Perca flavescens (yellow perch): 114567901
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Entry
114567901 CDS
T07494
Symbol
trps1
Name
(RefSeq) zinc finger transcription factor Trps1
KO
K22040
atypical GATA-binding protein TRPS1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114567901 (trps1)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
114567901 (trps1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Znf_C2H2_Trps1_4th
zf-C2H2_Trps1_1st
zf-C2H2_Trps1_3rd
zf-C2H2_Trps1_2nd
zf-C2H2_Trps1_5th
GATA
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
114567901
NCBI-ProteinID:
XP_028452923
LinkDB
All DBs
Position
14:15779100..15906415
Genome browser
AA seq
1561 aa
AA seq
DB search
MISREMVRKKNPPIRSVGGEEEEEEEGRKPAGEEEEEGEEEGRVGAEAERINRPSEPESS
DRIRGDEEPEEEEEEEEGESECVSSSVSPSSVGERYSNEGRGGRRAGGGRAKQGEAALTD
RPESQSEPEDGEKGAEEGERSERDRGRADYLTAPLLSAPLLPPRQEGGEESTTDTPPLSS
SPSPKLQDFKCNVCGYGYYGNDPADLVKHFRKYHLGLHNRTRQDAALDTHILALHNMAPQ
HTPLDIQAGQGQRNQAKELGKTRPDMHIQQHRTVMMNGTYDVQVMLGGTLIGIGRKTSDC
QGNTKYFRCKFCNFTYMGSNSLELEQHFVSSHPNKVKTPPSTPLLATNNMATHDNQGKGR
SQILDGADRVAVRAEDDSLVGYSIPVRACSDSSSWTGELGRDAVQTYYWCKFCSWSCEWS
GGSVKLLEHYEQRHRMSTGGTMSPSNSNPGGMDRERERGGRREGEERGHMPSKSHKDLSS
NPSSTSQGDPNSSDSEAVVTSYNCQLCDFRYSMAHSADVIVVAPLLLHYQHNHSIHRCCI
QHCMYCPQGLCQPHKHLGEVSHPFACRRPTCPKCCSKFPPSTKQQDSIGSKPATATSPSM
TPPNPRGDPGVISGSTFRPYDPAHPVVTQGVTHLCDQCAFATTDIDVLLQHYESCHTLIN
LKGAAPHVKAEEEVGGDKEGGRGGGGEREYSCTKCHFITEVEEEIFRHYRRVHACCRCRR
CDFTAPDSSALLDHFNSVHCHDSSPSLSSLTTTSLPTSLTPSLTHSANGCSAPSTLAIKE
ESKGDLRLLYSLAPPEGLLAEGGREEAGGVVKSEGGEEKEREREKGWVLGETRGLGERGG
EQAHGLLWVPKERMGPERGVERGAGGGSPSLFSSPLSLSFVSANHEALQQKRGVASPSMV
YLGDTKSFLGDTKSFLGDTKLYGGGRLGGACAGGGGGEKQSQMPQQYTGGGGGGGGGGGS
GAGGGQEKGGAAKEESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKL
HSTPRPLNIIKQNNGEQIIRRRTRKRLNPDSLSSETPAPKQQRITSEERMNGEELDRSCA
SIKNQQPSPRSRSPRSTQAFLANQTLEIHRRMPPLLLPSHPPSSLVAEGNGGIAEGGIIS
KVEGGKGGGGSERGSPIEKYMRPSKPSSYSPPGSPIEKYQYPLFSLPLPLTLSPDLTPES
DWLRFWTKYKMAAASGVPGSISNLSSPGSLGNNAHYLGAMVAPVQHHQQSYTVPYCASPY
SPLPPPPAPPHYPPPPLHSQTSSPSLENDAPLDLAIRQRDTSAAHAHMSTNGAERRRQES
PLAERLRENWKGEKEEEEERIDEGGNHREEIGKEDKDHSTKGRSSVALNPAMVDVATQDD
LTNRCIHCGIYFLDEVMYALHMSCHGDQGPYQCSFCLHVCVDRYDFTTHIQRGLHRYTDK
TSQKKGHGQDGVIQNATVMSERECENLTPEEKDEGDQSEITEDSTDVIEVSHDSQAKETT
GNDATDNETEVEKEVRGEAHDVTNQEMGDETVSDSNDDITEATEATTVSESKNLDENTES
N
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcagagagatggtgaggaagaagaatccccctatccggagtgtgggaggtgag
gaggaggaggaagaagaggggaggaagccggcaggagaagaggaagaggagggagaggag
gaagggagagtgggagcagaagccgaacgaataaaccgaccatctgaacccgaatcctcc
gaccggatcagaggagatgaggagccggaggaggaggaggaggaggaggagggagaaagc
gagtgtgtgtcctcatctgtctctccctcatcagttggtgagcgctacagcaatgagggg
agaggggggaggagagcaggagggggcagagccaaacaaggagaagcggcgctgacagac
agacccgagagccagtcggaacctgaggatggggagaagggggcagaggaaggagagagg
agcgaaagagacagagggagggccgattatctcacggctcctctcctctctgctcccctc
ctcccccccagacaggaaggaggggaggagtccacaactgacacccctccactttcctcc
agcccctctcctaaactccaggacttcaagtgcaacgtgtgcggttacggttactacggc
aacgaccccgccgacctggtgaagcactttaggaagtatcacttgggtctgcacaaccgc
acacggcaagatgctgccctcgacacacacatcctggcactccacaacatggctccccaa
cacactcctctagatatacaagcaggacagggacagaggaaccaagccaaagagttgggg
aaaacaagaccagatatgcacattcaacagcacaggacagtcatgatgaatggcacgtat
gacgtacaggtgatgctgggtggcacgctaattgggattggccggaagacctctgattgc
caggggaatacgaagtactttcgctgcaagttctgcaacttcacctacatgggcagtaac
tccctagaacttgagcaacactttgtgtcctcgcatccaaataaagtcaaaactccacca
tccacccccctgctggccaccaataacatggcaacgcacgacaaccaggggaaggggagg
agtcaaatcctagacggggctgaccgagtcgccgtgagagcggaagacgattccttggtc
gggtactccatcccagtgagggcgtgttcagattcgtcaagctggacaggggagctgggt
cgagatgctgtgcagacatattattggtgtaaattctgtagctggagttgtgagtggtca
gggggctcggtgaagcttttagagcactatgaacaaagacatagaatgagcacaggaggt
actatgagccccagcaactctaatcctggggggatggacagagagagggagagaggaggg
agaagagaaggagaagaacgaggccacatgccatccaaaagccacaaagatctatcatcc
aacccatccagcaccagccaaggagacccaaacagcagtgattcagaagcagtcgtgacc
agttataactgtcagttgtgcgatttccggtactcaatggcccatagtgcagatgtgatc
gtagtagcaccgttactactgcactaccagcacaaccactccatccaccgatgctgcatt
cagcactgcatgtattgtccacaggggctctgtcagccacataaacacctgggggaggtg
tctcacccctttgcttgtcggaggcccacctgccctaaatgctgttccaagtttcctccg
tccaccaagcagcaggactccatcggatcgaaacctgctaccgccacctcacctagcatg
acccctcccaatcctagaggggaccccggggtgatttcaggatcaacttttcgcccctat
gaccctgcccatcctgttgtcacacaaggcgtcacccacttgtgtgaccagtgtgcgttt
gctaccaccgacattgacgtgttgctccagcactacgaaagctgccataccctgattaac
ctaaagggggcagcgccacatgtcaaggccgaggaagaggttgggggagacaaggaaggg
gggagaggaggtggaggagagagggagtactcttgtacaaagtgtcacttcatcacagaa
gtggaagaagagatttttagacactacaggcgtgtccacgcatgttgccgttgtcgacgc
tgtgacttcacagctcctgattcgtcagccctcctcgaccattttaactcggtccactgt
catgactcctctccctcattaagctcactgacaacgacctccttacccacctcactgaca
ccttcgttaacacactcagccaatggctgctcagctccctctaccttagccattaaagaa
gaaagcaagggggatcttcgcctcctctactcccttgcaccgcctgagggactgttggca
gaaggaggcagagaagaggcaggaggggtggtaaaaagtgagggaggtgaggagaaagaa
agagagcgggagaaaggctgggttcttggggagacaagaggactaggggaaagaggaggc
gagcaggcccacggtttgctctgggtgcccaaagagcgaatgggacccgaacgaggagta
gaaagaggagcaggaggtggaagcccctctcttttctcctccccactctcattgtcgttt
gtttcagccaatcatgaggccttgcagcagaaaagaggcgtagcttcgcctagcatggtt
tacctgggagacaccaagtcgtttttgggagacaccaagtcgtttttgggagataccaag
ctgtatggcggaggaaggctaggaggagcctgtgcaggtggaggcggaggggagaaacag
agccagatgcctcagcagtacacaggaggaggaggaggaggaggaggaggaggagggagt
ggcgctggaggagggcaggagaaaggaggagccgctaaagaggagtcgcaatcccttcta
cggcgccgcagaggcagtggggtcttctgtgcaaattgtctgaccaccaagacatcgttg
tggaggaagaacgcaaatggaggctacgtctgcaacgcatgtggtttataccaaaaactg
cattcgacacccagacctctaaacatcataaagcagaacaacggtgaacaaatcatccgc
cgccgaacccgaaaacggctcaaccctgattcgctgtcatctgagacccccgccccaaaa
caacaacgcatcaccagcgaggagcgcatgaatggcgaggagttggacagaagctgtgca
tcgatcaaaaaccagcagccttcccctcgctcacgctcaccccgatccactcaagccttt
ctagccaatcaaacattggagatccaccgacgcatgcctcctctgctcctcccttcacat
cccccctcctcattggtagctgagggcaatgggggcattgctgagggagggataatatca
aaagtagagggaggtaaaggaggagggggatcagaaagaggcagtccaattgaaaagtac
atgcgtccatccaaaccgtctagttattcgcctcctggttcacccattgaaaagtatcag
tacccccttttctccttaccccttccattaaccctctcacctgatttgacccctgagtct
gattggctcagattctggaccaagtataagatggcagctgcctctggggttcctggtagc
atcagtaatctaagcagccctggtagccttggaaataacgctcattatctcggtgcaatg
gtggctccagtgcagcatcatcagcaaagctacaccgtgccttactgcgcctctccctac
tctcctctgccccctcctccagcccctcctcactatcctcctcctcctcttcattcccaa
acctcatcaccatcattagaaaacgatgctcctttggatctcgcaataagacaaagagat
acaagtgctgcacatgcacacatgtcaacaaatggtgcagagaggagaaggcaagagtcg
ccacttgctgagaggttgagggaaaactggaaaggggagaaagaggaggaagaggagagg
atagatgaaggagggaaccatagggaggagataggaaaggaggacaaggatcattcgaca
aaaggtcggtcaagtgttgcattgaatcccgcgatggtggatgtggccacacaggatgac
ctgaccaatcgctgcatccactgtggaatctacttcctagacgaggtcatgtatgccctg
cacatgagttgccacggcgaccagggaccataccaatgcagtttttgcctccatgtgtgt
gtggatcgctatgatttcaccacacacatacagaggggcttacacaggtacacagacaaa
acgtcacaaaagaaaggtcacgggcaagacggtgtgattcagaacgccacggtgatgtcg
gagcgcgagtgcgaaaatttgacgccggaggaaaaagatgaaggtgatcagagcgagatc
actgaggatagcactgacgtcatagaagttagtcatgacagccaagcaaaagaaactaca
ggcaacgatgccactgacaatgaaacagaagttgaaaaggaggtaagaggagaagctcat
gacgtaacaaaccaggaaatgggagatgaaacggtgtcagatagtaatgatgacatcaca
gaagccacagaggccacgactgtttctgaatctaaaaacttagatgagaacacagagagt
aattaa
DBGET
integrated database retrieval system
