Perca flavescens (yellow perch): 114569331
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Entry
114569331 CDS
T07494
Name
(RefSeq) transcription factor Sox-9-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114569331
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114569331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114569331
NCBI-ProteinID:
XP_028454956
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All DBs
Position
15:complement(12952557..12956436)
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AA seq
479 aa
AA seq
DB search
MNLLDAYLKMTEEQEKCHSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSDNHLLLGPDYK
KEGEEEKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKSKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNEVEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQNDPEDGEQTHISPNAIFKALQQADSPASSLGEVHSPGEHSGQSQGPPTPPTTPKT
DLHSSKADLKREGRPMQEGTSRQLNIDFGAVDIGELSSEVISNMGSFDVDEFDQYLPPHS
HAGVPGAAQAGYTSGYGISSSSVSQVANVGAHAWMSKQQQQQHSLTTLGGGGEQGQQGQQ
RTTQIKTEQLSPSHYSEQQGSPQHVTYGSFNLQHYSSSSYPSITRAQYDYSDHQGGANSY
YSHAAGQSSGLYSTFSYMSPSQRPMYTPIADTTGVPSVPQTHSPQHWEQQPIYTQLSRP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccttgacgcttacctaaagatgacagaagaacaggagaagtgtcactctgac
gctcccagtcccagcatgtctgaggactccgcaggctcgccgtgcccatctgggtccggt
tcggacactgagaacacccggccgtccgacaaccacctcctcttgggtccagactacaag
aaggaaggcgaagaagaaaagttccccgtgtgtatcagagatgcggtgtcccaggtgttg
aagggttacgactggacgctggtgcccatgccggtgcgcgttaacggctcaagtaaaagt
aaacctcacgtcaaaagacccatgaacgcattcatggtctgggctcaagctgcacggagg
aagctggccgatcaatacccgcatctgcacaacgcggaactcagcaaaaccctgggcaaa
ctttggagattgctcaatgaagtagagaagcgcccgtttgtggaagaagctgagcgtttg
agagtgcagcataagaaggaccaccccgactacaaatatcagccaaggaggagaaaatct
gtcaagaacgggcaaaacgatcccgaggacggcgagcaaacccacatctctccaaatgcg
atcttcaaggcgctgcagcaggccgattctccagcgtctagtttgggcgaggtgcattct
ccaggagagcactcaggtcagtcccagggcccaccaacacccccaaccacccccaagaca
gacctccactctagcaaagctgatttgaagcgcgagggtcgccccatgcaggagggcacc
agtcgccagctcaacatcgactttggagctgtggacattggtgagctgagcagcgaggtc
atctccaacatggggagctttgatgtcgatgagtttgatcagtacctgccacctcacagc
catgctggggtgcccggagcggcccaggctggctacaccagcggctacggcatcagcagc
tcctcagtcagccaggtggccaatgtcggggcccacgcctggatgtccaagcagcagcag
cagcagcactctctgacaaccctgggcggaggaggagagcaaggccagcagggtcagcag
agaaccacccaaatcaagacagagcagctgagtcccagccactacagtgagcagcagggc
tccccacagcacgtcacctatgggtccttcaacctgcagcactacagcagctcctcttac
ccctccatcacaagagcacagtatgactactcagaccaccaaggtggtgccaactcctac
tacagccacgcagctggccaaagctccggcctgtactccaccttcagctacatgagcccc
agccagaggccgatgtacactccgatcgctgacaccaccggggtgccctctgttccccag
acccacagtccgcagcattgggagcagcagcccatttacacacagctctccaggccatga
DBGET
integrated database retrieval system
