Perca flavescens (yellow perch): 114569788
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Entry
114569788 CDS
T07494
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114569788
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114569788
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114569788
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114569788
NCBI-ProteinID:
XP_028455651
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All DBs
Position
15:2151033..2161943
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQGAPESAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSSVKAAVFFGGMVIRKDEEVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFKITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgatgttgataacgagctgctcgactacgaagaagatgaggagcctcaa
ggagcgcccgagagcgcggtccccgcaggcaagaaggaggtcaagggttcctacgtttcc
atccacagctctggcttcagagactttctgctcaaaccagagctgctccgcgcaatcatc
gattgtggttttgagcatccgtctgaagtccagcatgaatgcatcccacaggctatcttg
ggcatggacatcctgtgccaagccaagtctggtatgggaaagacggcagtgtttgtgctg
gccacactgcagcagattgaacccgttgatggacaggtgtctgtgttggtcatgtgccac
acgagagagctggccttccaaatcagtaaagagtacgagcgtttctccaagtacatgtcc
tcggtgaaggcagccgtgttctttgggggcatggtcatcaggaaggacgaggaagtcctg
aagaagaactgtccccatatcgtggtcggaacccccggccgcatcctcgctctcatccgc
aacaagacgctcaatctgaagaacgtcaagcacttcgtcctggatgagtgcgacaaaatg
ttggagcagctagacatgaggcgtgatgtacaggagattttcaagatcacaccccatgag
aagcaggtcatgatgttcagcgccacgctgagcaaagagatccgaccagtctgccgcaaa
ttcatgcaggatcccatggaagtatttgtggacgacgagaccaaactgacactccacggc
ctgcagcagtactactgcaagctgaaggacagcgagaagaaccgcaagctctttgacctg
ctcgacgtgttggagttcaaccaggtggtgatctttgtcaagtcagtgcagcgctgcatt
gctctggcccagcttctggtggaacaaaatttccctgccattgccatccacaggggaatg
gctcaggaggagaggctgtctcgctatcagcaatttaaggacttccaaaggcggatcctg
gtggccactaacctctttggccgagggatggacattgagcgggtcaatatcgtcttcaac
tacgacatgccagaagattctgacacctatttgcacagggttgcccgtgctggcaggttt
ggaaccaaaggcctggctataacctttgtgtcagacgagaccgacgccaagactctgaac
gatgttcaggaccgttttgaagtcaacgtggccgagctgccagacgagatcgacatctcc
tcttacatcgagcagtccagatga
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