Perca flavescens (yellow perch): 114570158
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Entry
114570158 CDS
T07494
Symbol
mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04120
Ubiquitin mediated proteolysis
pflv04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114570158 (mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114570158 (mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114570158 (mgrn1)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114570158 (mgrn1)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114570158 (mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
114570158
NCBI-ProteinID:
XP_028456210
LinkDB
All DBs
Position
15:complement(15727039..15737310)
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AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDNPVEEGGKPKVQYSV
EFTFDADARVAITLYCQAFEEFANGMAVYSPKNPSLVSETVHYKRGVSQQFSMPSFKLDF
CEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSTDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDEINFSGGVGSDSRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDEDR
MHSGGDILQDCSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCPTSSL
HMEDEHLNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgcagaatcgctggtgttgaggatatcgatatccaggccaac
tcggcctatcgatttcccccgaaatctggtaattattttgcgagccacttcttcatggga
ggagagaaatttgacacaccacatccagagggatacctttttggagaaaacatggacctg
aattttcttggaaataggccagtccagtttccatatgtgacgcctgcaccccatgagcct
gtgaaaaccctgaggagtctggtcaacattagaaaggactctctgcgtttggtcaggtat
aaagatgactctgacaatccggtggaggaaggtggaaaaccaaaggttcagtatagtgtg
gagttcacctttgatgctgatgctcgagtggccatcaccctctactgccaagcatttgag
gagtttgccaatgggatggcagtgtacagcccaaagaatccatcactggtctctgaaact
gtgcattacaagcgaggggtgagccaacagttctccatgccatctttcaaattagatttc
tgcgagtggaaagaagaagatctgaactttgaccttgaccgaggagtgtttcccatggta
atccaagctgtggttgatgaaggggacgattgccttggacatgctcacgtccttttggca
gcctttgaaagacacgttgatggcagtttctccgtcaagcctctcaagcagaagcaaatt
gtggaccgtgtgagctacctcttacaggagatctatgggattgagaacaaaaacaaccaa
gaaacaaagccatctgacgatgagaacagcgacaacagcaacgagtgtgttgtctgtctg
tccgacctgcgagatacactcatcctgccctgcagacatctgtgtctctgcaactcctgc
gcagacactctgcgttaccaggccaacaattgtccgatctgcagactgcccttcagagcc
ttgctgcagatcagagctgtgaggaaaaagcctggtgctctttcccctgtatccttcagc
cctgttctggctcagactatggaccatgacgagcactctagcacagactcggttcctccc
ggctttgaacccatctcactgttagaggctttgaatggtctgcggtcagtttctcctgcc
atcccatcggcacccctctacgatgaaatcaacttctcagggggtgtgggcagtgacagc
agacagctgagctccccagagcatttaagtgatgggagtctgcagaaaggcaaagtcagc
aagtcacctgacagtacccttaggtctccatcgtctcccatccaggaagaagatgaggag
aagctgtctgagatgtctgatgctcagcctcacacactgctgtccagcagccccgccccc
actgacgccacagcaaccgaggacgtggcagaatccctgtctccagatgacgaggacagg
atgcattctggaggagacatcctacaggactgcagcagtgaacacagcagcttgaccaaa
acagagagcgacccaccgggcgacttgtctctcccaggttcatcagaatcaacagaaagc
ctgaaaagtcagagcacaaactgctccagccagcctctcctgtgtcccacgagcagcctt
catatggaagacgagcacctcaatccctga
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