Perca flavescens (yellow perch): 114568666
Help
Entry
114568666 CDS
T07494
Name
(RefSeq) collagen alpha-3(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04510
Focal adhesion
pflv04512
ECM-receptor interaction
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114568666
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114568666
09142 Cell motility
04820 Cytoskeleton in muscle cells
114568666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pflv00535
]
114568666
Proteoglycans [BR:
pflv00535
]
Extracellular matrix (ECM) proteoglycans
Others
114568666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
114568666
NCBI-ProteinID:
XP_028454076
LinkDB
All DBs
Position
14:complement(27500488..27540477)
Genome browser
AA seq
949 aa
AA seq
DB search
MAFPNSGLKRKQPWHLSMSVCSPVCVALLSLLLAPALGQLDLNRLDGDTVCPPMRSSQDD
LPGFDLITQFQLDVIPLKGVRKVDGSTALQVAYRLDREANFQIPTMLNFPRGFPDEYSFM
VTFRMIKNTVNKVWNVWQIVDEDGYKQAGLRLNGDQLALEYFLMGADGNLQTVTFPGLSV
LFNAKWHKVMIGVERDQVTLYVDCQPVDQRPIKGKGPINTEGDTLIGRLDADPDASVVFE
LQWMLIHCDPKRAQRESCNELPATEMYANAEPDKSVQGPPGAPGPEGPRGPAGENGRDGR
DGLPGSTGSPGNPGSKGEKGEIGLPGQRGLPGLPGASGSSGPMGPIGPIGERGLPGFPGP
PGPAGPASEGPAGPPGKPGIPGDEGNIGPEGQPGPRGKPGTAGPAGPPGPPGPAGPPGAS
NEGSGEACPAACPAGPQGLAGLPGMKGHTGLPGEPGKDGEPGAKGDAGEEGPQGPPGRMG
DDGQRGPIGFPGSTGEKGDRGPPGFNGVPGPTGPPGAPGVEGIRGRQGLEGAKGDEGAVG
PQGEQGPAGGKGDVGEPGKDGLDGLPGVDGAKGEPGTAGASGVRGIVGIPGLPGKQGVVG
PSGAKGDAGDEGPVGPVGLPGKTGEPGKDGEDGKTGSKGSTGETGKQGPVGPAGPPGIQG
DKGDKGSTGATGLKGHTGHKGDQGPMGPMGPKGSLGDTGIAGDPGVKGDQGPPGVTGVKG
ERGEKGQRGATGDEGRPGQPGHSGLSGPMGARGLEGEPGIPGSPGPRGLPGPKVNDEKLR
EMCSAVVEEQLAEFMKEFLKRPAAIGSPGTPGPSGPPGPPGPAGAAGTAGTPGPAGAKGH
PGFFGLPGLPGKKGDAGEKGDKGDKGVDGVGIKGSPGEPGAPGAPGAPGIGKDGKNGERG
ETGSPGVPGAAGPKGTSGPPGLCDPSTCIGRLPPFYMVSGKKSAGYKNP
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcctttcccaactctggtttgaagagaaagcaaccgtggcatctatcaatgtcggtg
tgctcccccgtctgtgtggctctcctgtccctcctcctcgccccggcacttggacaacta
gacctcaaccgactggatggcgatacagtctgcccaccaatgagaagtagccaagatgac
cttccaggttttgatctgatcacccagttccagctggatgtgatccctctgaaaggtgtg
aggaaggtggacggctccactgccctgcaggtggcctaccgccttgacagggaggccaac
ttccaaattccaaccatgctaaactttcctcgcggcttccccgacgagtactccttcatg
gtgactttccgcatgattaagaacacggtgaacaaggtgtggaacgtctggcaaatagtg
gacgaagacggctacaaacaagccggactgaggctgaatggcgaccagctggctctggag
tacttcctgatgggcgccgacggcaacctgcagaccgtaaccttccccggcctttctgtg
ctcttcaacgccaagtggcacaaagtgatgattggcgtagagcgcgaccaggtcactctg
tacgtggactgccagcctgtggatcagagacccatcaaaggcaaaggccccatcaacaca
gagggagacactctcattggcaggctggatgctgatcccgatgcctccgtagtgtttgaa
ctccagtggatgctgattcactgtgacccaaagagggcccagcgggagagctgcaacgag
ctgcctgccaccgagatgtatgccaatgctgagcctgacaaatcagtccaagggccccca
ggagcccctggcccagagggcccccgagggcccgcaggagaaaacggcagagatggaaga
gatggtcttccaggttctactggcagtccaggcaatcctggcagcaaaggggagaagggg
gagatcggtcttcctggacagagaggcctgccgggccttccaggagctagtggttcttct
ggtccaatgggtcccatagggccgataggggagagaggacttcctggctttccaggacct
ccaggtcccgctggcccagcaagtgaaggccccgctggaccaccagggaaaccaggaatc
ccaggagatgagggaaacatcgggccggagggtcaacctggacccagagggaaacccggc
accgcagggcctgctggccctcctggtccaccagggccggcgggaccgcctggtgccagc
aatgagggaagcggggaagcttgtcctgctgcctgccctgcaggcccacagggactggct
gggctaccagggatgaagggacacacaggtttgcctggtgagcccggaaaagatggggaa
cctggagcaaagggagatgctggagaggaaggtcctcaggggccaccaggtcgcatggga
gatgatgggcaaagagggcccattggattccctggaagcacgggggaaaagggagacaga
ggtcctcctggtttcaatggcgtcccaggacctaccggcccacctggagctcctggtgtg
gagggaatccgtggacgtcagggtttggagggtgccaagggcgacgagggagctgtagga
cctcaaggagaacagggtcctgcagggggaaagggggacgttggagagcctggtaaggac
ggcttggatggacttcctggagttgatggagccaagggagagcctggtactgctggagct
agtggtgtcagggggattgtgggtattccagggctgccagggaagcagggagtagttgga
ccctctggtgcaaagggtgacgctggtgatgagggacccgtcgggccagttggacttcct
ggaaagactggggagcctggaaaagatggagaagatgggaaaacaggaagtaaaggatca
accggtgaaacaggaaaacaagggccagttgggcctgcaggccctccaggcatccagggt
gacaaaggagataaaggtagcaccggtgccacaggactgaagggtcatactggacacaaa
ggtgatcagggacctatgggaccaatggggccaaaaggaagtttgggggacacaggtata
gcaggagatcctggggtcaagggagaccagggccctcctggtgttactggagtcaaagga
gagcgtggagagaaaggccaacgaggagctacaggagacgagggcagaccaggccagcca
ggccactccggtttgtctggtccaatgggagctcgagggctggaaggagaaccaggcatt
cctggatcaccaggccccagaggtcttcctggcccaaaagtgaatgacgagaagcttcgg
gaaatgtgctcagctgttgttgaagaacaattagcagagtttatgaaagagtttctgaag
aggccggcagccattggttcccctggtactcctggaccgtcaggacctcccggcccccct
ggaccagctggagcggcaggaacagcagggactccaggtccggcaggtgccaaaggccat
ccaggcttctttgggcttccgggcttaccgggcaagaaaggtgatgctggggagaaggga
gacaagggagacaagggagtggatggtgtaggaatcaaaggaagcccaggcgaaccaggt
gcaccaggtgcaccaggcgctcctggcatcggcaaggatggcaagaatggagaacgcggt
gagacaggaagtcctggtgtcccaggagcagccggtccaaagggaacttcaggtccgccc
gggctttgtgatccatcaacctgtataggcagacttccacctttctacatggtcagtgga
aagaagtccgccggctacaaaaacccatga
DBGET
integrated database retrieval system