Perca flavescens (yellow perch): 114567299
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Entry
114567299 CDS
T07494
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114567299 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pflv01009
]
114567299 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114567299 (ncor1)
Protein phosphatases and associated proteins [BR:
pflv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114567299 (ncor1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
114567299 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
114567299
NCBI-ProteinID:
XP_028452155
LinkDB
All DBs
Position
13:complement(9676335..9736076)
Genome browser
AA seq
2387 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQNRYPPHSVQYTFTGTRHQQDFAIPDYRNHMQDAQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSISSQSEHEALDSKRPRMETVAEAHITRTPATAGGIVL
PVNHTVQDSLRATVEVKKEFQFTVKVESPSSVGPSLHLGDEQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLLDDP
MKVYKARQFMNVWTEHEKEIFKEKFIQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEDKSDDKNEEDKSEKSDKKEEEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPPA
PEPALPDPPQLPKSDPMQKSMKEPAKPQTPVVSMDANKAGAGETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEG
LATVSPDDDDDDDDDDDDDDNADDSEGGDNSSDTESAPSPSQSTDSKRADRTAGDAHCSD
QDKGQASNGKALEPLYGGLCVKEEKSPESETGSQEEKARMTSYTGSVHPKTEPQDVDMKT
GEVQVKMEPELKERGEKGDHGERHGEINSDNDSSATCSADEDVEAEPERQRIFSMERPTL
LNPPGSVLVSSPKQTQLNIQQMQHRAATIPPMVHGPFGPGGVPISGFAMLQHQIKAVHES
AHQEEKQRQDQGDLERRPPFNTRSPTVIDRDGKPLPYMPYDMKLALDQEVHSGRPGSPYR
LSPRELSKASPQPDPNAPNASRYSVPPVLHPAPNQLVQSMADGVRVTFSRPSRPPNIPSP
PPLIPTTKPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSNVGSISLGLPRQQDPNK
PGAAVPSIQDGRGNQAKMGEGLTMRGSITQGTPALPQSSIAADLLKGTEDLSSQDKARGE
QLSKGHVIYEGKSGHILSYDAIKNPRENTRSPRSGHEMKRTYDMMEGPMSRGHPGREGAP
FEGLISRALPREGLHGDSKERPLITGSIMQGTPRTAAETYEDAMKYGKQIKLESPPIRSF
EGGIGKGKPYEGVNTIKEMGRSIHEIPRQDQSGQDICKTPELSDRRVIEGMSQIHPLNQS
TIKHNVKSLITSPSKHPHSMPQLEAMERAKYEESKAVRHTVVNSTASVLRSTHQEAGKSQ
LSPSMYEDANARRTPVNYSTNPVSRGSPMLGRTPEGVVSSAKSAAHERKSAMTPTQRDSV
PAKSPVLGGDPVASHSPFDPHHRPVGPGEVYRAHLPPHLDPTMAFHRVLDPAFMFPRQPS
PTGYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQPVAMPYAAGARGII
DLAQMPPTILLPHHGGTGTPTLERIAYLPGAQPPFPLRAFNPTSISPGHQAHLAAAAAAS
AERERDREQQEKERESRDRERTNEYIRGGVPEQPGRPGSRGYLHSPSPSLRTQQDVVQQR
PSIFQGKSVITSLMPHSAAATAAAQSSSRYSTAADALAALVDAAASAPQMDVAKVKENKH
ERDDDMSTSAAARRAASISEQQEAERRSMQSPYGAMSLPGGKPHPAYSEGPGVGVKDKGH
PTSKSRIEEELRTRGKTTITAANFIDVIITRQIASDKDSRERGSQSSDSSSSLSSSRYDN
TGGGAIEVISPASSPVQPQQDKPEEGQQAAAAGMRAYDISRYRPSGEPPQPSPQQPPSSQ
IDSYSQVPKTHRVMTLADHISHIITQDFARNQDPPPVSSSASATFQSVMAPVSSSGRAKV
SSRYSPENQVQAPHHQRSSSRVSPENAPDKPRARPGKSPERGGRQMENYEPISPPQSYQG
VDKQEVVGPPPQRREADNSEIRTDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLN
SNSGAGDSDVGNAQPGTEIFNLPAVTSSSSINTRNHSFSDPASNLGLEDIIRKALMGNLE
EKPEEHQGGLGAQGAINNTPCTGSEARQEANRSPSMGKQKQGKANSRKSKSPNLGQAYAG
GERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGSMQFPYNPLTMRILSSTPPTSIAS
PSIQSQQQKQLQQQQQQPPPAGAPVAQQRVWQSLLSEQYETLSDSDD
NT seq
7164 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccgcccagccagggcagcttcagcagtgagcagaaccgg
tacccaccacattctgtccagtacaccttcaccggcacacgccaccaacaggatttcgcc
atcccagactatcgaaatcacatgcaagatgcacagggtcggagaagaccatctttactg
tctgaattccaccctggaactgaaaggcctccagagagacgccatggttacgaacagcag
tttcactccatctcatcccagtctgagcatgaggctttggattctaaacgccctcgcatg
gagactgttgctgaggcccacatcacccgcacacctgccactgctgggggtattgtcctg
cctgtaaaccatacagtacaggacagtctaagagccactgtggaggtaaaaaaggaattt
cagtttactgtcaaagtggagtccccgtcctcagtaggaccttcactacacttgggtgat
gagcaggatgcctctccttccaaactatccaaggaggagctgatccagagtatggaccgt
gtagaccgagagattgctaaagtggagcagcagatcttcaagctgaagaaaaagcagcaa
caactggaggaggaagcagcaaagccagtggagccagaaaagccagtgacccctccccca
gtggagcacaagcatcgcagcatagtccagatcatctacgatgagaacaggaaaaaagct
gaagaggcccataaaattctggaaggtcttggtcctaaggttgagctgccgctctacaat
cagccatcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgaggaag
aagctaattttgtttttcaagaggaggaaccacgctcgaaaacaaagggaacagaagatc
tgccagcgctacgaccagctgatggaagcgtgggaaaaaaaggtggagcgaatggagaac
aaccccagacgcaaagccaaggagagcagaacacgggagtactatgaaaggcagttccct
gagattcgcaagcagagagagcagcaggagcgcttccagagggttggacaaagaggaacg
ggcctttctgcaacaatagcaagaagcgagcatgagatttctgaaatcatagatggtctt
tctgaacaggagaacaatgaaaaacagatgagacaactgtcagtcatccctcccatgatg
tacgactctgagcagaggcgagtgaagtttatcaacatgaacggcctgttggatgaccca
atgaaggtgtacaaagccaggcagttcatgaatgtttggaccgaacacgaaaaggagatc
tttaaggaaaagtttatccaacaccctaagaactttggccttattgcctcctatctggag
agaaagtgtgttgctgactgtgtcctttactactatttgaccaagaagaaccacaactac
aagacgctggtgaggcgaaactatggaagacggagaggaaggaaccagcaaataacccgt
ccctcacaagaagacaagtccgacgacaaaaacgaagaggacaaatctgagaaatctgac
aaaaaagaggaagaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaatagccagggccgccgtaagggaaggatcacc
acacgctccatggccaatgaggctgcatctgtggcggctgaagaggcacctccccctgcc
cctgagcctgccttgccagatcctccgcagctcccgaagtctgatccaatgcagaagtcc
atgaaggagcctgcaaaaccccagactccagtagtttccatggatgctaataaagctggt
gctggtgaaaccggagaaacttctcgctggaccgaggaggagatggaggttgccaaaaaa
gggctagttgagcatgggcgaaactggacagccattgccaaaatggtgggcaccaaaagt
gaggcacagtgcaagaatttctatttcaattacaagagacgtcacaacctggacaacctg
ctccagcagcataagcaggacacacggcgggctcgtgctgataggtctcaaggtgaaggt
ctagccacagtgtcacctgatgatgatgacgatgatgacgatgatgatgatgatgacgac
aacgcagatgacagtgaaggcggtgacaacagctcagatacagagagtgctccctccccc
tctcagtctaccgactcaaagagagcagaccgcactgcaggagatgctcattgctctgac
caggacaaaggtcaggccagtaatggaaaggcccttgagcccttatacggaggactctgt
gtcaaggaagagaaaagcccagagagtgagactggatctcaggaggaaaaggccaggatg
acttcctatacaggctcagtgcatcccaaaactgaacctcaggatgtggacatgaagact
ggagaggttcaggtcaagatggagcctgagcttaaggagagaggagaaaagggagatcat
ggtgagaggcatggggagatcaactccgataatgactccagcgccacctgcagtgctgac
gaggatgtggaagcagagcccgaaagacagagaatattctccatggaaaggcctacactg
ctcaaccctccaggctcagtgctggtgtcctcacccaagcaaacccaactcaacatccag
cagatgcagcatcgggcagctaccatcccacctatggtgcatggtccctttggccccggt
ggtgtgcccatcagtggctttgccatgttgcaacaccagatcaaagcagtgcacgagtca
gcacaccaagaggagaagcagaggcaggatcagggagacctggagcgcagaccgcccttc
aacacccgcagccccaccgtaatagacagagatggtaagcccttaccctacatgccttat
gacatgaagctggctctggaccaggaggtccattctggccggccaggctctccctacagg
ctctcccctagggagctgagcaaggcctcaccccagcctgaccccaacgcccccaatgcc
tcccgctacagtgtgccaccagtcctccaccctgcccccaaccagctggtccagagtatg
gcagatggagtccgtgtgacattcagcagacccagtcgacctcccaacattccctctcct
cctccactcattccaaccaccaagcccacggacaagccatccttcattcaaggaggctcc
atctcccagggaactcctggaacatatctgccatcccatgctgtctatgggccagagggg
actaagagcaatgtgggctccatctctctgggtctgcctcggcagcaggatcctaacaag
cctggagctgcagttccatccatacaggatggcagaggcaaccaagcaaagatgggtgag
ggtctgactatgagaggatcaatcactcagggcacaccagccctgccccagtccagcatt
gctgctgacctcctgaagggcacagaggacctgagcagccaagacaaggcaaggggagaa
cagctgtctaagggtcatgtcatctatgaaggcaagagtggtcacatcctctcctatgat
gctatcaagaaccccagggaaaacacccgcagccccagatcagggcatgagatgaaacgc
acgtatgacatgatggagggacccatgagcaggggacaccctggcagggaaggagctcca
ttcgaggggttgattagcagagccttgcccagagaaggtctacatggagattctaaggaa
agaccattgatcacagggtccatcatgcaaggaacacctagaaccgccgcagagacttat
gaagatgccatgaaatatggaaaacagataaagctagaaagcccaccaatccgctccttc
gaagggggtattggcaagggcaagccctacgagggagtcaatactatcaaagagatggga
cgctccattcatgaaatccccagacaagatcagtctggccaggacatctgcaagacccct
gaactgtcagacaggagagttattgagggcatgtctcagattcaccctctcaaccagtct
actatcaagcacaatgtcaagtccctcatcaccagtccgtctaagcatccccacagcatg
cctcagctcgaggccatggaacgagccaaatacgaggagagcaaggcagtacgccacact
gtggtcaactccaccgcctctgtcctgcgctccacacaccaggaggccggcaaatcccag
cttagcccaagcatgtatgaggacgccaacgctcgcaggacgcctgttaactacagcacc
aatcccgtttcgagaggatcacccatgttgggacgtacaccagagggtgttgtgagctct
gcaaaatctgctgcacatgaaagaaagagtgccatgaccccgacacagagggacagtgtc
ccagccaagtccccagtgttgggtggtgaccctgtagcctctcacagcccctttgacccc
caccaccggcctgttggtcctggggaagtttaccgagcccacctgcctccacatctcgac
cccaccatggcctttcacagagtgctggatcctgcattcatgttccccaggcagccatct
ccaacaggctaccacaacacctaccagctgtacaccatggagaacacgcggcagacaatc
ctcaacgattatatcacttcccagcagatgcaagtcatccgacctgacatggcccgaggg
ttgtcaccacgggaacagcccgtcgctatgccttacgcagccggagctcgagggattatt
gatctagcccagatgcctccaactatcctgttgcctcaccatgggggaacaggtactccc
actttggaacgcatcgcctacctccctggagctcagccccctttccctcttagggctttc
aacccaacctccatatcgccaggccaccaagcccaccttgctgctgcagccgctgccagt
gcagagagggagcgtgaccgggagcagcaggagaaagagagggaatcgcgagaccgggag
agaaccaacgaatacatccgcggaggtgtaccagagcagccaggccggccagggagtcga
ggttatctgcattccccttctccctcgctcaggacacagcaggatgtagtgcagcagcgg
cctagcatcttccagggcaagagtgtcatcacctctctaatgccccattcagcagcagcg
acggcagcagcacagagtagctcccgctacagtactgcagctgatgctctggctgctctg
gtggatgctgcagcctctgccccgcagatggacgtggccaaggtgaaggaaaacaagcat
gagcgggatgacgacatgtctacgtcggctgcagctcggcgagcagccagcatctccgaa
cagcaggaggcagaaaggcggtccatgcagtcaccctatggtgctatgtctctgccagga
ggtaaaccccatccagcttactctgagggccctggagttggggttaaggataagggccat
ccgacctcaaagtcccgcatcgaagaggagcttcggactcgtggaaagacgaccatcaca
gctgctaacttcatcgatgtcatcatcacacggcagatagcctcggacaaagactcacga
gagcgaggctctcagagctctgactcctccagcagcttgtcatccagtcgatacgacaac
actggtggaggagccattgaggtgattagtcctgctagttcaccagtccaaccacaacag
gacaaacctgaggaaggacaacaggcagcagcagctggcatgcgggcctacgacataagt
cgttaccggccatcaggggagccaccacagccgagtccccagcagcccccctcatcccag
attgacagctactcccaggtccccaagactcaccgggtcatgaccttggcagaccacatt
tcgcatatcataacccaggacttcgcccggaatcaggaccctcctcctgtctcctcctca
gcttcggccacattccagagcgtgatggcacccgtgtcctcttcagggcgagccaaggtg
tccagccgctacagtcctgagaatcaggtccaggccccacaccaccagagatcctccagc
agagtttccccagagaatgcccctgacaagcccagagccaggcctggaaaatctccagag
cgaggcggcaggcagatggagaactatgaacccatctctccaccacagagctaccaaggc
gtggacaaacaggaggtggtcgggcctccaccccagaggcgagaggctgacaactccgag
atccggactgactcgcgatccccggggagtgtcagctatctgccttccttcttcaccaag
ctggagaacacctcaccaatggtgaaatccaagaagcaggagatctttcgtaagttgaac
tccaactctggtgccggtgattctgatgttggaaacgcacaaccaggcacagagattttc
aacttgcctgctgttacaagctccagcagcatcaacaccaggaatcactcatttagtgac
ccagccagtaacctgggcctggaggacatcatccgtaaagccttgatgggcaacttggag
gagaaaccagaagagcaccagggaggactaggggctcagggtgccatcaacaacacaccc
tgcacaggcagtgaagcccgccaggaggctaaccggtcacccagtatgggaaagcagaag
cagggcaaagccaacagccggaaatccaagtcacctaacctgggtcaggcctacgctgga
ggggagcgtccctcctcagtgtcctccgtccactctgagggagattatcacagacaagcc
caagcccagccccaatggagctgggacgaccgaccctcatccacaggatccatgcagttc
ccttacaacccgctgaccatgcgcatactgagcagcacgccacccacctccatagcttcc
ccctccatacagagtcagcaacagaagcagctgcagcagcagcagcagcagccgcctcca
gctggagccccggtggcccagcagcgcgtctggcagtctctgctgtcagagcaatacgag
accctgtctgacagcgacgactga
DBGET
integrated database retrieval system