Perca flavescens (yellow perch): 114567279
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Entry
114567279 CDS
T07494
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114567279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114567279
03036 Chromosome and associated proteins [BR:
pflv03036
]
114567279
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
114567279
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
114567279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
114567279
NCBI-ProteinID:
XP_028452111
LinkDB
All DBs
Position
13:12810372..12832242
Genome browser
AA seq
1902 aa
AA seq
DB search
MSAAMLSTTTSKLNVLVNKLHEYMAHSTVEDSNGLPTSEDADDILFKGLTNRSCSVGNST
EHAATKAGVDTKYSRRKPSVVIKHSGLDESGDSSASEDFDLPVNANGHPDITRLPKGTVL
VRPEAVDNGRDDFRGPEFRSRKSGVLSRRRGGVEHMGIVSCTACGRQVNHFQRDSFYRHP
ALKVLICKSCYKYYLSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGR
KELSGILESKWYCYVCSPEPLFDLVVACDSVLENMEHLWYQQRKKNRVEPEKSELYHMLP
HLPQNIPLDTWDHTGMDGNVVFNYNTLQISKDLTKKAKHLVDSTNILNRTFVNFIHTVTT
NKQTPAVRNLYLNSFLSVVKGLRKSLAALEDSLKEEFSDLDVMSCWQKLFSDDFDAQPVT
EADTDISDERCLRDLQKLAAEHLEDYDSDSKGCTDGRTAHACTGENMDSDLNDARQSAQK
IGLKPSESGFNMTKKLVVKLTPVPMEQGPSSDAPKIETDIHANDKKSEVKDVSEDEETGA
KADSKMSNDNSSASLHPEEEQGNRRSPRVKTTPLRRPSDVKAKTSRSAADSDSDSDPEET
SSTVPAKNTEEQSPSRARDDSDSDEVPAALLERAAMTQSSDEPQSDENGGEASTKVAKKC
LFWLTKNTPISPEKMRCKRKMLDRSPESDSSNRRVKSRRESGTDSSSDDVESQKKIKHLN
TLRPIGKSHLVKREDQDVARKQGRIQAGKSKAKTRRKAMESSSSTSEDEDDDDDFESEGS
DQKMKPITEDVALLGAAAFHQSSGDEEQSGPSWAAEDDDDPENRIAKKMLLAEIKANYSS
GEDISSDEETQDDESDSEGEKELKQGNKDNETDENGEDMASDSSDTTCDGPNSRHHLLRH
KLTLDEGTPSDKALAESDVGKPESKRKASRKHLGSDSESDGDSNESEPEDLGISEELSQS
EDEAGEDGLRSSRLSSKEKEALRSYEKKIKVPCIWLSDSSSEKSDKEDGDENSDSKGTPK
GRKKIRDIIEDENLRAETQEALREEEERRQRLAERKQQMEDRRETIDGKDELSQVACPIT
TKLILDQDEETKNPVVQVHRNLVTRLKPHQVDGVQFIWDSCCESVKKANSSPGTGCILAH
CMGLGKTLQVVTFLHTVLLSKNLKFRRALVVCPLNTILNWVSEFKKWQNNMGQDKVIVTE
LATKKHPAERLRALQRWQSDGGVMIMGYEMYRILSQAQKMNEECKKELQSILVDPGPDFV
VCDEGHILRNEATNISKSLNAIKTQRRVVLTGTPLQNNLNEYHCMVNFIKKNLLGSLNEF
RNRFINPIQNGQCADSTSRDVRIMKKRAHVLHAMLVGCVQRRDYSELTQFLPPKYEYVLA
VRVSPLQYTLYRYYLDHVTSMGSVTNRTTGRAGANLFKDFQVLSKIWTHPWCLQLNFISK
ENKGYFEKKRIKEAARLRKEETTVVERGLRENEGQDGNIDDSNTAVIVGKKATISSKSQS
LDEGWFKNLLTEEDAKILEHSGKMVLLFEILRMAEDLNDKVLVFSQSLISLDLIEDFLNT
FHHARDPSSFQAGSWIKNVDYYRLDGSTSAPLRKKWADHFNNASNHRGRLFLISTRAGSL
GINLVAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTMEEKIYDRQVTK
QSLSYRVVDQQQIERHFTLFELTELYVFEPDLLGDANSKKSKRTTPVLPKDHVLAQLLQT
CKDQIVSFHEHESLLDHKQEEELSEAERKDAWAEYEAESTNPPPSSSLNILDTKTNEQLM
ELLNRSRANVAEAFMTMQRTTSHTIEDYMLRVWQQNPQLPEATVKTKAKIWKVSDEKEKE
RRQAFYQDIFAQQQTLTHSIQAILKNRRKQPTTTTVSQPGQT
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcgatgctgagcaccactaccagcaagcttaatgtattggtcaacaaactg
cacgagtacatggctcattctactgttgaggacagcaatggcctgccaacctcagaggat
gctgatgatattctttttaaaggtctgacaaacaggagctgttctgtgggaaactcaaca
gagcatgctgcgacaaaggctggagtggacaccaaatactcaagaagaaaaccatctgtt
gtcataaagcattctgggctcgatgaatctggggactcaagtgcaagtgaagattttgat
ttaccagtcaacgcaaatggtcaccctgatatcactagattgccaaaaggcactgtattg
gtgaggcctgaagctgttgataatggaagagatgacttcaggggtcccgagtttcgcagc
aggaaatcaggtgtactttcgagaagacgtggaggagttgaacacatgggaattgtcagt
tgcaccgcatgtggccgacaagttaaccacttccagagagattccttctatcgacatcca
gctctgaaagtacttatttgcaagtcttgctacaaatattacttaagtgatgacatcagt
aaggatggagatggaatggatgagcaatgcagatggtgtgctgaaggaggcaacttgatc
tgttgtgacttctgtagtaatgcattctgcaagaagtgtattctaagaaatttaggaagg
aaggagctgtctggcatcttagagagcaaatggtactgctatgtgtgtagcccggagccc
ctttttgacctggtggtggcctgtgacagtgtcctcgagaacatggagcatctgtggtat
cagcagcgcaagaagaaccgagtagagccggagaaatctgaactttatcacatgttgcca
cacttgcctcaaaacattcctttggatacatgggatcacactggcatggatggtaatgtg
gtgttcaactataacacactgcagatttctaaggatcttaccaaaaaggccaaacattta
gtggactcaactaacatcttaaaccggacatttgtcaatttcattcatactgtgacaaca
aacaagcaaacacctgctgttcgcaatctgtacttgaactcctttttgtcagtagttaaa
ggtttgcgaaaatcacttgcagcactcgaggatagccttaaggaagaattcagtgacctg
gatgtcatgagctgttggcaaaagttatttagtgatgactttgatgcacaacctgtaaca
gaagcagatacagatatctctgatgaaagatgcttgcgtgacttgcagaaattggcagct
gaacatttagaagattatgattctgactccaagggctgcacagatgggagaactgcacat
gcctgcactggtgaaaacatggattcagatttaaatgacgccagacagagtgcccaaaaa
attggcctgaagccttctgaaagcggtttcaacatgactaaaaaactagtagtaaaactt
acgcctgtaccaatggagcaggggccatcctctgatgctccgaagatagagacggacatc
cacgcgaacgataagaagtcagaggtaaaggatgtatcagaagatgaagagacaggtgct
aaagctgacagcaagatgagcaatgacaactctagtgcatctctacacccagaagaggaa
caaggcaatagacgatctcctcgcgtgaagacaacacctttgcgtcgaccaagtgatgtc
aaggccaaaacgtctcgttcagcagcagacagtgacagtgactctgaccctgaggaaacc
tccagcacagtaccagccaaaaacacagaagaacaaagtccgagcagagcaagagacgac
tctgactccgatgaagtccctgcagctctgcttgagcgagcagctatgacacaaagctct
gatgaaccccagagtgatgagaatggcggagaagcatcaactaaggtggccaagaaatgt
ctcttctggctcactaagaacaccccaatctcaccggagaagatgcgctgcaaacgtaag
atgctggaccgttcccccgagtctgactcaagtaacagaagagtaaaatctcgaagagaa
agtgggacagattcctctagtgatgatgtggaatcgcagaagaaaataaaacacttgaat
acgctgaggccaatagggaagtctcaccttgtcaaaagagaggatcaagatgtggctaga
aagcagggtaggatacaggctggaaagtctaaggctaaaacgcgtcggaaagcaatggag
tcgtcatcgtccacaagcgaagatgaagatgacgacgatgactttgagagtgaaggaagt
gatcagaagatgaagccaatcactgaagatgtggccttactgggagcagcagccttccac
caatcttcaggagatgaggagcaatctgggccctcgtgggcagcagaagatgatgatgat
ccagaaaatagaatcgctaagaaaatgctattggctgaaatcaaagccaactactcctcg
ggcgaagatatctcttcagatgaggaaacgcaggatgatgaatctgactcggagggtgag
aaggagttgaaacaaggcaataaggataatgaaacggatgaaaatggagaagacatggca
tcagattcatctgacaccacgtgtgatgggcccaactccagacaccatcttctccgccac
aaactaaccttagatgagggaacaccaagtgacaaggccctggcagagagtgatgtagga
aagccggagagcaagcgaaaggccagcagaaaacacctgggctctgatagtgaaagtgat
ggtgacagtaacgagtctgagccagaagatcttgggataagcgaggagctgagtcagtct
gaggatgaggccggtgaagatggactcagaagctccagattatccagtaaagagaaggag
gcattgcgtagttatgaaaagaagataaaagtgccctgcatttggttgtccgactccagc
agtgaaaagagtgataaagaggatggagatgagaacagcgacagtaaaggcacaccaaaa
gggcgcaaaaagatccgggatatcattgaagatgagaatctccgtgctgagacccaggaa
gccctcagagaggaggaggagagacgtcaaaggttggcagaaaggaaacaacagatggag
gacaggagagagacaattgatggaaaggatgagctgtctcaagtagcgtgtcccatcacc
accaagctcatcctggatcaagatgaggaaaccaagaatcctgttgttcaggtgcacagg
aacctggtgacgagactgaagcctcaccaggtggacggagtccagtttatttgggacagt
tgttgtgagtctgtgaagaaagccaactcctcccctggtacaggctgtatactggcacac
tgcatgggcctggggaagactctgcaggtggtaactttcctgcacacggtgctgctgtca
aagaacctgaaattcagaagggccctggtcgtgtgtccacttaatactatcctcaactgg
gtcagcgagttcaagaaatggcaaaacaacatgggacaggataaagtgatagttacagaa
ctggctacaaaaaagcatcctgcagaacgactcagggctctgcagcggtggcagagcgac
gggggtgttatgataatggggtatgagatgtaccgaatcctgtcacaagcccagaaaatg
aatgaggagtgcaagaaagagttacagagcatactggtggatccaggtccagactttgtg
gtttgtgacgaaggacacattctgcgcaacgaagcgaccaacatctccaaatctttaaat
gctatcaagacccaacgaagagtggtgctaactggcacaccactacaaaacaacctaaat
gagtaccactgcatggtcaatttcatcaaaaagaatctactgggctcactgaacgaattc
cgaaaccgtttcatcaaccccatacagaacggccaatgtgctgactccacatcaagagac
gtccgaatcatgaagaagcgagcacatgtgctccatgcaatgttggtcggatgtgtccag
agacgagattactcagagttgactcagtttctgcctcctaaatatgagtatgtgctggca
gtgagggtttcaccacttcagtatacgttgtatcgctactaccttgaccacgtcaccagt
atgggctccgtgactaacagaacaacagggagggctggagcaaacctgttcaaggacttt
caggtgctcagcaaaatttggactcatccctggtgccttcagctcaacttcatcagcaaa
gaaaacaagggatattttgaaaagaagagaattaaagaggcagctcggttgagaaaagaa
gaaaccactgtggttgagcgtggactgagagagaacgaaggacaagacgggaatatcgat
gacagcaatacagcagttattgttggaaagaaagcaaccatcagctcgaagtctcagagt
ctagatgagggctggttcaagaatctgctgactgaagaagatgccaaaatccttgagcac
tctgggaagatggtgctcttgtttgaaatcctcagaatggctgaagacctgaacgataaa
gtgcttgtgttcagtcagtcgttgatctcattagacctaattgaggatttcctcaatact
tttcaccatgccagagacccatcctcattccaagcgggtagctggattaaaaacgttgat
tactatcgtcttgatggttccaccagtgctccgctaaggaagaaatgggcagatcacttc
aataatgccagcaatcatcgcggccgattgtttctcatctcaacaagagccggctcactt
ggcatcaacctcgttgccgccaaccgggtcatcatctttgacgcctcatggaatccctca
tatgacatacagagcatatacagggtgtaccgcttcggtcagctcaaacaagtgtttgtg
taccgcttcttggctcagggcaccatggaggagaagatctacgatcgccaggtgaccaag
cagtctttgtcctatcgagtggtggatcagcagcagattgagaggcacttcacccttttt
gaactgactgaactttacgtgtttgagccagacctgctgggcgacgcaaactctaagaaa
agcaaaagaaccacccctgttttgccaaaggatcatgtcctagcacagctattacaaacc
tgtaaagaccagatagtgtctttccacgagcatgaatctctgctggaccataaacaagag
gaggagctcagtgaggcagaacgcaaagatgcctgggccgagtacgaggccgagtctacc
aaccctccacccagctcgagcctaaacatcttggatacgaagaccaatgaacagctaatg
gaattgctgaacaggagcagagcaaatgtagcggaggcctttatgacaatgcagaggaca
acttctcacaccatcgaggattacatgttacgagtgtggcaacagaatcctcagctgcct
gaagccacggttaagaccaaagctaagatttggaaagtgtctgatgagaaggagaaggaa
cgtagacaggccttttatcaagacatttttgcacagcaacaaacacttacacatagcatt
caggccatactgaagaatcgaaggaagcagccgaccacgaccactgtgtcccagcctgga
cagacttga
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