Perca flavescens (yellow perch): 114568716
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Entry
114568716 CDS
T07494
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pflv00535
]
114568716
Proteoglycans [BR:
pflv00535
]
Extracellular matrix (ECM) proteoglycans
Others
114568716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
114568716
NCBI-ProteinID:
XP_028454161
LinkDB
All DBs
Position
14:complement(370332..688289)
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AA seq
1858 aa
AA seq
DB search
MQFSVRLSLCVLGFVLIPLFPQPARGQVSTPRRFRAKVLSPTKLHVSWKEPKGQFESYKV
IYTTRPGGEQKEIQVSKQEAKLLIQDFDPSKEYNFKIIAVSGGQQSKPLQAKHEAQSGVE
MVESQRGRDSGVAEENNEISEAEEKFTCKTSSVSDIVVLVDGSWSIGRINFRLVRTFLEN
LVKAFSVGSDQTRIGLAQYSGDPRIEWHLNAHTTKEAVMEAVKNLPYKGGNTLTGLALTF
ILENSFKPESGSRPGVPKIGILITDGKSQDDVIPPARSLREAGIELFAIGVKNADENELK
AIASPPEETHVYNVADFSVMSDIVDGLTKTVCERVEQLDKQLRGEGQPARPPTAVAPPRD
LVTSEVTARSFRVRWTHAPGQVEKYRVVYYPASGGKPEEKVLQGTENSVELNYLNSLTEY
QVAVFAVYHSSASEALRGSATTLALPMVNDLELFDITHSTMRVRWKIAAGASGYMILYAP
LTEGDPADEKEVKVEDSVNEVELEGLTPATEYTVTVYALYGEEASDPMTSQQTTLPLTPA
RNLRFSDVDHSSARLTWDSASRKAKGYRIMYVKTNGVQTNEVDVGLVTTWLLKNLTSLTE
YTVGVFAIYDEGQAEATTDSFTTKTVPDPPDLKSSDISTDSFRVSWQHPASDVVMYRLTW
TPTDGGDSEEVLVNGNINTYLIKGLSPVTEYEVLLAAIYVNEVESDEVVLVESTVKTTTA
VPTTTVTTTAPRIGVRNMRIDEETTFSMRVAWQPGDSRNVRHYRLSYISAKGDRAEEQRT
VPTGQNSLILQPLLSDTEYKVAVTPVYPDGDGPTAARMGRTLPLSAPRNLRLSEEWYNRF
RISWDAPPSPTMGYRVVYQPLSAPGPALETFVGEDVNTMLIVNLLSGTEYSVKVIASYTT
GSSEALSGRAKTLYLGVTNLSAYQVRMNSFCAQWQPHRHANAYRVTIESLLNGQRQETKL
SGGANRHCFNNLKANTQYKMSVYAQLPDGSEGPAVTVTEKTLPIPTPAPTTPPTTTPLPT
IPPAKEVCKAAKADLVFLVDGSWSIGDDNFLKIIRFLYSTSGALDRIGPDGTQVAIAQFS
DDARTEFKLNSYGDKERLLDAINKISYKGGNTKTGRAIQHVKENIFTAEGGMRRGIPNVL
VVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDAF
TKIEEKLVTFVCEAATATCPSVPMSGSTTPGFRMMELFGLVENRYGSVSGVSMVPGTFNT
FPCFHLHSNALMAQPTRFIHPEGLPSDYTITLLFRLLPDTPEEPFALWEILNKNNEPLVG
VILDNGGKTLTFFNNDYKGEFQTVTFEGPEIQKLFYGSFHKLHIAISKTSAKVVIDCKMV
AEKTINAAGNITIDGTEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWASRDKCCELPGL
RKEADCPAMPKACTCTQDSKGPPGPAGPPGGPGIRGARGDRGEPGPVGPTGPVGDTGVPG
PQGPQGPQGPSGRSIIGPPGAPGERGQKGEAGQQGTQGIAGRAGPPGREGPAGIRGLPGK
DGPPGRQGASGTMGTPGAPGGPGHTGPSGKQGELGPPGPPGSKGEKGERGDLQSTASVQD
IARQVCEQLIQSHMARYNAILNHVPSPPVSIRTVPGPPGEPGRQGSPGPQGEQGPTGRPG
FPGQNGQNGQPGERGQPGEKGEKGSQGVGVQGPRGPPGPPGAQGQGRPGSQGPSGRPGNP
GTPGRPGVPGPVGSTGPPGYCDQNSCVGYNVGEGEDDTDRGAVPAVQLPPNVFQNYGEVE
EDDPYRYYEPSYPAPRPVAPDDPALAHRSSRSLNGEEERVAPKRRLKREAKALPGLFK
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcagtcagactgagcctttgcgtgctgggctttgtcctcatccctctgttc
cctcagccagcacggggtcaagtttcaacgccacggagatttcgtgccaaagtcctgagc
cccaccaagctgcacgtgtcgtggaaagagccgaaaggacagtttgaaagctacaaagtc
atttacaccacacggccaggtggagagcagaaggagattcaggtgtcgaagcaggaagca
aagctgctcatccaagactttgacccctccaaagaatacaactttaagatcattgctgtc
agtggaggacagcagagcaaacctctccaggccaaacatgaagctcaatcaggcgtcgag
atggtcgagtctcagaggggacgagacagcggcgtcgccgaggaaaacaacgagatctca
gaagctgaagagaagtttacgtgtaagacttcgtccgtatccgacattgtagttctggtg
gacggctcctggagcatcgggcgcatcaacttcaggctggtccggaccttcctggagaac
ctggtcaaggccttctctgtcggctccgaccaaaccaggatcggcctggctcagtacagc
ggagacccccgcattgagtggcatctcaacgctcacaccaccaaagaggctgtgatggag
gctgtgaagaacctgccgtataaaggaggaaacacactgacgggtctggctctgaccttc
atcctggagaacagcttcaaacccgagtctggatccaggcctggcgttcccaagatagga
atcctcatcactgacgggaagtcccaggacgatgtgatacccccagcgcggagcctgagg
gaggctgggatagagctgtttgccatcggtgtgaagaacgccgatgagaacgagctgaag
gccatcgcctctcctcccgaggagacccacgtctacaacgtggccgacttcagcgtgatg
agcgacatcgtggacggcctcaccaagaccgtgtgtgagcgcgtggagcagctcgacaag
cagctccgcggggaaggacaacctgcccgcccgcccacggctgtggcgccgccgcgcgac
ctggtgacctctgaggtcacggctcggagtttccgggtgaggtggacccacgcgccgggc
caggtggagaaataccgcgtagtctactacccagccagcggagggaagccggaggaaaag
gtgctccaggggacggagaacagcgtggagctcaactacctcaactctctgacggagtac
caggtggccgttttcgccgtctatcatagctccgccagcgaggctctgcgaggaagcgct
accacgctggccctgccgatggtgaacgacctggagttgtttgatatcacgcacagcacc
atgagggtccgctggaagatcgccgccggggcatctgggtacatgatcctgtacgcccct
ctgacggagggagaccctgcagatgagaaggaggtgaaggtggaggactctgtaaatgag
gtggagctcgagggattgactccggccacagagtacacagtgacggtttacgccttgtac
ggagaggaggccagcgaccccatgaccagccagcagaccacattaccgctgaccccggcg
aggaacctgcgtttctcagacgtggaccacagctccgcccggctcacatgggactctgcc
tccaggaaggccaaaggctaccgcatcatgtacgtcaagaccaatggagtccagaccaat
gaggtggatgtcggccttgtgacaacctggttgctaaaaaacctgacctcgctgacggag
tacacagtcggggtctttgccatctacgatgagggccaagctgaggccacgactgacagc
ttcaccacaaaaacagtccccgatccgccagatctgaagagcagtgacatctccacagac
agcttcagggtgtcatggcagcacccagcctctgatgtggtgatgtaccgactcacctgg
acgcccactgatggaggggacagcgaagaggttctggtgaacggaaacattaacacctac
ctgataaaaggactgagccccgtcacggagtacgaagtcctcctcgccgccatctacgtg
aacgaggtcgagagcgacgaggtggtcctcgtagagtccaccgtaaaaacaacgacggcg
gtgcccacgacgacagtcaccacaacagctcctcgtatcggggtgaggaacatgaggatc
gacgaggaaaccaccttcagtatgcgggtggcctggcagcccggcgactcgaggaacgtc
cgacattatcggctgagctacatcagcgccaagggagaccgggcagaggagcagaggacg
gtgcccaccgggcagaacagtctgattctgcagccgctgctgtcggatacggagtacaaa
gtcgccgtcacgcccgtttaccccgacggagacgggcccacagcggcgcggatgggacgg
acgcttcctctgtcagctcccaggaacctgcggctatcggaggaatggtacaaccgcttc
aggatcagctgggatgctccaccatcgcccaccatgggctacagggtcgtctaccagccc
ctatctgctcctggtcccgctctggagaccttcgtgggggaggacgtgaacaccatgctg
atcgtcaacctgctcagcgggacggagtacagcgtcaaagtcatcgcctcctacaccacc
ggatccagcgaggccctttcagggagagccaagaccttgtatctgggggtgactaacctg
agtgcgtaccaggtgaggatgaacagtttctgcgcccagtggcagcctcaccgacacgcc
aacgcctaccgagtgaccatcgagtctctgctcaatggccagaggcaggagacgaagctg
agcggaggggcgaaccgccactgtttcaacaacctgaaggccaacacgcagtacaagatg
agcgtgtacgctcagctgccggacgggagcgaagggccggcagtcaccgtcacggagaag
actctacccatcccgacgccggcaccgaccacgccccccaccaccacgccgctacccacg
atcccccctgccaaggaagtctgtaaagcagccaaagccgacctggtcttcctggtggac
ggttcctggagtatcggcgatgacaacttcctgaagatcatccgcttcctgtacagcacc
agcggagctctggaccggatcggcccggatggcacacaggtggccatcgcacagttcagc
gacgacgcccggaccgagttcaagctgaactcgtacggcgacaaggagcgtctgctggac
gccatcaacaagatctcctacaagggggggaacaccaagacgggtcgagccatccagcac
gtgaaggaaaacatcttcacggcagaggggggcatgaggcggggcatccccaatgtcctc
gtggtcctcaccgacggccgctctcaggacgacgtcaacaaggtctccaaggagatgcag
atggaaggctacattgtgtttgcgatcggcttcgccgatgcggactacggcgagctggtg
agcatcgccagcaaacccagcgaccgacacgtcttcttcgtggacgacctggacgccttc
accaagatcgaagagaagctggtgaccttcgtgtgcgaggcggccactgccacgtgtccg
tccgtgccgatgagcggcagcacgacaccaggtttccgtatgatggagctgtttgggctg
gtggagaaccgctacggcagcgtctccggtgtttccatggtacccggcaccttcaacacc
ttcccctgtttccacctgcacagcaacgctttaatggcacagccgaccaggttcatccac
cctgaagggctgccgtctgactacaccatcacgctgctgttccgactgctgcccgacacg
ccagaggagcccttcgccctctgggagatcctcaacaagaacaacgagcctctggtggga
gtcatcctggacaacggagggaagactctgacgttcttcaacaacgactacaaaggagag
ttccagacggtcactttcgaaggaccggaaatccaaaaactcttctacggcagcttccat
aagcttcacatcgcaatcagcaagacgagcgccaaggtggtgatcgactgcaagatggtg
gccgagaaaaccatcaacgcagcgggaaacatcaccatcgacgggacggaagttctgggc
cggatggtccgctccagagggaacaaggataactctgcaccgttccagcttcagatcttc
gacatcgtctgcagcacttcgtgggccagcagagacaagtgctgcgaacttcctggtctg
aggaaggaggcagactgcccagccatgcccaaagcctgcacctgcacccaggacagcaaa
ggcccccccggccctgctggaccacctggaggcccagggatcagaggagccagaggtgat
cgtggcgagccaggcccagtggggccaactggtccagtaggtgatacaggtgtacccggg
cctcagggaccccaaggaccacaaggacccagtggacgctccatcataggacccccaggt
gctccaggagagagaggacagaaaggtgaagctggacaacaaggaacacagggaatcgct
ggccgagccggacctccaggcagagaaggcccggcaggaatcagagggctgccaggtaaa
gacggcccaccgggcagacagggcgcctcaggaaccatggggacgccaggagcccccggg
ggccccggtcacacgggcccttcaggaaaacagggagaactgggaccaccgggtcctcct
ggaagcaaaggggagaaaggagaacggggcgacctgcagtcgacagcatcagtccaggac
atcgccaggcaggtgtgtgagcagctcattcagagccacatggcgcgctacaatgccatc
ctgaaccacgtgcccagtccgccggtgtccatccgcaccgtgccgggaccccccggagag
cccggcagacaggggtctccagggccccagggagaacagggacccacgggaagacccggc
ttcccgggacagaacggacagaacgggcagccgggagaaagaggtcaaccaggagaaaag
ggtgagaaaggatctcaaggtgttggagtccagggccccagaggacctccaggacccccc
ggagcccaaggccagggcagacctggcagccagggtccctcagggcggcctggaaatccc
gggacccctggtcgtcccggggtccctggacccgtcggctccactgggcccccgggctac
tgcgaccagaactcctgtgtgggctacaatgttggagagggtgaagatgacactgaccgc
ggcgctgtccccgcagtccaactgccgcccaacgtcttccagaactacggcgaggtcgag
gaggacgatccctaccgctactacgagcccagttacccggcaccgaggcccgtggcgccc
gatgacccggcactcgcccaccgcagctcccggagcctgaacggcgaggaggagagagtc
gcgccaaagaggagactaaaacgggaagccaaggcgctgcccggactatttaaatga
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