Perca flavescens (yellow perch): 114570140
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Entry
114570140 CDS
T07494
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B isoform X1
KO
K16360
netrin-G3 ligand
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114570140 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114570140 (lrrc4b)
Cell adhesion molecules [BR:
pflv04515
]
Immunoglobulin superfamily
NGL family
114570140 (lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
114570140
NCBI-ProteinID:
XP_028456182
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All DBs
Position
15:20774128..20778905
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AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDKESALVAINETFIRVYPGP
TPSGHVWPEGVPTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGSSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTGTGVGLNN
NNNPLSCSQSQNTSISCSQVTTSGGTPTGGTLPSPVPLPQLGLHSSLKGLMGKSQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctcctactgcggctcctcctccctgggccggagttggtgggagccgcttcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaacctg
gaggaggtgcccgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactcc
atacaggttatcaagtctgacactttcaagcacttgagacaccttgagatcctccagcta
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acattggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctacgggagctgtggctgcgcaacaaccccattgagactctgccaggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctctgacgcagcctttgtgggcctcatcaatctacgctacttgaacctgggcatgtgt
gggctgaaggacattcccaaactgacagcgcttgtgcgtttggaggagctggagctgtca
ggaaaccgactggagatcatccgacctgggtccttccagggcctggtgtccctacgcaag
ctgtggctaatgcactcacaggtgtccgtcattgagcgcaacgcctttgatgacctgaaa
agcctggaagagctcaacctgtcccataactccctgcactccttgccccatgacctcttc
acgcctcttcaccagctggagagagtacacctcaaccacaacccctggatttgcaactgt
gatgtgctttggttaagttggtggttgaaagagacggtgcccagcaacaccacctgctgt
gcccgctgccacgctcccccagtcttaaagggcaagtacattggagagcttgaccagagt
cacttcacctgctttgcaccggtcattgtggaaccacctacagacctcaatgtcaccgag
ggtatggctgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
accccgaatggcacgctaatgacccatggctcctaccgggtgcggatatccgtcctgcat
gatggcactctcaacttcacaaatgtcaccctgcgtgatacgggccagtacacctgcatg
gttaccaatgctgctggcaataccacggcaactgctgtcctcaatgtcaccgccgctgat
gccagtgtcaactacacctactttacaacagtcacagtggaaacagtcgagaccccggga
gataaagagtctgcattggtagccatcaatgagacattcatacgtgtttaccctggcccc
acgccctcgggccacgtgtggccagaaggtgttcctaccactgcctcctctctgtcagca
ggctggtcctcctcctctcctcgggccacccgaccaacgttcactgtgcccatcactgag
ccaggcttctcaggcttggatgatgtgatgaagaccaccaagatcatcattggctgcttc
gtagccattaccttcatggcagcggtgatgcttgtggtgttctacaagctgaggaaacaa
caccagctacataaacaccacggccctgctcgtgctatcgagatcatcaatgtggaggat
gagctgggggctggggccagtggtcggggaagcggcatctcaggaggctccacggtgacg
cagagcggaagcagtggaataggagggggccagagcctcaggctgcaccacccagagata
gtaaacctgccgaacctggcccgatcagagcacctcaaccactactacaaaacccatcac
ttcaacaacaacatgatgggcctgggcatgggcacaggcactggtgtgggtctcaacaac
aacaacaaccccttgtcttgctctcagtctcagaacacatctatatcctgttcccaggtg
acgaccagtggaggaacacccacaggtggcaccctgccctcccctgtgcccctgccccag
ttgggtctccacagttctctgaaaggccttatggggaaaagccagaatgagcccctgctt
tttaagagcggctccaaggaaaatgtgcaagagactcaaatttga
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