Perca flavescens (yellow perch): 114569990
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Entry
114569990 CDS
T07494
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
114569990 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114569990 (hdac5)
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114569990 (hdac5)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114569990 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
114569990
NCBI-ProteinID:
XP_028455974
LinkDB
All DBs
Position
15:complement(27576313..27658939)
Genome browser
AA seq
1103 aa
AA seq
DB search
MNSSHTSVVEVKSSLPSGMQSPGGTASEQRGGGGEGGGGPGEGPGAGGGGSPVDLRTEPR
VCSLSAGAAAAAVDTAMREQQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQ
EHLKVCVCKQQQELLAAKRQQELEQKRKLEQQRHEEQEKHRLEQQLLLLRNKEKGKESAI
ASTEVKLKLQEFLLNKKEPGIGGLNHSFSPKCWGAQHISLEQGSPPQSNTPGTPPSYKLP
PLLGNYEGKDDFPLRKTVSEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEI
SVSSLCSSAPGSGPSSPNSSNSAISNGNTGSVPNIQTELRSLHQTLGADGTLSPLNLYTS
PSLPNISLGLPANTHITPSQALSNQQEAERQAIQSLRGGGALTGKFLSTSSLPAGVGHEV
ETPPPTSHSAHSSLLQHVLLLEQARQQTAMLAVPMYSQSPLVTAERGVPSSMRAVNKLPR
HRPLARTQSAPLPQSPQALQQLVVQQQHQHFLEKHYKMLSKGTELPRPPPTHPEETEEEL
TETNDMQEDDEGASLHRLQKEGSDDSTPSSEHAVVHVKGEEEHGGMRVKGESTESELDEE
EEEDELIQLRECDEEERGSYTQALQQLGVFQSLLPHRPLGRAQSSPAATVNPIKHLFTTG
LVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQSVH
SEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMA
VGSVIELAFRVASAELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKI
LIVDWDIHHGNGTQQAFYTDHNVLYISLHRYDDGNFFPGSGAPEEVGSGAGVGFNVNIAW
TGGVEPPMGDVEYLTAFRSVVMPIAQQFSPDVVLVSAGFDAVEGHQSPLGGYNVSAKCFG
QLTQLLMGLAGGRVVMALEGGHDLTAICDASEACVAALLGDPCDSVFQWPQEQPCPKAWA
SLERVIEIQSKHWSCLQSLSQTSGHSLLESSPLGAQGQSEKDEADTVSAMASLSVDVEQP
GSDPDNTETSRSTEEPMEEEPVL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatcacacacctcagtagtggaggtgaagagcagcctcccatcgggcatgcag
agcccaggaggaacagcaagcgagcagagaggaggaggtggagaagggggtggtggtccg
ggagaaggcccaggagcgggaggcggaggcagcccggtggatctgcggacggagcccagg
gtgtgctctctgtcggcgggcgcggcggcggcggcggtggacacagccatgagggagcag
cagctccagcaggaacttgtgctactgaaacagcagcaggagctccagaaacagctgctg
tttgccgagttccagaaaaaacacgaagtgctcaccagacaacacgaggtccagctgcag
gaacacctgaaggtgtgtgtgtgtaagcaacaacaggagctgttggcggcgaagcggcag
caggagctggagcagaagaggaaactggagcagcagaggcacgaagagcaggagaaacat
cggctggagcaacagctgctgctgctccggaacaaggagaaaggcaaagagagtgcaatt
gccagcacagaggtgaagctgaagctgcaggagttccttctcaataagaaagaaccaggc
atcggtggactgaaccattccttctccccaaagtgctggggagcccagcacatctccctg
gagcagggctctcctccgcagagtaacactccaggaactcctccctcctacaaactgccc
ccactgctgggaaactacgagggcaaagacgacttcccgctccgcaagacagtctcagag
cccaacctgaaggtgcgttcacggctgaagcagaaggtggcagagaggcggagctctccg
ctccttcgcaggaaggatgggaccgttatcagcacctttaagaagagagccgtagagata
tctgtctcctctctctgtagtagcgctccaggttcaggtcccagcagccccaacagttcc
aactcggcaatctccaatggcaacacagggtcggtccccaacatacagactgagctgaga
tctcttcatcagacgctgggggctgatgggacattaagtcctctgaatctctacacctcg
ccgtccttgccgaatatctccttggggctccctgccaacacacacatcacgccctcccag
gcgctgtccaaccagcaagaagctgagcggcaagccatccaatcactgcgagggggcgga
gctctaacagggaagtttctctccacgtcgtccctacctgcaggggtgggccatgaggta
gagacaccaccccccacctctcattctgcccattcctcgttgttgcaacatgtactactg
ctggagcaggccagacaacagactgcaatgctagctgtccccatgtacagccagtcgccg
ctggttacagcggagagaggcgtgcccagcagcatgcgggctgtcaacaagttgcctcgc
catcggccgctggctcggacccagagtgcacctctgccccagtccccccaggccctgcag
cagctggtggtccagcagcaacaccagcacttcctggagaaacactacaagatgctatct
aaggggacggagcttcccaggccgccgcccacccacccggaggagacagaggaggagcta
acagaaaccaatgacatgcaggaggacgacgaaggggccagccttcacaggcttcagaag
gagggctcagacgacagcacgccctcctcggagcacgccgttgtgcatgtgaagggcgag
gaggagcacggaggcatgcgcgtgaagggggagagtacggagagcgagctggatgaagag
gaagaggaagacgagctcatccagctgagggagtgcgacgaagaggagagggggagctac
acgcaggccttgcagcagctgggtgtgttccagtccttgttgccccatagacctctggga
agagcgcagtcgtcccctgcagccactgtcaatcccatcaagcacctcttcactacaggg
cttgtgtacgacagtctgatgttgaagcatcagtgtgtttgtggcaatgctcacatccac
ccagagcatgctgggagagtgcaaagcatctggtccagactgcaggagacgggcctgctg
ggccgctgtgagaggattcgggggcgtaaagcgtctctggatgagatccagtcggtccat
tcagagttccacactctgctgtatggaaccagtccgctgaatcgacacaaactggaccac
aagaagctgctgggtccaatcagccagaagatgtatgcggttcttccctgtggaggaata
ggggtggacagcgacacggtgtggaacgagatgcactcgtcagcggcagtccgcatggcg
gtgggctcagtcatcgagctggccttcagagtggcgtcggcagagctgaagaatggcttt
gcagtggtgcgtccacccggtcaccatgctgaggaatccactgccatggggttttgtttc
tttaattcagtagccatcactgccaagctgctgcaacagaaactaggagtgggcaagatc
ctcattgtggactgggacattcaccacggcaacggcacccagcaggccttctacaccgac
cacaacgtcctctacatctccctccatcgctacgacgacggaaacttctttcctggcagc
ggagcgcctgaggaggtgggatcaggtgcaggtgttggttttaatgtgaacatagcgtgg
actggtggagtagagccgcctatgggtgatgtggagtacctcaccgcctttaggagcgtg
gtgatgcccatcgcccagcagttcagtccagatgtggtcctggtgtctgcaggcttcgac
gcagtggagggtcatcagtctcctctgggaggatacaacgtctccgccaagtgtttcggt
cagctgacgcagctgctgatgggtctggcgggcgggcgcgtcgtcatggcgctggaaggc
ggtcatgacctcacagccatctgtgacgcatcagaggcctgcgtcgctgcgctgctggga
gacccgtgtgactctgtgttccagtggcctcaggagcagccatgtccaaaagcctgggcc
tcgctggagagagtcatagagatccagagtaaacactggtcttgtctccagagtttgtct
cagacgagcggccactcgctattggagtcgagtcctctcggggctcagggccaatcggag
aaggacgaggccgacacggtcagcgccatggcctccctaagcgttgacgtcgagcagccg
ggctcggatcctgacaacacagaaaccagcaggtccacggaggagccgatggaagaagag
cctgtattgtag
DBGET
integrated database retrieval system
