Perca flavescens (yellow perch): 114567337
Help
Entry
114567337 CDS
T07494
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114567337 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114567337 (rnf43)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114567337 (rnf43)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114567337 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
114567337
NCBI-ProteinID:
XP_028452209
LinkDB
All DBs
Position
13:9049277..9143303
Genome browser
AA seq
824 aa
AA seq
DB search
MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPAIRAVIKVTLVNHEPTGKTITLEGVF
AGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPPCLPLLDKARMALDKG
AQAVIFDVSDDANVAAELRKTNSLPRPVVLVEAENAEKLMGLVNKNEEAKVCIEILVEQS
RWPHDVGILLTIVLAILAIVLIFAFRSKCKSNRTLDSVHQQTMRAISRLETKTYSSQGCS
GSQHHQAPWGSASSSNSSPVCAICLEDFQDGQHLRIISCAHEFHKECVDPWLLQHRTCPL
CMHNIMGTERQPQRNRLQQSPEQSQSFLHPQPYSSPHNHPFPQHAIPFSLRPHYPRGPSG
HYPSLGHYTGSSPVDAQTLRFLTSRPLASGCGYHLPAEGPGRPHRIGGNCRTSTHHYTPR
RSCHNYRSSCPAQRSASSSRLHHAASVTPQPRGAPAHSRQDDGSCSGGSYHTERSGYLAD
GPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGRAPR
RNSLEADAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHGQGPSRGSD
EEQEGAAAAAAAAAAAAAPAPLVLDKDLPVCPPKHSPCQCPKPDPTDRPSPGTECQDHDP
SSPAGPPVLVSPIPLQLQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLQDDRSI
HIHYGQGPGFCCSPPELHPALLPVPLILDSGGMEDWPCYAGTHVVWQKRVQQARSEPQLL
GPGTSMDRPPCRFHHGPAADRNTDICLYCQTLHYNQGSEEESGV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggccatccgagctgtcatc
aaggtgacactggtgaatcacgagccgacggggaagaccatcactttggaaggggtgttc
gcgggaggaagtgccggctacgcggagggaaaactaatgcagtatcaccctctgtctctg
tgcaacacaagcgaggatgaacgacaagagagtgacttcatcaccattgtcaaactggag
cacagggtacccccctgtctgccgctgctcgataaggctcgcatggcattggacaaagga
gctcaggccgttatctttgatgtcagtgatgatgccaacgttgccgctgagctgcgaaaa
accaactccctcccccgtccagtcgtgctggtggaggcggagaatgctgagaagctgatg
ggtttggtcaacaagaatgaagaggccaaagtttgtattgagatcctggtggagcagtct
agatggccacatgatgtgggtatcctgctcaccattgtcctagctattctggcaatcgtc
ctaatatttgctttccgctccaagtgcaagtccaacaggaccttggactctgtccatcag
cagaccatgcgggccattagtcgattggagaccaaaacctacagctcccagggctgctcg
ggctctcagcaccaccaggcaccctgggggtcagccagcagctccaactcgagccctgta
tgtgctatctgcctggaggacttccaggatgggcagcatttgaggatcatctcctgcgct
catgagttccacaaagagtgcgtcgacccctggctgctacaacaccgcacctgtcccctc
tgtatgcacaacatcatggggacggagcggcagccccagaggaacagactccagcagagt
ccggagcaaagccagagtttccttcaccctcagccttacagcagcccacacaaccacccc
ttcccccagcacgccatccccttctctctgaggccccactatcctcgtggaccctctgga
cattatccctccctgggccactacaccggctcttctcccgtggatgcccaaacactacgt
ttcctcaccagcaggccgctcgcgtccggctgtgggtaccaccttcctgcagagggaccc
gggaggccccacaggattggaggtaactgcaggacttccactcaccactacaccccacgt
cggtcctgccacaactaccgctcatcttgtccggcccagcgcagtgcatccagctcaaga
ctgcaccacgccgcctccgtcacaccacagccgcgtggagcgccggcccatagccggcag
gacgacggcagctgctcgggtggcagctaccacacagaacgcagcggatacttggctgat
gggccagccagtgactccagctcagggccatgccacggctcctccagcgactcagttctc
aactgtactgacgtgtccctgcagggggtttacggcagctggtccaccttccgtagctct
ctgagcagtgactatgatccgtttgtgtattacgggccagggcctgggcgcgcccctcgc
aggaacagcctggaggccgatgcccaggcccggcccaggtctctggattctgtggtgaac
aaagcgggctgccccgaggagcagccgcagactgtgttcagccacatccactaccaccgc
cacagacaccaccactatgaggagggggagcacggccagggcccgagcagaggctcggac
gaggagcaggagggcgctgctgctgctgctgctgctgctgctgctgcagcggcgcctgct
cctcttgtcctggacaaagacttgcctgtctgccctcctaagcacagcccctgccagtgc
ccaaagccggaccccacagatcggcccagtcctgggacagagtgtcaggaccatgacccc
agcagccctgcaggacctcctgtcctggtttccccaatccctttacagcttcaaccccac
tgctgccaccaggggcacggacaccctcccgctcctcttgggcgagtgggtggctgtgtg
cttgatgggccctctgttcgcttccaccagagcctagatctgcaggatgaccgtagcatc
cacatccactacggccagggcccgggcttctgctgctcccctccggagctgcaccctgcc
ttgctccccgtgcccctcattctggactctggaggtatggaagactggccttgctatgcc
gggacccatgttgtgtggcaaaagcgggtgcagcaggcccgctcagagcctcaactcttg
gggcctgggacctctatggacaggccaccctgcaggttccaccacggccctgctgccgac
cgcaacacagacatttgtttgtactgccaaacattacactacaatcagggatcagaagag
gagtctggcgtgtga
DBGET
integrated database retrieval system
