Perca flavescens (yellow perch): 114567210
Help
Entry
114567210 CDS
T07494
Name
(RefSeq) transcription factor SOX-30-like isoform X1
KO
K09271
transcription factor SOX15/30
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114567210
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114567210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114567210
NCBI-ProteinID:
XP_028451990
LinkDB
All DBs
Position
13:19570880..19573801
Genome browser
AA seq
396 aa
AA seq
DB search
MDIYLKQRKREPRLPSRNTGRDPAATPAFQFFQTGDAGQIPTLVGTGYRPRSNICENYVA
LVGASCEFDDGKLPPISTLFNKLLYKGVSAEVSGSGVRSETVTSGSCPEAGSQVSAVKLL
PSGDQIFPLQVTEKLDKRQASTAGENWLNPDPVHLTTSLGGDSPVTTYTILPTEEDLKQL
QSGQDKNGHIKRPPNAFIVWSHIHRNALRKTHPGANMTDISTVLGCEWSKLSEEQKWPYY
EMAHKLKYMHRQQFPDYEFRPQKKKDIECLSSGQGAGQDPGVSFSQAVPPAQSQLQGPSV
YPYPAMMAYRVSYYPASCPYHQMGPYSRVQSNCPRVFYRYPNAYSSTKEVRNYHNTLHQT
ASESIEQPDIVTSQQLSVNNKVGCKYEDDVDVFGLL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggacatataccttaaacaaagaaaacgagaaccgcgtctgccatccagaaacactggc
cgggacccagcggcgacgcccgcttttcagttctttcaaaccggagatgctggtcagatt
ccaacgctggtcgggactggatataggcctaggtccaacatttgtgaaaactacgtggcc
ttagttggagcaagttgtgaatttgatgacggaaagcttccacccatatcaactcttttt
aacaaactactttataaaggtgtgtcagcggaggtgagtggcagcggggtcaggtcagaa
actgtcacttcaggttcatgtccagaagcaggttctcaggtcagtgcagtgaagctgctt
ccatctggagaccagatattcccgctccaggtcaccgagaagctggataagagacaggcc
agtacagctggagaaaactggctgaacccagatccagtccacctcacgacctcactcgga
ggtgatagtccggtcaccacttacaccatcctgccaacggaggaagatctgaagcagttg
cagtctggccaagacaagaatggacacattaaacggccaccaaatgcctttatcgtgtgg
tctcatatccaccgaaatgccctgcgcaaaacccatcctggagccaacatgacagacatc
agtactgtgctgggctgtgagtggtccaagctcagtgaggaacagaagtggccctactat
gaaatggctcacaaactgaaatacatgcataggcagcaattccctgattatgagtttcgc
ccccagaagaagaaagacatagagtgtttgtcctcagggcagggagcaggacaggaccct
ggcgtttccttctcacaggccgtgcctccagctcaatcccagttgcagggccccagcgtg
tacccatatcctgccatgatggcctacagagtgagctactacccagcttcttgcccatat
catcaaatgggcccctactccagggtccagtccaactgtccaagggttttttacagatac
ccaaatgcctacagctcaacaaaggaagtgaggaattaccacaacactctgcatcaaacc
gcatcagaaagcattgagcagcctgacattgtcaccagtcagcagctttcagtcaacaac
aaagtagggtgcaaatatgaggatgatgttgatgtttttggactgctctag
DBGET
integrated database retrieval system
