Perca flavescens (yellow perch): 114570177
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Entry
114570177 CDS
T07494
Name
(RefSeq) DDB1- and CUL4-associated factor 7
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114570177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114570177
03036 Chromosome and associated proteins [BR:
pflv03036
]
114570177
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114570177
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
114570177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
MIOS_WD40
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
114570177
NCBI-ProteinID:
XP_028456235
LinkDB
All DBs
Position
15:complement(20289012..20291645)
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AA seq
268 aa
AA seq
DB search
MWIPDTKGVYPDLLATSGDYLRIWRVSDTETRLECLLNNNKNSDFCAPLTSFDWNEVDPN
LLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFAS
VGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRV
PCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEG
EINNVQWASTQPDWIAICYNNCLEILRV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcccagacactaaaggggtgtacccggacctgcttgccaccagtggggactac
ctgcgcatttggagggtcagcgacacagaaacgcgtctcgaatgtttgttgaacaacaac
aagaactcagacttctgtgctcccctcacatcctttgactggaatgaggttgatcccaat
ctgctgggtacatccagcattgacaccacctgcactatctgggggttggagactggtcag
gtgttagggcgcgttaacctggtgtctgggcatgtgaagacccagctgattgctcatgac
aaagaggtatatgacatcgcgttcagtcgtgcaggaggcggtagagatatgtttgcctct
gtgggagccgatggatccgtccgcatgtttgacctccggcacctggagcacagcactatc
atctatgaagacccccagcaccatccgctgctccgcctctgctggaacaagcaggacccc
aactacttggccacaatggccatggatggcatggaggtggtcatcctggatgtacgtgtg
ccttgcactccggtggctcggctgaacaaccatcgtgcatgtgtcaacggcatcgcctgg
gcccctcactcgtcatgtcacatctgcactgcagccgacgaccaccaggctctgatctgg
gacatccagcagatgccacgcgccattgaggatcccatcctggcctacactgctgaaggg
gagatcaacaacgtgcagtgggcctccacgcagccggactggatcgccatctgctacaac
aactgcctggagatcctgcgtgtctaa
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