Perca flavescens (yellow perch): 114569374
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Entry
114569374 CDS
T07494
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114569374 (aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114569374 (aptx)
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
114569374 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
114569374 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
114569374 (aptx)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
114569374 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
114569374 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
114569374
NCBI-ProteinID:
XP_028454992
LinkDB
All DBs
Position
2:complement(25916833..25919457)
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AA seq
333 aa
AA seq
DB search
MPICWLISEEGNHKPIRLPHLQTVVLGRGPETTIKDKKCSRQQVELKAECNKGYVKVKQL
GVNPTSIDSVVVGKDSEVKMKPGQQLHIVNQLYPYTVQFKEDPTGHHSGTKRPRELASED
KESCREASSMKTAKQTDKVSVSVSHEEATKNSEGFGHWSKGLKTSMQDPKMQVYKDDKVV
VIKDKYPKARYHWLVLPWQTISSLKALRGEHCDLVKHMQKVADQMVQQCPDASLLRFRTG
YHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFMESHSVIQMLETNGRVTVKEGT
SELLKLPLCCHMCHKELSTIPALKEHLKSHFPS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttgctggcttatcagcgaggagggcaaccataaacccattcgactgcctcac
ttacagacagttgttctgggtcgaggtccagagacgactattaaagacaaaaaatgctct
cggcagcaagttgaattaaaagcagaatgcaacaaaggttatgtcaaagttaaacagctg
ggcgtgaacccgacctccatagactctgtggtggtgggtaaggacagtgaggtgaaaatg
aagcccggacagcagcttcatattgtcaatcagctctacccatacactgtacagttcaag
gaggatcccaccgggcaccacagcggcaccaaaagacccagagagctggcttcagaggac
aaagagagctgcagagaggcttcaagcatgaaaacagccaaacagacagacaaggtctct
gtgtcagtcagccatgaagaagccacaaaaaacagtgaaggttttggacattggagcaaa
ggtctgaagacctcaatgcaagacccaaagatgcaggtgtacaaggatgataaagtagtg
gtaatcaaagataaataccccaaagctcgctaccactggctggtcctcccatggcagacc
atttccagcttaaaggccttacgtggggagcactgtgacctggtgaaacacatgcagaaa
gttgctgaccagatggttcagcagtgcccagatgctagcttgctacgtttccgcacaggg
taccatgccattccaagtatgagtcatgtacacctccatgtgatcagccaagacttcgac
tctccttgtttaaagaacaaaaagcactggaactcattcacaactgactatttcatggag
tctcacagtgtcattcagatgcttgaaacaaatggaagggtcaccgtcaaagaaggaacc
agcgaattgttgaaactacctctctgctgtcacatgtgtcacaaagagctttctactata
ccagctctaaaggaacacctgaagtctcactttcccagctaa
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