttcatagtgaagctgtcttatgattctgat
ggaattattgtgtcaaatgacaactacagggacttgcaaaatgagaagccggagtggaag
aagttcatagaagagcgtctcctaatgtactcatttgtcaatgacaagtttatgccacct
gatgatccattgggaagacacggtccaagtttagaaaatttcctccgcaggcgtcctgtt
gttccagagcacaaaaaacaaccatgcccctatgggaaaaagtgcacatatggacataag
tgcaagtactatcatccagagcgtgtcaaccagccacagcggtcagtggctgatgaacta
cgggcttttgccaaattgtctgcggtgaagacaatgagtgagggggctttagctaaatac
ggtactggtccagcaactgcaaagggggacagcaactctgaggtcaaacatgtggcacca
aaacgtcaatctgaccccagtattcgctcagtggcctgtgaacctcccgaggcgctgtcc
gttgctaggaagtctgagacaaattcagtgccttcccttgtgtctgctctcagcgtgccc
accatgcagcctgtcaagagccacgcagctggggccttgaacacacgatcagccagcagc
ccagtgccaggttctttgcagttcgcgcacagttccatgtctagtgtacagtaccctcct
attttagttactaatagtcatggcgcctctattacgtacggtgaacagttcccaaagtat
gactcggttagcgaccatggttattattcactgcacagtgatttttcaaacatgagcatg
agcagcatgcataatgtcgacagtttctgtagcatggagcacgagcatggtgtgtatcag
agaaatcccagccactgccctgaatcctgcctcagccattcaaacagtgactccttctcc
tcttatggggacctgtacccgagctccatggacagtagcttagaggagagcatgaagggg
cagcagcagcagtctcctgcccagggtaggatgcaagctttctcccatgggtttcgtcat
gaagcactgaccagagtacagagttatggacctgaggaacccaagcaaggcccccgtaag
cagtctggatctcatctggcaccacgtatcaagcatgtggcagtgggagccaggtccagc
tgtcctggagactatcccctcactcagaatgtcctcccacctttgtcctcacagcccaca
cggtctcttggtatgactcgtatggacagcatatccgattcaaggctgtatgatagcaac
ccaatgagacagaggcgacctccactgtgccgtgagcagcatgcaagctgggaccctctg
ccatgtggtaatgagtcctatggctatcattcatatcctttgagtaacagcctgatgccg
tgttgcgagcgggtgatggtccgcagcatgccagacaaaatggaacaaatctggaactca
ccatgggagatgccatctgcagctgaacaccaggagcggtatgtcatcccagaccaccag
tatcaaacatatcggaacctttgtaacatctttcctgcttacgtagtccactcggtaatg
gagaagaatcctcatttaacagatccacaacaacttgccgccgtcattgttacaaaactg
aggtcatgccattag
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