Perca flavescens (yellow perch): 114567173
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Entry
114567173 CDS
T07494
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04140
Autophagy - animal
pflv04148
Efferocytosis
pflv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114567173 (vps11)
04148 Efferocytosis
114567173 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114567173 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114567173 (vps11)
Membrane trafficking [BR:
pflv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114567173 (vps11)
Hops complex
114567173 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
Beta-prop_EML_2
ADIP
TPR_GEMI5
zf-ANAPC11
ToxA_N
zf-RING-like
TSGP1
Beta-prop_RSE1_2nd
Kbp-5
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
114567173
NCBI-ProteinID:
XP_028451932
LinkDB
All DBs
Position
13:2856176..2873019
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AA seq
926 aa
AA seq
DB search
MAAFLQWRKFVFFDKETVKDPVDNGKNFVFPSGISACDSGRGHIVLGDMDGKIWLLTRSL
QLTSFQAYKLRVTHLYQLKQHSILVSVGQDEQGINPLVKVWNLEKRDSGNPLCTRIFPAI
PGSKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPVTGLAFR
QVAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCALRCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLIRDAKSPNKTEFGSRENSPSDKQLLTIYD
LDNKFIAYSASFDDVIDVVAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
AYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHV
PEGTTLLLKGLCTNYQPSGDTAEKDSLGRGLVNKANSEEFIPIFANNPRELKAFLEHMIE
VDPRSPQGVYDTLLELRLQDWAHEQDPVRKKVLQGEAVSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
TYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIRQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGNLEVNLQRDLLIHTKRNC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagaaaatttgttttctttgacaaagaaacggtgaaggat
cctgtggataatgggaaaaactttgttttcccaagcggaatatcggcttgtgactccggc
cggggtcatattgttctgggagatatggatggcaaaatctggcttctgacgcgctccctg
cagttgacatcttttcaggcctacaagttgcgggtaacgcatctctaccagctgaagcag
cacagcatccttgtgtcagtggggcaggatgaacagggaataaaccctctagtaaaggtc
tggaaccttgaaaagagagacagtggaaatcctctttgcactaggattttccccgcaatt
cctggcagcaaaccgactgaagtgtcttgcctcagtgtacacgaaaacctcaacttcatg
gctattggcttcacagatggcagtgtggttttgaccaaaggtgacatcaccagagatcga
cacagtaaaactctgactctgcacgagggaaccagtccagtcacaggccttgctttccgc
caagtggcaaaggtcacacatctgtttgttgccactctggagaaagtccattgctacacc
ctgtccatcaaggagtatcccaaagtagagttggacacccacggctgtgcactgcgctgc
tcctccctggcagatccctcccaggactcccagttcatcgtggctggggatgaatgcgtc
tacctgtaccagcctgatgaacgagggccctgctttgccttcgatggacacaagctgttg
gcccactggcaccgcggatatctgtttttactcatcagggacgcaaagtcacccaacaag
acagagtttggtagcagggagaactctccatcagacaaacagcttctgaccatctatgac
ctggacaacaagttcatcgcttacagtgcctcttttgatgatgtcatcgatgtggtggca
gagtggggctccttctacatcctgaccagagatggaaaaatgtttgttcttcaggagaaa
gacacgcagaccaaactggagatgctgtttaagaagaacctgtttgtgatggccataaac
ctggcgaagagccagcaccttgacagtgacggcctgtcagagatcttcagacagtacggt
gatcacctttacctgaagggagaccatgacggtgccatccagcagtatattcgcaccatt
gggaaactggagccatcgtacgtgatcaggaaattcttggacgcgcagaggatccataac
ttgacggcatatctgcaagccctgcacaggcagtccctggccaacgctgaccacaccacg
ctgctgctcaactgctacaccaagctgaaggacagctccaagctggaggagttcattaag
agcagtgaaagtgaggtccactttgacgttgagatcgccatcaaggttcttcggcaggcc
gcctaccacagccacgctgttttcttggctgagaaacatatgcaccatgaatggtacctg
aagatccagctggaagacctcaagaactatcaggaagggctgcgttacattggacgtctg
ccttttgaacaagctgagagcaacatgaagcgttacggaaaaacgctgatgcaccatgta
cctgaaggtaccacgctgctcctgaagggtttatgcaccaactaccaacccagtggagac
acagctgagaaagacagcctgggtaggggtctggtcaacaaggccaactctgaagaattc
atcccaatttttgccaacaacccccgtgagctgaaagccttcctggagcacatgattgag
gtggacccccgttctccccagggtgtgtacgacacactgctggagctccggctacaagat
tgggcacacgaacaggaccctgtgagaaaaaaggtcctgcagggggaagctgtgtccctg
ttgaggagcgacaacactgtgtttgataaggccctggtcctctgccagatgcacaacttc
aaagaaggcgtcctctacctttatgagaagggcaaactgtaccagcagattatgcactac
cacatgcagaatgaggagtatggaaaagtggtagaggcctgcaagcgctatggggatcag
gagggttgcctttgggagcaggcgttgggatactttgccagaaaagaagaagactgcaag
acctacatcagtgaggtcctacatcacattgaccaaaacaacctgatgcctccattactt
gtggtgcaaacactggcacacaactcgacagccactctctccgtcatcaaggactacctc
atcaataagctgcagagggagagccagcagatagaggacgacgaacgcaaaatccgccag
taccgcgaagaaacagctcacctccgctctgagatccaggagctcaaaaccagtgctaag
atattccagaagaccaagtgtaacatgtgcaacagccccctggagctgccgtctgttcat
ttcctgtgcagccactctttccaccaacactgcttcgaaagctacgccgagagtgaggcg
gagtgcccgacctgcactcccgagaaccgtaaggtcatggacatgctgcgtgcccaggac
cagaagcgggacctacatgaccacttcaacagacagttacgcagctctaatgatggtttc
tctgtcgtggctgactattttggtcgaggagtgtttaacaaactgactttggttaccgac
ccgcctggcagcaaaaccgttgggaatctggaagtcaacctgcagagagaccttctcatc
cacaccaagagaaactgttaa
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integrated database retrieval system
