Perca flavescens (yellow perch): 114567992
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Entry
114567992 CDS
T07494
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114567992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114567992
03021 Transcription machinery [BR:
pflv03021
]
114567992
03036 Chromosome and associated proteins [BR:
pflv03036
]
114567992
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Helix-turn-helix
ARID
114567992
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114567992
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114567992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
114567992
NCBI-ProteinID:
XP_028453111
LinkDB
All DBs
Position
14:complement(28279233..28353272)
Genome browser
AA seq
2318 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKEPGTDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLPRVNNNSSNQNDSGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGNQQPTSTPTLNQLLTSPSS
ARSYPNYPQGDYNNQEGASKGPGDMGSSQYGGVHPGWQQRTHHPPPMSPGNTGQPPNRNQ
PPSPMDQVGKMRGQPYVGPNPYSQQQQGPPTGPVPQQGGSYPGQGYGPPGPQRYPMGMQQ
NRTPGAMGGIQYGQQMSAYGQQGPGGYSQQSQGYYGQHGAPPHPGQQQQQQQPPYTGQPQ
GSSGPPYPQQGHASQPSGQHGQPGPPYQQSQGPHGPPPGQPPYSQPPQSQPGQPPYVPPQ
QQQQQQPQQQQGPGPQSQPGPQGQPGYQQQPPGPGQPPQQQQTPQQQAPPQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQPGGPPSQTQQPPGHGQQGQPSPYSQTPPLQQQQPPPPPQ
QQQQSPYQRFPPPPQELSQDSFSSQSSAPPSNQPMASNKSSQEDGMQARPSSLPDLSGSI
DDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGLRGPSPSPVGSPASV
TPSRTGPLSPAAVPGNQMPPRPPSVQSDTILHSSMNQSAMGQDRVYMRNPQMPPYGSPGQ
PGSALSPRQSSGGQMHAGMGPYPQNNSMGNYGPQGAQYGPQGYPRQPGYTGMPNANYPAG
PGMSGSMNPMPGQASGAPYGSIPPSRIVPGQMGARPFGPGMASNMAGMPPQVASGMCPPP
GMNRKDGGPSMHHGATNSVLNRPPGYPNMSQGMMGTGSPYGPGMNSMHGMMNQGGPGPYP
MGANIANNTPGMAPNSEFGMEKINPTQKINNKVEGTPKPESKKKSSSSTITNEKITRLYE
LGPEPERKMWVDRFLAFAEEKAMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKW
RELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDFFNVDTKKNQPKIQPPS
PAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHTQMPPMPGVRSSSVNLQDPFADGG
DPAFSRRNAMTPNSQGYQPGMGGPEMIARMGPYESNKDPFGGMRKAGEQFMQPGPNSGMG
EQYNRGPPGPMGNMQMGQRQQYPYGYDRRQEPGIGPDGSMGPGAPQPNMMPSGADTGMYS
PSRPPPQQRHESYTNQYPGQGAPPGGPYPNQQPGMYPQQQPNYKRPVDGGYGPPAKRHEG
EMYNVPYSGQQQPGPQPSGPQGQQDMYNQYNAYPGGDRRPPGPQNQFPFPFGRDRGPSSG
GPNSQSPMPPQMMASAMPSGPDGPQGPMWQGRNEMGYPNYPNRQGPPVPGQGPGYHSMNR
SEEMMPADQRMNHEGQWPGHVNQRQPPFGPGGSGPPMTRPLPSTYQTSQNHIPQVSSPTP
MPRPMESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPVQQPMIRRDVAFPPGSVEASQ
PHLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLP
GFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPNAAEDPVDEIPMPEGEDMDVDEE
DEDDEEVEETKASPDALSLVQVKQEDESSHKRTSSEDEEEEKERESSIKEPNGTTPSASS
QDPSLHSEKPKQASKFDKLPIKVVRKKNPFLVNHSSMLGQRQSFDSGLTHWSIGGGDTTE
HIQTHFESRMDLLKQRKRKPTAAESRKKVQATETATESSEKSKSNGEDRPRQQPQSSEPR
KSPAGKTPPPLPIGAPVTATIDDVLSARPGSVTEEVVRGGAEEQKENGKYLFSINPDLQS
RRNIKILEDEPHSKDETPLSTLSDWQDSLARRCICVSNIVRSLSFVPGNDLEMSKHPGLL
LLLGRLVLLQHRHPERKQAPVTYEKEEEEDEGVSCERDEWWWDCLEVLRENCLVTLANIS
GQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPTLGHHSSLSPQRLVLETLSKLSIQ
DNNVDLILATPPFSRLEKLYGTLVRLVGERKVAVCREMAVVLLANLAQGDSLAARAIAVQ
KASVGNLLGFLEDSLAATQYQQSQSSLLQMQGGPQFEPTSVDMMRRAARALHALAKVEEN
HSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6957 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggttgccagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggatcgggacccacaggaggagtcggtaccgggagagaaacagcatgaaaataag
gaaccgggaactgacggcggatctcctggccagaaggagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgacatgaagaacggcaacgggaatttgcccagg
gtaaataataatagcagtaatcagaatgattcaggcgggcccgaggggaataaccatccc
ggaatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggctaccccaac
cattataacaactacagccctttccagaacaggacttcttatcagggccaaggatatggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcaa
cagccagcaggaggaaccacagctatggctgcctcttacaataatcagaggtataacatg
ggaaaccaacaacccacgtctacgccaactttaaatcagcttttgacatcccctagctct
gccaggagctatccgaattacccccaaggagactataacaatcaggaaggggccagcaag
gggccaggagatatgggcagcagtcagtatggtggggtccatccgggttggcaacaaagg
acccaccatccgcctcccatgagcccgggaaacactggacagcctccaaacagaaatcag
cctccaagcccaatggaccaggtagggaagatgcgtggccagccatatgtaggacccaac
ccttactcccagcagcagcaagggcctcccacagggcccgtaccccagcagggaggctct
tacccagggcagggctacggacctccgggccctcagaggtatcctatggggatgcagcag
aaccgaacacctggcgctatgggcggcatacagtatggacagcagatgtcagcctatgga
caacagggacctggaggctacagccagcagagccagggctactatggtcagcacggcgcc
ccccctcaccctggccagcagcagcagcagcagcagcctccgtacactggtcagccccag
ggcagctctggacctccctacccccagcagggccatgcttcgcagccttctggccagcac
gggcagcctggacccccctaccaacaatcccaaggcccccacggccctcctccagggcag
cccccttatagccagcccccacagtcccagccaggacagccaccctacgtccctccccag
cagcagcagcagcagcagcctcaacagcagcagggaccaggtccccaaagtcagccgggc
cctcagggccagcccggctaccaacaacaaccccccggaccagggcagccaccacagcag
cagcaaaccccgcagcagcaagcgcccccccagcaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacagcagcagcagcagcagcagcagcagcagcaa
caaccaggaggtccaccttctcaaacccagcaacctccaggtcatggccagcagggtcaa
ccatcaccttactcccagacacccccactgcagcagcagcagccgccgccgccaccacaa
cagcagcagcagtcaccatatcagaggtttccaccccccccacaggaactctcccaggat
tcctttagctcccagtccagcgctcctccatccaaccagcccatggcttccaacaagagc
agtcaagaagacggcatgcaggcccggccgtccagtctgccggatctgtcgggctccatc
gatgacctgcccacgggtacagagggggccctgagcccgggcgtcagcacctcaggggta
tccagcagccagggcgagcagagcaatcccgcccagtcgcccttctcgccgcacacttcg
ccccacctgccaggcctacgcgggccctcgccgtcgcccgtgggttcccccgccagcgtc
acgccctcccgcaccggcccgctgtcccccgctgctgtgccaggtaatcagatgcctccc
cggccgcccagcgtccagtcagacaccatcctgcactcttccatgaaccagtcagccatg
ggccaggacagggtgtacatgcgtaaccctcagatgcctccttacgggtcccctggacaa
cctggctccgccttatctccacgccagtcttcaggaggccaaatgcatgctgggatggga
ccatatccccagaacaactccatgggaaactacgggcctcagggggcccagtatggtccg
caaggttaccccaggcagcccggctacacggggatgcccaatgccaactaccccgccggt
cccggcatgagcggctccatgaaccccatgcccgggcaggctagcggggctccgtacgga
agcatcccgcccagcagaatagtcccggggcagatgggtgctcggccctttggccctggg
atggcctcaaacatggccggcatgcctcctcaggtggcgtccggcatgtgcccccctcca
ggcatgaacaggaaagatggcggtccctccatgcaccacggagccacaaactccgtactc
aacaggccacctggctaccctaacatgtcccagggcatgatgggaacaggctctccatac
ggccctggcatgaacagcatgcacggtatgatgaaccagggagggccagggccataccca
atgggagcaaatatagccaacaacacccctggaatggcgcccaattcggagtttggcatg
gaaaaaataaaccctacccagaagataaacaacaaagtggagggaacgcccaagcctgaa
tccaaaaagaagtcgagctcatccaccatcactaacgagaagatcactcgtctgtacgag
ctcggcccggagccggagaggaagatgtgggtggatcgattcctggccttcgctgaggag
aaggccatgggcatgaacaacctgcccgcagtgggacgcaagcctctcgatctcttcaga
ctctacgtgtccgtcaaagagatcggcggcctcacccaggtgaacaagaacaagaagtgg
agggagctggccaccaacctcaacgtgggcacgtcgagcagcgccgccagctcgctcaag
aagcagtacatccagtgtttgtacgccttcgagtgcaagatcgagcgcggcgaggacccg
cccccggacttcttcaacgtggacaccaaaaagaaccagcccaagatccagcctcccagc
ccagctggttccggatccctgcaaggaccccagactcctcaatccaccagtagttcgatg
gcagaggggggagacctgaagccccccaccccagcctccaccccacacacgcaaatgcct
ccaatgcctggcgtcaggagtagcagcgttaatctgcaggacccttttgctgatggcgga
gacccagcgttttccagaaggaatgccatgactcccaactcacagggctaccagcctggg
atgggtggccccgagatgatcgctcgaatgggtccctacgagtccaacaaggaccccttc
ggtggcatgaggaaagctggagagcagtttatgcaaccaggccccaacagtgggatggga
gagcagtataacagaggcccaccaggccctatgggcaacatgcagatgggccagaggcaa
cagtacccttatggatacgacagaagacaggagccaggcattggccccgacggcagtatg
ggaccaggagctccccagcccaacatgatgccttctggagccgacacagggatgtactcg
cccagccgccctccaccacagcaacggcatgaatcctataccaatcagtaccctggccaa
ggagctccccctggtggcccatacccaaatcaacagccaggaatgtatccacagcagcaa
ccgaactacaagcgtcctgtagatggagggtatggccccccggccaagcgccatgaggga
gaaatgtacaacgttccctacagtggtcagcagcagccaggaccccagccctcagggccc
cagggtcaacaggacatgtataaccagtataatgcataccctggaggggaccgcagacca
ccaggcccacagaaccagtttcccttccccttcggccgggacagagggccgtcatctgga
ggccccaactcccagtctccaatgcctccccaaatgatggcaagtgcgatgccttcgggt
cccgatggcccccagggcccaatgtggcagggccgcaatgagatgggctacccaaactat
cccaaccgacagggacctcctgtcccaggccagggccccggctaccacagcatgaaccgc
tccgaggagatgatgccggcagaccaacgcatgaaccacgagggtcagtggcccggccac
gtcaaccagcggcagccgccgtttggccccggcggttctgggcctcccatgaccagacct
ctgccatccacctaccagacttcccagaaccacattcctcaggtgtcgagcccaacgcca
atgccccggcccatggaaagcaggacgtcgcccagcaagtccccctacatgcatccgggc
atcaaggtgcagaaagctggacccccagtgcccgcctcccatatcggccaggcccctgtg
cagcaacccatgatcaggcgagatgtagccttccctcctggctctgtggaggcctcccaa
ccccaccttaagccccgcagacggctcaccatgaaagacattggcactcccgaggcttgg
agagtgatgatgtcactaaagtcaggcctactagctgaaagcacctgggccttggacacc
attaacattttactgtatgatgacaatagcatttctacttttaacttgtgccagctgcct
ggattcctggagctggtggtggagtacttcagacgctgcctcatcgagatctttggcatc
ttaaaggagtacgaagtgggagaccctggccagcgcaccctcatagaccccaacgccgcc
gaggaccccgtggatgaaatccccatgccggagggcgaggacatggacgtggacgaagaa
gacgaagacgacgaggaggtagaggaaacgaaggccagtcccgacgccctctcactggtc
caggtaaaacaggaggacgagagctcgcacaaacgcacgtcttcagaggacgaggaagag
gagaaggaacgggagtcttctatcaaggagcccaatggtaccactccctcggcgtcctcc
caggaccccagcctccactcggaaaagcccaagcaggccagcaagttcgataaactcccc
atcaaggtggtgcggaagaagaatcccttcctggtgaaccactcgtccatgcttgggcag
cggcagagctttgatagcggcctgacgcactggagcattggcggcggcgacactaccgaa
cacatccagacccacttcgagagccggatggacctgctgaagcagcggaaacgcaagcca
accgccgccgagagccgcaagaaggtccaggcgaccgagaccgcgacggaatcctccgag
aaatccaagtccaacggggaggacaggcctcggcagcagccccagtcctccgagcctcgg
aagtctccggcggggaagacgccgcctcccctccccatcggcgcgccggtcaccgccacc
atcgacgacgtgctgtctgcccgcccgggctcggtcacggaggaagtggtgcgcggcggc
gccgaggagcagaaagagaacggcaagtacctgttcagcatcaaccccgacctccagagc
cgacgcaacatcaagatcctggaggacgagcctcacagcaaggacgagacgccgctcagc
actctgtcggactggcaggactcgctagcgcgccgctgcatctgcgtttccaacatcgtg
cgcagcctctccttcgttcccgggaacgacctggagatgtccaaacacccgggcctgctg
ctgctgttgggccgcctggtgctgctccagcacaggcaccccgaacgcaaacaggccccg
gtcacctacgagaaggaggaagaggaggacgaaggcgtgagctgcgagagagacgagtgg
tggtgggactgcctcgaggtgctgcgggagaactgcctggtcactctggcgaacatctcg
ggccagctggacctttccatctatccggagagcatatgtctgccactgctggacggcctg
ctccactgggcggtctgcccctcagcagaggccctggaccccttccctacgctggggcac
cacagctcactttccccccagagactggtcctcgagaccctcagcaagctcagcatccag
gacaacaacgtcgacctcattctggcaacgccgccgttcagccgcttggagaagctgtac
ggcacgctggtgcgcttggtcggcgagcgcaaggtggccgtttgccgagagatggcggtc
gtcctgctggccaacctggcccagggtgacagcctagcggcgcgggccatcgctgtgcag
aaagccagcgtgggcaacctgctgggcttcctggaggacagtctagctgccacccagtac
cagcagagccagagctccttgctccagatgcagggaggacctcagtttgagcccaccagc
gtggacatgatgcggcgggcggcccgggccctgcacgccctggccaaggtggaggaaaac
cactcggagttcacgttgtacgagtcgcggttactggacatctcggtgtccccacttatg
aactctctggtgtcccaggtgatctgtgacgtactgtttctgattggccagtcatga
DBGET
integrated database retrieval system
