Perca flavescens (yellow perch): 114570314
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Entry
114570314 CDS
T07494
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
pflv03015
mRNA surveillance pathway
pflv03040
Spliceosome
pflv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114570314 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
114570314 (alyref)
03015 mRNA surveillance pathway
114570314 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114570314 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114570314 (alyref)
03041 Spliceosome [BR:
pflv03041
]
114570314 (alyref)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114570314 (alyref)
TREX complex
114570314 (alyref)
Spliceosome [BR:
pflv03041
]
Complex C
Other components
EJC/TREX
114570314 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114570314 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
114570314
NCBI-ProteinID:
XP_028456378
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All DBs
Position
15:7955519..7958652
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AA seq
270 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGGRGGGGPGRLGVSGGGFAGRGGGS
GPMRSRQNLSRGRGRPTPYSRPKQLPDKWQHDMFDNGFSGPVGGGGGAGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLD
GRPMNIQLVTSQIDTQRRPMQGLNRGGGGGMNRNRGGGFRGMQRGRGGRGAGGAGGRGRG
GRGGSGSKQQLSAEELDAQLDAYNARMDTS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaatggatatgtctctagacgacattatcaagcagaacaggcagcagaga
ggtggaggccgcggtggaagaggtcgaggccgcggaggctcaggtggcggccgaggagga
ggaggccctgggcgtcttggagtcagcggcggcggatttgcaggccgaggcggcgggtcc
ggccccatgaggagccgacagaatctgagccgcggtagaggcagaccaacgccttacagc
aggcctaaacagcttccagataagtggcagcatgacatgtttgacaacggcttcagtggc
ccagtcggaggtggcggaggagctggtgtggaaactggagggaagctcctcgtctccaat
ctcgactttggggtctcagatgctgacattcaggaactttttgctgaatttgggactctg
aaaaaggctgcagttcactatgaccgatcggggcggagcctgggaaccgcagatgtccac
tttgaaagaagggcagatgcccttaaggccatgaaacaatacaatggcatcccactggat
gggcggcctatgaacatacagctcgtcacatcacagattgacacacagaggcgacctatg
cagggtctgaacagaggcggtggaggaggcatgaacagaaatcgcgggggtggcttcaga
ggcatgcagagaggccgcggaggacgtggtgcaggcggtgccgggggaagaggtcggggt
ggccgcggcggtagtggtagcaagcagcagctgtcagcagaagaactcgacgcccagtta
gacgcctacaatgccaggatggacaccagctaa
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integrated database retrieval system