Perca flavescens (yellow perch): 114568830
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Entry
114568830 CDS
T07494
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03250
Viral life cycle - HIV-1
pflv03272
Virion - Hepatitis viruses
pflv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114568830 (pdcd6ip)
03272 Virion - Hepatitis viruses
114568830 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114568830 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114568830 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114568830 (pdcd6ip)
Membrane trafficking [BR:
pflv04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
114568830 (pdcd6ip)
Exosome [BR:
pflv04147
]
Exosomal proteins
Proteins found in most exosomes
114568830 (pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
Snapin_Pallidin
AAT
Csm2_III-A
COG3_N
Motif
Other DBs
NCBI-GeneID:
114568830
NCBI-ProteinID:
XP_028454269
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All DBs
Position
14:19108954..19125391
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AA seq
888 aa
AA seq
DB search
MATFISVPLKKSSEVDLTKPLSKFVTATYPAGEEQGEYIRAVEELNKLRRNALGRPLDKH
ESCLEILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIASEQNLDNDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMKDAVIAKLANQAADFYGDAFKQCQYKDNLPKYF
YFQEVLPVLAAKHCIMQANAELHQSILAKQKKRFGEEIARLQHAAELVKTVASRYDEYVS
VKDLSEKINRALTAAKKDNDFIYHDRVPEVKDLEHIGKATLVKATAITPPLSQKFTDLFE
KMVPTAVQQSMSIYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAGKARAVVQLGGLQSIEQLIKDLPELLTRNREILDESLKMLDNEETTDNELRTKFNQRW
NRTPSGDLYKPLRAEGTNFSNVLDKAVQADQVVRDRYNTHCEMITLLCKPENELNAAIPS
ANPTKTLQGSEVVNVLRSQLVQLDEMKKERETLEGEIKAVTFDMSTTFLTALAQDGAINE
EQLSLSQLDQLYGAYNQRVQATIRTQEELLGQVQTSHQEFSSLKQSNTEANQREEVLKKL
ASAHDSYVEISNNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFNIPAYQSTPAAPAGGPTPAPRTVFTQQPQHAQQEPQAKPMPPARPPPPSFTPQA
ASTIPTNAPATGPPSSNPPPLAPPSQAQGPPYPSYQGYPGYFQMPMGYNPYAYGQYNMPN
MPNMPNMPYMQYQQTPGQGGYPAAPPAGQPYPGYPQQPPQQQPYYPQQ
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttcagtcccgttaaaaaagtcctctgaggtggatctgacgaaaccg
ctatcgaaatttgtaaccgccacatacccagcgggcgaggagcagggggagtatatccgt
gccgtggaggagttgaacaagctccgcaggaacgcgctgggaaggccgctggacaaacat
gagagctgcctggagattctgctcagatactatgaccaactgtgtgctgttgagcccaag
tttcctttctctgaaaaccagctctgcttaaccttcacatggaaggatgcctttgataaa
ggatctctgtttggaggctcagtcaagctcgctttggccagtttgggctacgagaagaca
tgtgtgttgttcaacgcagcagcactggcaagtcagatcgcctcagagcagaacctggat
aacgatgagggactgaaggctgctgccaagtactatcagctggccagcggagcgtttggc
cacatcaaggacacagtgctgtcagcgctaaacagggagcccaccatggacatctcccct
gagactgttggtaccctgagcctcatcatgctggcccaggcccaggaggtcttcttcctc
aaagccacctcagataagatgaaagatgctgtaatcgccaagctggccaatcaggcagca
gatttctacggcgacgccttcaagcagtgccagtacaaagacaaccttcccaagtatttt
tattttcaggaagtgctgccggtgctggcggccaaacactgcatcatgcaagccaacgct
gagctgcatcagagcatcctggccaagcagaagaagcgttttggagaggagatcgctcgc
ctgcagcacgcagcagagttggtgaagacggtggcgtctcgttacgacgaatatgtgagc
gttaaggacctgagtgagaagatcaaccgagcactcaccgcagccaaaaaagataatgac
tttatctaccatgaccgcgtgcctgaggtcaaggatttggaacacatcggcaaggcaacg
ctggtcaaagccaccgccatcacacctccactcagccagaaattcacagacttgtttgag
aagatggtccccacggcggtgcagcagtccatgagcatttacagccagaggaaggctgag
actgtgaacagactggtgggaacgatgagggaggccaccaatctctgcaatggggtcttg
gcttccctaaacctgccggctgctctggaggacctctcaggagactctatcccacaatcc
attgctgggaaggcccgagccgttgtgcagctggggggactgcagagcatcgagcagctg
atcaaagacctgcctgagcttctgacccgcaacagagagatcctggacgagtctctgaag
atgctggacaatgaagagacgaccgacaacgagctgagaactaagttcaaccagcgctgg
aacagaaccccctctggagacctctacaagccccttcgtgcagagggaactaacttcagc
aatgtcttggacaaggccgtacaggcagaccaggtggtgagggatcgctacaacacccac
tgtgagatgatcaccctgctgtgtaaaccagagaacgagctcaatgctgccatcccctcc
gccaacccgactaagacactgcagggcagcgaggtagtgaacgtgctgcgctcccagctt
gtccagctggatgaaatgaagaaggagagggagaccctagagggagagatcaaggctgtg
acctttgacatgtcgaccaccttcctgacggcgcttgcccaggacggggccatcaatgag
gagcagctgtccctctcccagctcgaccagttgtacggcgcctacaaccagagggtacag
gccaccatccgcacgcaggaggagctgctgggacaagttcagacctcccaccaggagttt
agcagtctgaagcagtctaacacggaggccaaccagagggaggaggtcctgaagaagctg
gcttcggcccatgacagctacgttgagatcagcaacaacctgcgcgaaggcaccaagttc
tacaacgacttgacagaaatcctgcttaagttccagaacaaatgcagcgacatcgttttc
gctcgcaagacagagcgggatgagctacttaaggacctgcagcagagcatcgcccgagag
cccagtgctccatccttcaacatccctgcctatcagagcaccccagctgcccccgctggt
ggcccaacccctgcccccaggaccgtctttacccagcagcctcaacatgcccagcaggag
cctcaggcgaaacccatgcccccagccaggcctcctccaccgagcttcacccctcaggca
gcctccaccattcccaccaatgcaccggccactggccctcccagcagcaacccaccacct
ttggccccaccatcccaggcccagggaccaccttaccccagctatcaaggctacccaggg
tacttccagatgcctatgggctacaatccttatgcttatggccagtacaacatgcccaac
atgcccaacatgcccaacatgccctacatgcaataccagcagactccaggacagggaggc
tacccagcagcccctcctgccggacagccctaccctggctacccccagcaaccccctcag
cagcagccctactaccctcagcaataa
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