Perca flavescens (yellow perch): 114569306
Help
Entry
114569306 CDS
T07494
Symbol
rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114569306 (rbbp6)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114569306 (rbbp6)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
U-box type E3
114569306 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-CCHC
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
114569306
NCBI-ProteinID:
XP_028454932
LinkDB
All DBs
Position
15:complement(6451403..6504006)
Genome browser
AA seq
1915 aa
AA seq
DB search
MTHIHYKFSSKLSYDTVVFDGPHVTLRDLKRQIMGREKLRAGDCDLQITNAQNKEEYTDD
ESSIPKGSSVIVRRIPIIGGKSGSSKTRNVERSDVQHHAFGAYKAMDDQNSSRAVPFFSK
MQNLADADASEEDKIKVMMNQSTYDSMNYNKKFGTALPANYTCYRCGNTGHHIRNCPTSG
DKISEAPLKIKKSTGIPRSFMVEVDDPNIKGAMLTNSGRYAIPTIDAEAYAIGKKERPPF
GPQEETKSEGEEDPVPEELLCLICHDLLSDAVVIPCCGNSYCDDCIRTALLDSEEHVCPT
CSQSDVSPDTLIANKFLRQAVDNFKKERGFTKSQRKGCGTSQSQNPTPTASPVPTPPPLA
MLSQPPKPHLPTHSQQDPLRSHAADTPPSSQVCGAPPTVTGPASAPNTPSTSLQPAQSHL
EIPDKESEEKTHDDSAAAAATSVPVSPEEPTDAPSQLIPMVVPAAVAEQPQTVSVNLLQP
SSGPAPRPYGPSASWDSPSSSSGCPIGGWNESNPQQPPPSSSSYPATPPPPLFPSPNFHT
FLAAHQPLSGYPPGYPPPAPVWTLPNLPGAPIPSLCPSTSIPALIPKEWYSHQRKKKERS
PHRGSSHRRSSSRSYSKSSKSKSSRSYSRSSSRSRSRSRSQSRSRPQSPYSRERDLQTRS
HSSHSYSYGYKRSPTPSSSSSPRVGYRARSKSPSGHRKNSHHSRHHSKKSASSSYNSRRQ
GERSQREAGGSGGSNLYAQHANQSSSLDLNTKCYLQWKREYKEWYDKYFHSYVGHFQLPL
PLLNLPPPPPPQWGGREGSGNPSHGSSRSRDRFQDRRGARTDGCSPPSQSSSDSRSPPSQ
SSRDSRSTPSRSSSDSRSSPSHSSNDSRSPASRSSSDGRATPSEDGAPPTACQQRCAEKS
SRLPIALTKGGTEAKPQERSEDDKPLMAKNLENLSTLKHEEGRGGGESSPNAAGSTYNSR
KNKRRPYTGPNACKDGTPARDQATGSDALEPVQSLVKPDKRLDKDYERKSREQRNLEIEK
GCRRGKHSDSRQDVGRRHKERPSKEASRADPDRHRYPGGSRDYDSRSEKNRKRKGEDIGR
SSVKAQSSKCLKTKVAEDPKTRKSESPNPFERTKPKTEKKKEKTTCPLTEREIWEGGIKV
KPQKKISININLEGARKDGKTENRDVSHSESVTGRSKEEMEKAGNGEEKLNGGETMKANE
KKRDVEGLSEEKIKPGEGEARQKWEKATFRDDTREMLGEIAGEKKDVGEKKEDREKEDFD
LWHSPLSGVAQEKERKEGRAMGELFAGTRNERAEGESTCQENRGIPPGESKPKEELIKGA
KWRMRKDEEEADNGDNTMRSKSQRGRNESHHDTPNTAAHDGSSYEDHQEGNTGLKTLGEY
TQDRAADLEDELKLIQVPRSKWEKEESEEGERVEGVSKVQTDALATFPPSPSVSVTTETT
TNRDAENEEKRARSVETEREEASAMERGRDRERAREKTPVLSSSQRSVAPSSGKDRTDGA
LCTDRDGERRMEMERPGDRERGRESERQKESKRSKERAREEENGRDRKRERGHSSIATAP
KRNPPSSSHSYSYSTQTHDTERRDRQRGGDTDGNKSSSCPGGKFSGGRSRESSAISRANE
RLGQNTPKSYRDTPLDSKFKDKDHSHCCQNPQAPSGNYRPAGTHHSPPSLSHSRGKERDP
LSSGAELGKPRISSPGQEFMQHRSRNESRVEKEEWKQRKATKGIGERESQEMVPERGGSR
CQDEADELDGQTKWERGRELEEGERPSSRSNSVSSSSSQENGRDGERKENKNQKRRQKEK
RRSSPELLEEGELKKHKPKKKTSKKSRDGGEEESASLESTPERGTKATQGKVVSKRTGRK
AHKEAASVNPHVAALIEGPHHALLSLLNPEPSAEALDGWRKETGEVWEQREEGGD
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgactcatattcattataaattctcctccaaactcagctacgacactgtggttttcgac
ggcccgcacgtcaccctgagggatctgaagaggcagatcatgggcagggagaagctgcga
gccggggactgcgacctgcagatcacaaacgcccagaacaaagaagagtacacagatgat
gagagttcgatccccaaaggctcctcagtcatcgtcaggagaatcccaatcattggagga
aagtccggcagcagcaagacccgcaacgttgagcgatcggatgtccagcaccacgccttt
ggagcctacaaagcaatggatgaccagaattcttccagagccgtaccctttttctccaag
atgcagaacctggctgatgccgatgcgtcagaagaggataagattaaagttatgatgaat
cagtcgacctacgactccatgaattacaacaagaagtttggtactgcacttcctgcgaac
tacacctgttatcgctgtggaaatactggacaccacatcaggaactgtcccaccagcggg
gataaaatctcagaggcccctctgaaaattaagaaaagcacaggcatccctcgttctttc
atggtagaggtggacgatccaaacataaagggagccatgctgaccaactctggacgctac
gcgattcctaccatagacgctgaggcatacgctattggcaagaaggagaggcctccattc
ggtccacaagaggagacaaagtcagaaggtgaggaggatcctgtacctgaggaactcctc
tgtctgatctgccatgacctgctgagtgacgctgtggtcataccctgctgtggaaacagc
tactgtgatgactgtattcgtactgccttactggattcagaggaacacgtctgccccact
tgcagccaatcagatgtctcacccgataccctgatagccaataaatttctccgacaggct
gtggacaattttaagaaagagcgaggcttcactaaaagtcagagaaaagggtgtggtacc
tcccaatcccaaaatccaaccccgacagcgagccctgtccccaccccgccccctctcgct
atgctgagccaacctccaaagcctcacctgccaacccacagccagcaggaccctctccgc
tcgcatgctgcagacacaccgccatcgtctcaggtgtgtggggctccgcccacagttacg
ggccccgcctctgctcccaacacgccaagcacttccctccagcctgcgcaaagccacctg
gagatacctgacaaagagtctgaagaaaagacgcacgatgactcagcagctgctgccgcc
acgtctgtgccggtttcaccggaagaacccactgatgctccatcgcagctgataccaatg
gttgtccctgctgcagtggcagagcagccccagacagtcagtgtgaatctcctgcagccc
tcctcaggtccagccccaagaccctatgggccatcagcgtcctgggatagcccctcttcc
tcctcgggttgtcctattggaggctggaatgagtctaacccccagcagccccctccctcc
tcctcttcatatccagcaactcctccacctcctctctttccctcccccaatttccacaca
ttcctcgccgctcatcagcctctcagcggttacccccctggatacccaccccccgcgccc
gtctggacactcccaaacctcccgggtgcccccatcccttccctgtgcccctctacctcc
atccctgccctcatcccaaaggagtggtacagtcatcagagaaagaagaaggaaaggtca
cctcaccgaggatcttcccacagacgctcttcctctcgttcttattcaaagtcttccaag
tccaagtcttctcgctcgtactctcggtcttcaagcagatccagatcccggtccaggtcc
caaagcagatcaaggccccaatctccttactcccgcgaaagagacctccaaacccgctct
cattcctcccactcctatagctatggttacaaacgttcccctacaccgtcctcgtcatct
tcacctcgagtgggttaccgtgccaggtccaagtcaccgtcaggtcaccgcaaaaacagc
catcatagccggcatcacagtaagaaatccgcttcgagcagctacaactccaggaggcaa
ggagaacgctcccagagggaagcggggggctcggggggaagtaacctgtatgcccagcat
gcaaatcaaagtagcagcctggacctgaacacaaagtgctacctgcagtggaaaagggag
tacaaagagtggtatgataaatatttccacagctatgtcggccacttccagctgcctctt
cccctcctcaatcttcctcctcctcctcctcctcagtgggggggccgagaaggaagcgga
aatccctcgcacggcagctcccgctcccgtgaccgattccaagatagacgcggcgcccgg
acggacggctgctcccctccatcgcagtcatccagtgacagccgctcccctccatcccag
tcttcacgtgacagccgctccacgccatctcggtcctccagtgacagccgctcctctccg
tcgcactcgtccaacgacagccggtcccctgcctctcggtcgtccagcgacggacgcgcc
acgccgtccgaagacggagctccgccgacggcatgccagcagaggtgcgctgagaagtcc
agccgcctgccaatcgcgcttacaaagggcggtacggaagcgaaaccgcaagaaagaagt
gaggacgataagccgctgatggcgaagaatttggagaacctcagcaccttaaaacatgag
gaaggaagaggagggggggagtcatcccctaatgctgcaggctcaacgtataacagcaga
aagaacaagaggaggccttacactggaccaaatgcctgcaaggatggcaccccagcacgg
gaccaagcaactggcagcgatgccttagaaccagtccaatcactcgtgaaaccagataaa
cgtttggataaagactacgaaagaaaaagcagagaacagaggaatttggaaattgagaaa
ggatgtagaagaggcaaacattcagactcccggcaggatgtggggagacggcacaaggaa
aggcccagtaaagaggcaagcagggcggatccagacagacacagataccctggaggcagc
agggattatgactcgagatcagagaagaatagaaaaagaaaaggagaggacattgggaga
agttctgtaaaggctcaaagcagcaaatgcctgaaaactaaagttgcagaggaccccaaa
acccgcaagagcgaatccccgaatccgtttgagagaaccaagccgaaaacggagaagaaa
aaggagaagacaacatgtcctctgacagagagagaaatctgggagggagggataaaggtg
aaaccgcagaagaagataagcatcaacataaacctggaaggagcgaggaaggacgggaaa
actgaaaaccgggacgtgtctcattcagagagtgtcactggaagatcaaaggaagaaatg
gagaaggctggtaacggagaggagaagttaaatggaggagagacgatgaaagcaaatgaa
aagaagagagacgtggaaggtttgtcggaggaaaaaatcaaaccaggtgaaggagaggca
agacagaaatgggagaaagctaccttcagagatgatacgcgagagatgttgggggaaatt
gcgggagagaaaaaagatgtgggagagaagaaagaggacagagaaaaggaagactttgac
ttatggcacagcccccttagcggagtggcgcaggaaaaggagaggaaggaaggacgagcg
atgggagagttattcgcaggtacccggaatgagagggcagagggagaaagcacatgccag
gaaaacagaggaatcccgccgggggagtcaaagccaaaggaggagctgataaagggagcg
aagtggaggatgaggaaagacgaagaagaagcagacaacggcgacaacacaatgaggtcc
aagtcacaaaggggccgaaacgagagccaccatgacacaccaaacaccgcggcgcacgat
ggcagcagctacgaggatcatcaggaagggaacacagggttgaaaactctgggagagtac
acccaggacagagctgcagacctagaggacgagctcaaactcatacaggtccctcgctcc
aaatgggagaaggaagagtctgaggaaggggagcgggttgaaggagtgagcaaagttcaa
acagatgcacttgccacgtttccgccttcgccgtccgtgtccgtgacgacagagaccaca
accaacagggatgcagagaatgaagagaagagagcgaggtcagtggagacggagagagag
gaggccagcgcgatggagagaggtagggacagggagagagcgagggagaaaacccccgtt
ctgtccagttcacagaggagtgtggctccctctagtggcaaagacaggactgacggcgcc
ttgtgcacagaccgagacggggagagaaggatggagatggagagaccgggggacagagag
agagggagggagagcgagaggcagaaagagagcaaaagatcaaaagagagagcaagggag
gaagagaatgggagagacagaaagagagagagagggcacagcagcattgccaccgcccca
aagagaaatcctccctcctcttctcactcctactcttattcgacacagacacatgacaca
gagaggagagacaggcagagagggggcgacacggacggcaacaagagttcctcctgtccc
ggcgggaaattctccggtggcagaagcagggaaagcagcgcaataagcagagctaacgaa
cggcttggtcaaaatacccccaaatcatacagagacacgccactggattcaaaatttaaa
gacaaagaccattcccactgctgccaaaatccccaagctccatcagggaactacagacct
gcagggacccaccactccccaccttccctctctcacagccggggtaaggagagagaccca
ctctcctccggggcggagctgggtaagcccagaattagcagccctggtcaggagttcatg
cagcacagaagtagaaatgagagccgggttgaaaaggaggagtggaagcaaaggaaggca
actaaaggcataggagagagagaaagtcaagagatggtgcctgagagaggaggtagtcga
tgccaggatgaagccgacgagttggacggacagacaaagtgggagcgagggagagagctg
gaggaaggggagaggcccagcagccgcagcaacagcgtcagttcatcatcaagccaggag
aacggcagggacggcgagagaaaagagaataagaaccaaaagaggcgccaaaaggagaag
agacgatcctccccagagctgctggaggaaggggagctgaagaaacacaaacccaagaag
aagacgtcaaagaaaagcagagacgggggagaagaggagagcgcttccttggaatcaacc
cccgagaggggaacaaaggccacccaggggaaggtggtgtcaaagaggacggggaggaag
gcccataaagaggcagctagtgtgaatccccatgtggcagctctcatcgagggcccccac
catgctctgctgtcgttgttgaacccagaaccatctgctgaagcacttgatggttggagg
aaggagacgggggaagtgtgggaacagagggaggagggtggggactga
DBGET
integrated database retrieval system
