Perca flavescens (yellow perch): 114568164
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Entry
114568164 CDS
T07494
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114568164 (trim71)
04121 Ubiquitin system [BR:
pflv04121
]
114568164 (trim71)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114568164 (trim71)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114568164 (trim71)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114568164 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
ANCHR-like_BBOX
SGL
TEN_NHL
zf-RING_5
zf-C3HC4
zf-RING_2
zf_RING_Vps8_fungal
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
114568164
NCBI-ProteinID:
XP_028453389
LinkDB
All DBs
Position
14:complement(24547283..24585725)
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AA seq
835 aa
AA seq
DB search
MLQMASFPDTDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTNRRLHVLPCLHA
FCRQCLEGQRSPGDPLKLRCPTCDQKVCISEAGVDSLPSSNFLFSNLLDVVVSSEEQIQN
KNGHHNHRGGLGGGSSGFHHPNHGGLLHPHHLGEPQCSSCDEENPATSHCLDCQEYLCDN
CVRAHQRVRLTKDHFIERLGENLHLGRINVNNKPSQPGVSVSLAQSLQNNFALLSLFQDH
MSFCQHHDNEVFLFFCESCSVPICRECSVGRHMGHTFIYLQDAVQDCRAITIQLLADAQQ
GRQAVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLKHKKALEERECELLWKVEKIRQVKA
KSLYLQVEKLHQSLTKLDSTIAAVSQVLDEGRHLDVLLARERMLTQIHELKALRSLLQAQ
EDDRFMFTPPDQALYIAIQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTMIGYDHDG
EPRLSGGDTVSAIVMSVPDGNLSAAEITDHQNGSYTVGYLPKTEGEHLVSVLVCNQHIQG
SPFKVIVKSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIF
KPCGAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEK
GTKNGQFNYPWDVAVNSAGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGV
AFNHEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADS
RNHRVQVFEPNGNFLCKFGTQGSSFGHMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagatggcttcgttcccagacacggacctgcagacctgcccgctctgcaaggag
ctgtgcggctcctctgctccaatttcttccagctcttctacctcttcatcttcctcacat
acctcatcctcctccagccagaccaacaggaggctccacgtcctgccctgcctccatgcc
ttctgcaggcagtgcctggagggccagcgcagtccaggggacccgctgaagctgcggtgc
cccacctgtgaccagaaggtgtgcatctctgaggctggagtggactccctgccttcctcc
aacttcctcttcagcaatctgctggacgtggtggtgagctctgaggagcagattcagaac
aagaatggccaccacaaccaccggggaggcttaggtggaggctcctctggcttccatcat
cctaatcatggaggcctgctgcatcctcaccacctgggagagcctcagtgcagttcctgc
gacgaggagaacccagccacctcccactgccttgactgccaggagtatctgtgtgacaac
tgtgtgcgggcacaccagagggtgcggctgaccaaggaccacttcatcgagcgcctggga
gagaacctccacctgggccgcatcaatgtcaacaacaagccgagccagccaggggtatcg
gtgtctctcgcccagtccttgcagaacaactttgccctgctgtccctcttccaggaccac
atgagcttctgccaacaccatgacaatgaggtgtttctgttcttctgtgaatcctgctcg
gtgcctatctgtagggagtgcagtgttggccgtcatatgggccacacctttatttatcta
caagatgctgtacaggactgcagggccatcaccatccagctgctggcagatgcacagcag
ggacgtcaggctgtgcagctaagcatggagaaggtccaggccatggcagagcaggtggag
atcaaagccaaggtggtgcagacggaagtgaaggcccttgtgctcaaacacaagaaagcg
ctggaggagagggagtgtgaactactgtggaaggtggagaaaatccgtcaggtgaaggct
aagtctctgtacctgcaggtggagaaactgcaccagagtctgaccaagttggacagcacc
atcgcggccgtcagccaggtgctggatgagggccgccaccttgatgtgctgctggccaga
gagcgaatgcttacccagatccatgaactcaaggctttgaggagcctgctgcaggcgcaa
gaggatgaccgcttcatgttcactcctccagaccaggccctgtacatagctatccagtca
atgggccttatcagcagtggagcctttgccccagtcaccaaagcccatggtgagggtctg
aaaagtgcgctacgtggcaagcctgcatccttcactatgattggatatgaccatgatggc
gagccacgtctttccggcggggacacggtgtctgcaatagtcatgtcagtcccagacggt
aacctgtctgcagcggagataacagaccaccagaatggctcctacaccgtcggctacctg
cctaaaactgagggggagcaccttgtgtcggtgttggtgtgtaaccagcacatccagggc
agccccttcaaggtgatcgtgaagtcagggaggagctatggctccctgggctcccaagtt
tcttccttcgggtgcgagggggagggagatggtcagctgtgtcgtccctggggcatcagc
gtggacaaggagggatacgtggtggtggccgatcgcagcaacaaccgcatacagatattc
aagccttgcggtgccttccaccataagtttggctctctcggttctcggcctggtcagttt
gatcgtccagcgggggttgcatgtgacagtcagagacgaatcattgtggctgataaagac
aatcaccgtgtgcaggtgtttacttttgaaggccagttcctgctgaagtttggggaaaag
ggtactaagaatgggcagtttaactatccctgggatgtggccgtcaactctgcgggtaag
atcctggtctcagacactaggaaccaccgtgtgcagctcttcgcccctgacggctctttc
ctcaacaagtatggctttgaaggggccctgtggaaacactttgactctcccagaggagtg
gcctttaatcacgaagaccacctggtggtaaccgacttcaacaaccacaggctccttgtc
atccgaccggactgccagtcagctcgttttctgggctctgagggcaccgggaacgggcag
tttctgcggccccagggcgtcgctgtggaccaggagaaccgaatcatcgtggccgactcc
cgcaaccacagagtccaagtgtttgagcccaatggaaacttcttatgcaaatttggcaca
caggggagtagctttggacacatggatcgcccctctggtgtggctgtgacgcctgacgga
gtcattgtggtggttgactttggaaataatcgcatcctcaagttctaa
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