Perca flavescens (yellow perch): 114568122
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Entry
114568122 CDS
T07494
Symbol
vps50
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin
KO
K23288
syndetin
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114568122 (vps50)
Membrane trafficking [BR:
pflv04131
]
Protein recycling
Others
EARP complex
114568122 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
114568122
NCBI-ProteinID:
XP_028453320
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All DBs
Position
14:20589973..20701400
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AA seq
967 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPSELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQKRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSYYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETTSTAGE
VAAAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSHFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
SQLHEFKFMGQCRSPSVSPSKQVVSSTSPAQEELSLFQQYLQEGNPFEMQAERKEEETED
VLASNGYESDELEKSVYQDYDSDSDVAEELKQDYVDEQTGDVPLKSASRETIRSKKKSDY
NLNKTNAPILTNTTLNLIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMYESSGLGLISSRLRTTLNRIQESLIDMEAVGENAGVHGTAEDKKEKVPSPHLSQMVVL
TNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTTSELR
KPIYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKLLEEVSRHV
RIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPI
PDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctcttatggcccggcagggcctgaaaagtccacaggaaagcatg
gcagacctcagtcctgtggagaacctgagaatcccgagcaaggaggagttgcgggagcta
agggagcagcccatcgacccccaggctgagcaggagatcatcgacagcatcgaggaggtc
tacttctctaacgactccttcgacatggtgcagcacgaactggagaaactaccatctgag
ctgaacctgcaggagctggaggagtacagagacaagctgaaaagacaacaggcagcagtt
tctaaaaaggtcgccgatctcattctggagaaacagcccgcttatgtcaaggaactggag
cgagtgacagcgttacagaccaacctgcagctggcagcggttatttgcactaatgcaagg
aggcaactgagcgtggcaaaggagggattcacagaagccagtttgggtctgttagccaat
cagaagagacgacaactgctgacaggcctgcttaagtcactcaggaccatcaagacgctg
caaagaacagatgtaagactcagcgagatgctagaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcaaaaggctgccagcacctttaaacactacagctgcatcagt
gaattgaattccaaactacaagacactctggagcaaatagaggagcagcttgatgtcgcc
ctgtcaaagacttgtaagcactttgatgtttcctactacaccaaggtccagcttgcctac
acgctcctgggcaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacggtgttccaagtggtgctgggatatgtggagctatgtgccggaaacgct
gataccaaattccagaagatgcagtacaaggacctgtgcacgcatatcaccccggacagc
tacattccctgcctgacagatctatgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcacgaagagcacgacaaacaggagaccacttcaactgcaggtgaa
gtagcggcagcagagtctgatgagtcggtggtggaccgcagctatgtaaagaagaagcta
gagcatgggctgacacggatctggcaggacgtccagttgaaagtaaaggcctacatcctg
gggacagacatgtctcacttcaaatatgatgatttcatcgtggtacttgatgtcatcagc
aggttgatgcaggtgggtgaggagttctgcggcagtaagtcagaggtcctgcaggagtct
atcaaacgccagagtgtcaactactttaaaaactatcacagggcacgactggaagagctg
aggatgtttctggaaaatgagacatgggaactttgcccggttaagtctaacttcaacatc
tcccagctccatgagtttaaattcatgggccagtgtcgttctccgtccgtttccccgagc
aaacaggttgtgtcctcgaccagcccggctcaggaggagctttctttgttccagcagtac
cttcaagaaggaaacccctttgagatgcaggctgagcgcaaagaggaggagacagaggat
gtgctggcatctaatgggtacgagtcagatgagctggagaagagcgtgtatcaagattac
gacagcgacagtgatgtcgctgaggagctcaaacaggactacgttgatgagcagacgggt
gatgttccactcaagagtgcatcccgagagaccataagaagcaagaaaaagtctgactac
aacctcaataagaccaatgcaccgattctcaccaacaccaccctcaacctcattcggctt
gttgggaagtatatgcagatgatgaacattctgaagccgatcgccttcgatgtcatccac
tgtgtgtcacagctctttgactactacctgtatgctgtatacaccttctttggacgcaat
gacatgtatgagtcatcgggcctgggccttatcagcagcagactgagaactacactgaac
cggatccaggagagcctcattgacatggaggcagtgggggaaaatgctggagtccacggc
acagcagaggacaaaaaggagaaggtgcccagcccccatctcagtcaaatggtggtcctc
actaacagtgggactctttatgggctagcacagagggtggtggccactgagtctcttgtg
tttctggcggaacagtttgaatccctccagtcccacctggacacaatgatgcctgcagcc
aagaagcccttcctgcaacagttttattcccagacggtgtcaaccaccagtgaacttcgg
aaaccaatatactggattgttgcggccaaggccatcgactacgagcaaatgttgctccta
atggccggagtcaaatgggacattagggagataatgtcacagcataatgtatatgtggac
gtcctgttaaaggagtttgagcaattcaacaagctgctggaggaagtttccagacatgtg
cgcatcccgctgcctgtgtccaacgtcctgtgggagcactgcatccgcctagccaacagg
actctagtagaaggctatgctaatgtgaagaaatgcagcaacgagggccgggccctgatg
cagctggactttcaacagttccttatgaagctggagaagctgaccgacctgcgacccatc
cccgataaagagtttgttgagacctacatcaaggcctactacctgacggagaatgacatg
gagcagttcatcaagaaccacagggagtactccatgaagcagctagccaacttggtgaac
gtttgtctgggttcacatataaacaagaaggctcgtcagaaactcctggcggccatagat
gacattgacagacccaagagatag
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