Perca flavescens (yellow perch): 114568963
Help
Entry
114568963 CDS
T07494
Symbol
smarca4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114568963 (smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114568963 (smarca4)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114568963 (smarca4)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114568963 (smarca4)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
114568963 (smarca4)
Chromatin remodeling factors
BAF complex
114568963 (smarca4)
PBAF complex
114568963 (smarca4)
GBAF(ncBAF) complex
114568963 (smarca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
114568963
NCBI-ProteinID:
XP_028454462
LinkDB
All DBs
Position
15:2638089..2677280
Genome browser
AA seq
1648 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYAQMKGMSMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMIPGGPSGPGAGPMEGSGDPNQGMGQPNRGGPQGPGG
PGGAGGGPGGAGGPAPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQQ
QPMPNMPPSTGPGGGPVGGPVGGPGPAQANYNRPHGMVGPNMAPPGPAGVPPGMQGPPTN
GPPKSWPEGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQ
PPPMMLHQKQNRVTPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTK
ATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQ
QKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKEN
ERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKE
KKKKKKKKKPETMEGGAPTLGPDGEPLDETSQMSDLPVKVIHVDSGKILTGMEAPKAGQL
ETWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEEEQPHSSATQAEEKKKIPDPDSEEVSE
VDVLHIIEHAKQDVDDEYGNASFNRGLQSYYAVAHAVTEKVDKQSTLLINGQLKQYQIKG
LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYE
FDKWAPSVVKVSYKGSPAARRAFIPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVD
EGHRMKNHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQ
WFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMS
ALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE
HLGYSGGIVSGPDLYRSSGKFELLDRILPKLRATDHKVLLFCQMTSLMTIMEDYFAYRNF
KYLRLDGTTKAEDRGMLLKTFNDPASQYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPH
QDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGC
ERRAFLQAILEHEEQDEVGARGGCRTRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDL
DRRREDARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSD
SLTEKQWLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGGPATPSSSSGRGRDKDEEVK
KAKKRGRPPAEKLSPNPLSLTKKMKKIVDAVIKYKDGSNGRQLSEVFIQLPSRKELPEYY
ELIRKPVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFT
SVRQKIEKDDESEGEESEEEDDDLDEGSESESRSVKVKIKLSRKEKGERGGKGQRRRGRG
ARAKPVVSDDDSEEEQEEERSASGSEED
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgaccccccgatgggagggacacctcggcctggaccctccccaggcccg
gggccatctccgggaggcatgatgggcccgagccctggtccctctccaggctcagcccac
agcatgatggggccgagcccgggccctcctggatctggacacccccaccctccacaggga
ccctcaggatatcctcaggacaacatgcaccaaatgcacaaacccatggaagccatgcat
gagaagggaatgcccgatgacccccgctacgcccagatgaagggcatgagcatgagacca
gggggacacagtgggatgggaccccctccgagccccatggaccaacattcccaaggttac
ccctctccgttgggaggctcagagcacgcacccagccctgtcccagccaacggccctccc
tctggccccatgatccccggaggtccctctggccccggtgctggccctatggagggcagc
ggggaccctaaccaggggatgggtcaacctaaccgcgggggtccccagggtccgggcgga
cccggcggcgcgggcggtggacccggcggtgcaggcggacccgctccgttcaaccagaac
cagttgcaccaactcagggctcagattatggcctacaagatgctggcccgcagccagccc
ttacccgagcacctgcagatggccgtgcaggggaagaggcccatgcccgggatgcagcag
cagccgatgcccaacatgccgccttctacggggcccggaggtgggcctgtgggtgggcct
gtgggtgggccgggaccagctcaggccaactacaacagaccacacggcatggtaggtcct
aatatggcacctcctggacctgcaggagttcccccaggtatgcaaggcccgcctaccaac
ggaccccctaaatcatggcctgaagggccgatggtgaatgctgcggccccgtcaaaccct
ccccagaagctgatcccacctcagcccacgggcagaccttcgcccgctcctccctcagtt
ccccccgccgcctccccagtaatgccgcctcagacgcagtccccgggacagcctgcccag
ccccctcccatgatgcttcaccagaagcagaaccgcgtgacccccatccaaaagccccgc
gggctggacccagtggagatcctccaggagagggagtacaggctacaggcgcgtattgct
caccgtatccaggagctggagaacctgccgggctctctggccggtgacctgcgcaccaag
gccaccatcgagctcaaggccctgaggctgcttaacttccagagacagctgcgtcaggag
gtggttgtgtgcatgcgacgtgacactgctttggaaacggccctcaacgccaaggcctac
aagcgcagcaaacggcagtctctacgcgaagcccgcatcaccgagaagctggagaaacag
cagaagattgaacaggaacgtaaacgtcgtcagaaacaccaggaatacctcaacagcatc
ctgcagcacgccaaggatttcaaggagtaccaccgctccatcacggcgaagctccagaag
gccaccaaggcggtcgccacctatcacgccaacaccgagcgcgagcagaagaaagagaac
gagcgcattgagaaggagagaatgcggaggctgatggctgaagatgaagaaggctaccgt
aaactcatcgaccaaaagaaagacaagcgcctggcctacctgctgcagcagacggacgag
tacgtggccaacctcactgagctggtgcgcgcgcacaaagccgtgcaagctctcaaagag
aagaaaaagaagaagaaaaagaagaagccagagactatggagggtggtgctcccaccctg
ggacctgatggagagcctttggatgagaccagtcaaatgagcgacctaccggtgaaggtg
atccacgtggacagtggaaagatcctgactgggatggaagcacctaaggctggccagctg
gagacctggctcgaaatgaacccaggatacgaagtagcgccgcgttcagacagtgaggaa
agcggttcagaagaagaggaggaggaggaggaagaggaagaggagcaacctcattcctct
gcaactcaagcggaggagaagaagaagatccctgaccccgacagtgaagaagtatctgaa
gtcgacgtcctgcacatcatcgaacacgccaagcaggatgtagatgatgagtacggtaat
gcaagtttcaaccgaggcctgcagtcctactacgccgtggctcacgctgtcactgagaaa
gtggacaagcagtccacgctgctgatcaacgggcagctcaagcaataccagatcaaaggt
ttggagtggctggtgtcgctttacaacaacaacttgaatggcatcctggctgatgagatg
ggtctggggaaaaccatccagaccatcgccctcatcacttacctcatggagtacaagcgc
ctcaacgggcccttcctcatcatcgtacctctctcaactctatcaaactgggtctatgag
tttgataagtgggccccatctgtcgtgaaagtctcctacaaggggtctccagctgctcgc
cgtgcattcattcccatcttgcgcagcggcaagttcaacgtgctgctcaccacatacgag
tacattatcaaagataagcaggtgctagcaaagcttcgttggaagtacatgattgtggac
gaaggccaccgtatgaagaaccaccactgtaaactgacccaggtcttgaacactcactac
ttggccccgcgccgcctgctgctcacaggcactccactgcagaacaagctgcccgagctc
tgggccctgcttaacttcctcctgcccaccatcttcaagagctgcaccacgttcgaacag
tggttcaacgcacccttcgccatgactggagagaaggttgacctgaatgaagaagagacc
atcctgatcatccgacgtttacacaaagtgctcaggcctttcctgctgcgccgactcaag
aaggaagtggaggcccagctgcccgagaaggtggagtatgtgataaagtgcgacatgtcg
gccctacagagggttttgtaccgacacatgcaggccaagggagtcttgctcacagatgga
tcagaaaaagacaagaagggtaaaggtggcacgaagaccctgatgaacactatcatgcaa
ctgagaaagatttgcaaccacccttacatgttccaacatattgaggagtctttctctgag
catcttggctattctggtggaatcgtgagtggcccggacctgtaccgctcatctgggaag
tttgagctgctggatcgcatcctgcccaagctgagggctactgaccacaaagtgctgctc
ttctgtcaaatgacctcactcatgaccatcatggaggactactttgcctaccgtaacttc
aagtacctgcgtctggacggaaccaccaaggcagaggaccgcggcatgctgctaaagaca
ttcaacgacccggcctcgcagtactttgtgttcctgctcagcaccagggctggaggcctg
ggcctcaacctgcagtcggccgacaccgtcatcatcttcgacagcgactggaacccacac
caggacctgcaggcccaggaccgagcccaccgcatcgggcagcagaacgaggtgcgcgtg
ctgcgcctctgcaccgtcaacagcgtggaggagaagatcctggcggcagccaagtacaaa
ctgaacgtggaccagaaggtcatccaggcgggcatgttcgaccagaagtcgtccggctgc
gaacgtcgggccttcttgcaggccatcctggagcacgaggaacaggacgaggtcggggct
cgaggaggctgtcgtactaggggggcgtgggaggaagacgaagtgcccgatgacgagacg
gtcaatcagatgatagccagaagtgaagaggagtttgaacagttcatgcgcatggatctg
gacaggcgccgcgaggacgcccgcaaccctaagaggaaaccgcgtctgatggaggaggac
gacatgcccagctggattctgaaagacgacgccgaggtcgagaggctaacttgcgaagag
gaggaggagaagatgtttggccgcggatcgcgccaacgcaaggaagtggactacagcgac
tcgctgactgagaaacagtggctcaaggccatagaggagggaaatctagaggacatcgag
gaggaagtgcgccacaaaaagacgaccagaaagcgcaagagagaccgcgaccacgacggc
gggccggccacgcccagctccagcagcggccgtgggcgggacaaggacgaggaggtgaag
aaggcgaagaaacgcggccgcccgcccgccgagaagctctctcccaaccctctgtccctc
actaagaagatgaagaagatcgtcgacgccgtcatcaaatataaggacggtagtaacggg
cgacagctgagcgaggtcttcatccagctgccctctcgcaaggagctgcccgagtactac
gagctcatccgcaaaccagtggacttcagaaagatcaaggagaggatccgcagccataag
taccgcagcctgaacgacctggagaaggacgtgatgctgctgtgtcaaaacgcccagacc
ttcaacctggagggctctctgatctacgaggactccattgtgctgcagtctgtcttcacc
agcgtgaggcagaagatcgagaaggacgatgagagtgaaggggaggaaagcgaggaagag
gacgacgacctggacgaaggctcggagtctgaatctcgctcggtgaaggtgaagatcaag
ctgagccggaaagaaaagggggagcgaggagggaaaggacagcggcggaggggccgcggc
gcccgggccaaaccggtggtgagcgacgacgacagcgaggaggaacaggaagaggagcgt
tcggccagtggcagcgaggaggactga
DBGET
integrated database retrieval system
