Perca flavescens (yellow perch): 114570421
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Entry
114570421 CDS
T07494
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04137
Mitophagy - animal
pflv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114570421
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114570421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114570421
03009 Ribosome biogenesis [BR:
pflv03009
]
114570421
04131 Membrane trafficking [BR:
pflv04131
]
114570421
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114570421
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
114570421
Ribosome biogenesis [BR:
pflv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
114570421
Membrane trafficking [BR:
pflv04131
]
SNARE
SNARE associated proteins
Others
114570421
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114570421
Exosome [BR:
pflv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114570421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
Vps4_C
AAA_14
RNA_helicase
NPHP3_N
AAA_28
ATPase_2
Parvo_NS1
Mg_chelatase
DUF815
nSTAND3
AAA_7
ATPase
IstB_IS21
AAA_18
ABC_tran
AAA_17
NACHT
AAA_24
TsaE
ResIII
Sigma54_activat
Viral_helicase1
NB-ARC
PhoH
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
114570421
NCBI-ProteinID:
XP_028456555
LinkDB
All DBs
Position
2:15965078..15975006
Genome browser
AA seq
808 aa
AA seq
DB search
MPGSGGADPKGEDFSTAILKQKHRPNRLIVDEALNEDSSIVSLSLIKTEELQLFRGDTVV
LRGRKCRQTVCIVLTDETCGHERIRMNRVTRNNLRVRLGDVISIHACPDIKYGKQIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPIHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEIMQIHTKNMKLSGDIDLERIAKETHGHVGADLAALCSEA
ALQAIRKKMTLIDLEDESIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEVPQVNWED
VGGLDQVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGGGDASGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRTAILN
ANLRKSPVARDVDLDYLSDITDGFSGADLTEICQRACKMAIREAIEAEIKAERQRQTRSG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
TRSGGQGSGSGSERPGVYREEGNDDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctctggaggagcagacccaaagggagaagatttctccactgccatcctgaaa
cagaaacacagaccgaacagactcattgtggacgaagctctcaatgaagacagcagcatt
gtcagcctgtcactgattaagacagaggagctgcagctcttccggggggacacggtggtg
ttgcgagggaggaaatgtcgccaaacagtgtgcatcgtcctgacagatgaaacctgtggg
catgagcgaatccgcatgaatcgtgtgacgcgcaacaatctgcgtgtccggcttggtgat
gtcatcagtattcatgcctgccctgatatcaagtatgggaagcagatccatgtcctccct
atagatgacaccatcgagggcctgacaggaaacctctttgatgttttcctcaaaccatat
tttctggaggcttaccggcccatacataaaggtgacatcttcttggtgagaggaagcatg
cgggcggtggagttcaaggtggtggagactgaccccagcccccactgcattgttgcccca
gacacagtcatctactgcgagggagagccaatcaaaagagaggatgaggaggagagcctt
aatgacatcggctacgacgacatcggaggctgtcggaagcagctggcccagattaaagag
atggtggagcttcctctcagacaccccggccttttcaaggctatcggtgttaagcccccc
agaggaatcctgctgtacggccctgcaggcacagggaagaccctggtggcccgggctgta
gccaacgaaactggtgcctttttctttctcatcaatggtccggagatcatgagtaagctg
gcgggagagtcagagagcaacctaagaaaggcgtttgaggaggcagagaaaaacgctcca
gccatcatctttattgatgagctggatgccatcgctcccaagagagagaagacccatggt
gaagtggagaggcgtatagtctcccagctcctgaccctgatggatggcctaaagcaaaga
gctcatgtagttgtcatggcagccacaaaccgaccaaacagtgtggaccctgctctgaga
cgctttggcaggtttgaccgggagattgacattggaatccctgattcgaccggcagactg
gagatcatgcagatccacaccaaaaacatgaaactctctggcgacatcgacttggagagg
attgccaaagagacccatggtcatgtaggcgccgacctggctgctctgtgctcagaagct
gctctgcaagccatccgcaagaagatgaccctcatagacctggaggacgaatccattgat
gctgacctgctcaactcactggctgtcaccatggatgacttccaatgggcgctgagtcag
agcaacccatcagctttgagagagactgttgcagaggtgcctcaggtgaactgggaggat
gtcggaggactggaccaggtcaagagagaactgcaagagctcgttcagtaccctgtcgag
tatccggacaagttcctgaagtttggtatgactccatctcgtggagtgttgttctacggc
cctccgggctgtgggaaaaccctgctggctaaggccatcgccaacgagtgccaagcaaac
tttatctccatcaaaggacctgagatgctgaccatgtggtttggagaatcggaggccaat
gtcagagatgtgtttgataaggccagacaggcagccccttgcatcttgtttttcgacgag
ttagactccattgccaaatctagaggaggcggaggtggggatgcgagtggtgcagctgac
agagtcatcaatcagatactcacagagatggacggcatgtcggacaaaaagaatgtcttc
attattggagccacaaacagaccagacatcatagactctgccatcctgcggccgggccgt
ttggaccagctcatctacatcccgctcccagacaaaccatctcgcactgcaatcctaaat
gccaacctccgcaagtcccctgtcgcacgagatgttgatctggactacctgtctgacatc
acagatgggttctccggagctgacctgacagagatctgccagcgggcttgtaaaatggcc
atccgtgaggccattgaggccgagatcaaggctgagcgtcagaggcaaaccagatcaggc
atccccatggatgaggactttgatccagtcccagagattaggaaggaccactttgaagag
gcgatgcgatttgctcgtcgctctgtcagtgacaatgacatccgcaaatatgaaatgttt
gctcaaactctgcagcagagcagaggatttggaaacttcaggttcccctctgctactggt
acccggtctggaggtcaggggtcaggctctgggtcagagaggccaggcgtgtacagagag
gaaggcaatgatgatctctatcagtga
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