Perca flavescens (yellow perch): 114568239
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Entry
114568239 CDS
T07494
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114568239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114568239
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114568239
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114568239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114568239
NCBI-ProteinID:
XP_028453512
LinkDB
All DBs
Position
14:complement(6976158..7017020)
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AA seq
962 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKNQKRIYCQLHNAANANQKEKYEADLKKEI
KKLQRLRDQIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQ
KVDPAQKEKEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKTF
IEKHRHHIRMLETILRMLDNDSIQVDAIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLE
EIPQALIATSPPGNSNLEDEIFQNSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRST
DSEVGQSPVKNGNPSSSLSSSSSSSSSSSSSSSCSSSSSIPSSSLTSSSLVSMATIAGGG
LGGSGGGNNSLHGSLGGLLSNTSAGSYSSATQQQPHPSAQQQQQQQQQQQQQQQQQQAKH
LAGPASSAPISIPNSSANSHLVSSAPSPPNAITQGLFTSSSQAQALSGPAQTSNSLGLSL
GLSLGKGGMSGCITTSPMSGSLGLSGMPASLSSMASLLSGSTPAPYAQAAASGAIGSGLP
GSLGGIGISPATTHSAAGSIGSGSITVGGPTSSTGGLLGPAPGLTNVGSGMLGLGSGQSG
MQGSSLVSLSPVGGLAPGSGVGVIGSNGGSSGSAGSGVVGGNLSLSVRPPSQQKQNGSTS
YSAVVADSTTDSALTSASQSQSSQPSSLTSAANQPKDTGSSLLGSICMSSSSPSPAFYSE
AKAVSGGSLLNGPLSYSQSSDSLKPQEPLSSLKSMAERAALSSGMEGDVSSLHLTPDIFP
SSTTAPSGPPSAPQLSLSEVSIPPSLGVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDS
ERIRQYLMRNPCPTLPFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKAL
KKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRD
LQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggggaaatagatcgatgtctgaaaaaagtagcggaa
ggagtcgaacagtttgaagacatctggcaaaagaatcagaaaaggatttattgccaactt
cacaatgcagccaacgccaaccagaaagagaaatatgaagcggacctcaagaaagagatt
aaaaagctacagcgtcttcgagaccagatcaagacgtgggtggcatccaacgagatcaaa
gacaaaaggcagctagtagagaaccgcaaactcatagaaacgcaaatggagcggttcaaa
atagtggagcgagagaccaagacgaaggcgtactcaaaagaaggtctgggcctggcccaa
aaggtggacccggcccagaaagagaaggaggaggtcggcacgtggctaacgaacaccatc
gacacgttgaacatgcaggtggaccagtttgagagcgaggtggagtccctttcagtgcag
acgaggaaaaagaaaggagacaaagagaagcaggaccggattgaggagctgaagacattc
atcgaaaagcatcggcaccacatccggatgctggagaccatcctgaggatgctggacaac
gactccatacaggtggacgccatcaggaagatcaaggacgatgtggagtattatctggac
tcgtcgcaggatccagactttgaggagaatgagtttctgtacgacgacctggacctggaa
gaaatccctcaggcgctgatcgccacctccccgccgggaaactccaacttggaggacgag
atcttccagaactccagcagcacacccacctccaccacctcatcttcacccatcccccct
tcacctgccacttgcactacggagaactcagaagatgacaagaagaggggacgttcaaca
gacagtgaagtcggtcagtcacctgtgaagaacggaaacccctcgtcctcgctctcctcc
tcctcctcctcctcgtcttcctcctcctcatcctcctcctgctcttcctcttcctccatc
ccttcctccagcctgacctcgtcctccctcgtctccatggcgaccatcgcggggggagga
ctcggcggctccgggggcggcaacaacagtcttcacggcagcttgggcggtctgctctcc
aacacctcggccggcagctacagcagcgccacccagcagcagccgcacccgtcggcgcag
caacaacaacaacaacaacaacaacaacaacaacaacagcaacagcagcaggccaaacac
ttagctggccccgcctcctcggctcctatctccatccccaactcctccgccaacagccac
ctggtgtcctccgccccttccccccccaacgccatcacccaggggctcttcacgtccagc
tcccaggcgcaggccctgtcggggcccgcgcagacctccaacagcctgggcctcagcctc
ggcctgtcgctggggaagggcggcatgtccggctgcatcaccaccagccccatgtccggg
agcctcggcctgtcagggatgccggcgtccctgagcagcatggcgagcctcctgtcgggc
tccaccccggcgccctacgcccaggcggccgcgtcgggagcgatcggctcgggcctcccg
ggctccctgggcggcatcggcatcagccccgcgacgacccacagcgcggcgggctccatc
ggcagcgggagcatcacggtcggcgggccgacgtcctcgacgggaggcctgctgggcccg
gcgccggggctgaccaacgtcggctccggcatgctgggtttgggttccggtcagtcgggg
atgcagggctcctccctggtgtctctgagcccagtcggaggcttggcgccgggtagcgga
gtgggggtcatcgggagcaacggaggcagctctgggtcagcggggagcggagtggtggga
gggaacttgtcgctctccgtcaggccgccgagccaacagaagcagaacggtagcaccagt
tacagcgctgtggtagcagacagcacaacagactccgccctcaccagtgccagccaatca
caaagcagccaaccctcatctttgacctccgcagccaatcagcctaaggacactggttcc
agtttactgggctccatttgtatgtcgtccagctccccatcgccggccttctacagcgag
gcgaaagcggtgagcggcggcagcctgctgaacgggccgctgtcctactcgcagtcctcg
gacagcctgaagccccaggagcctctgagcagcctgaagtccatggccgagcgagctgca
ctcagctcagggatggagggtgacgtgtcctccctgcacctcaccccagacatcttcccc
agcagcactacggccccctcgggcccgccgtcggcacctcagctgtcgctgtcggaggtc
agcatccccccgtcactgggcgtctgcccgctggggccggttcccctgtccaaagaccag
ctctaccaacaggccatggaagaggcggcgtggacgcacatgccccacccgtccgactcc
gagaggatcaggcagtacctgatgaggaacccgtgccccaccctgcctttccaccaccag
gtgccaccgccccactccgacactgtagagttttaccagaggctttccaccgaaaccctc
ttcttcatcttttactacctggagggcacaaaggcccagtatctggcagccaaagccctg
aagaagcagtcctggaggttccacacaaagtacatgatgtggtttcaaaggcacgaagaa
cccaagaccatcacggatgagtttgagcagggaacatacatttactttgactatgagaaa
tggggccagcggaagaaggaaggcttcacgtttgagtaccggtacctagaagaccgagac
ctccagtga
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