KEGG   Perca flavescens (yellow perch): 114568288
Entry
114568288         CDS       T07494                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114568288 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pflv03019]
    114568288 (exosc7)
Messenger RNA biogenesis [BR:pflv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114568288 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     114568288 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 114568288
NCBI-ProteinID: XP_028453617
LinkDB
Position
14:complement(13285282..13288341)
AA seq 291 aa
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTAVLV
GVKADIGKPRPMVPNEGYFEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSVD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHISADEEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCTR
KVGGGSLDPESIFEMTEAGKRVGKNLHAPLMKLLQQEESLGKTRQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcaacagtacaagttagcgaggctgaaaaagtttacatcttacacggtatacgggat
gatttacgagtggacgggagaggttgtgaggactacagacacatggaaatagagactgat
gtggtgtccaacacagacggatctgccaaagtcacactggggcacacagcggttctagtt
ggggttaaggctgacattggaaaaccaaggcccatggtgcccaatgaaggctactttgag
ttctttgttgactgttcggccaatgcaacccctgagtttgagggcagaggaggcgaggag
ctggggacggagctgagtaacactctctacaaagtcttcaacaataaacacagtgtggac
ctgaagagcctttgcatcagcgcaggagaacattgctgggtcctctatgtggatgtactg
ctcctgcagtgtgatggaaacctgtacgatgccatctcagtcgctatcaaggcagctctc
ttcaacacaaaaattcccagagtgcacatatcagctgatgaagaaggagggaaggaaatt
gagctgtcagatgacccgtatgattgcatgagactcaatgtagaaaacgttccttgcatt
gtgacattgtgcaaggtgggccacaggcacgtagtggacgcgactctgcaggagaaggcc
tgctccgtggcgagtctgatcatctctgtcacacacaagggcacggtcacctgcacaagg
aaggtgggcggaggcagcttggatccagagagtatctttgaaatgacagaggcaggtaaa
cgggtcgggaagaaccttcacgctccgctcatgaagctgctgcagcaggaggagagtttg
ggaaagacgcgacagaaagttggcttccttggttaa

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