Perca flavescens (yellow perch): 114570543
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Entry
114570543 CDS
T07494
Symbol
bdp1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114570543 (bdp1)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
114570543 (bdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
114570543
NCBI-ProteinID:
XP_028456670
LinkDB
All DBs
Position
16:25257240..25271291
Genome browser
AA seq
2512 aa
AA seq
DB search
MFRRSRFSIRPNVVTAGRTAAAPQEAPSANQEASETPKDVSESSSSTTTAVTDNKSVVTP
SEKPAAPGDGNDQNGEGTSSSAAVQRRKRFSIKPKVAPGRPSTLARTPKSPLKAVSETPI
EIPVSDLDKPNKSTLSGTIASPQRLQSPRRRRPSEDSKQLKTQPKSIIIPSDSSEPSAVP
TAKDFLEQIHLPTDSGKELESTSGSQVEEVPSRLPDKVPPSLPDKEAIEISKKAKNLVSS
KTGLSLSQPAFSLSRLLNDPSDLQRIAKAQKLRELLKQEMHKEKRIKRAKARVKEYTLDP
AKMTMRDLIRYLPLSNPMTSSLEDATRENEAVVPPSPVREDSPERAQEPVVLPKIASPRD
EAEAAAEAEAEEDADAEEEQDDAVMVPQVKVAEDGSLIIDEESLTVEVQRAKGPNPAQDR
DPIFERGSTTTYSSFRKGTYSKPWSSEETDMFFLAISMVGTDFSMICQLFPHRARSEIKN
KFKKEERENAWRIDKAFKERRKLDIEYFSKLLEKILEVQKTRKKLKSLAEKKSPKKKENK
KTKGKKASRKLSVVEEGDEEEQNEIPDLEEEGEKENDDLCNEGGTTVAKPQKKRKRKNKL
DASTKEPNDKKNKTGENEQDEAYIPGDTEAALPEDCPKSDMSEKTDNVNESKDNTIKPAK
LSRGRAPKPLLLLGRKWGKKPPSPSTKTNATASDKEDESEIDGASKEQVNKDPSPLKQAT
KRKSANDDISSGEEDVTVKPPRPTRYGRVPKPTKPLNYPGKEATHSSETTPASPAGSTAS
APMPKPKCTAKRGRSSKLQPAQESKKPKLVTLRASQSEYSDEEDEKQQEEEEVEEEHTAC
NSSNDSTAPVFVPASLRSPHPVISEVEETMEELDILANMPDVLGISQDVLCRDAFCERAQ
NEIGTAEPCEHQLDLLVDVIDFLSVENTEVSDDESYNEAAQTLLTIGNLAHLSQSAQNQI
ATQDDIKGTTPVSVNETSQHLEEEIACCSKPSAQEENSATLMSATSVHGGPETVTTVELQ
NCTTDTDAIPVIKSSVQRTGSDTDPTPQLQLSQESSKTNSPQTRRGRLTKVKPKPNLGQS
SRTAQSKSQPQTSTERTPEESHTVALDLFQATETLSAAEEIPKIADCSKKNLNVEISHIE
VKHTSASTDEVIISHVGTTESSCNNQVTSDSQTHTAVTESQIGQWSNNPVKESSDHSAPV
EELPVSQKEESEVASTSQTRKSRFQKVRPNLNLSQTSRTVRCKPQTTKENVEKDSNPTPN
PKFYEKSIAEVEAEPTCITSPEKPRLSPDPASDFIPSMHLGSTLTPTEELSTTEEKKTDV
GVVCQVESDTATSDQSASENQNLSEAQFEPRREQASRDTMLKSESIDEVLMSHVGTTESS
CNNPLTSDSAVTESQIGQESNIDSAPVQESSNYPASYVTRVEELPVSQKEDREVASTSQT
KKSRFQKVKPNLNLAQTPRAVRSKLQTTKGIGEKDSNATLKTMAKYEAEPTCITSPEKPS
HSPCTASTFTPTEELSTTDAKKRDIGVVGQLESGATTSHQTPTENQNLSKAPFEPSKEQA
TRDSTQTLESKDEKLSHVGTTESSCNNPLTSDSAVTESQVGQGSNIDSVQDSSDHPAPCV
RPVEELPASQKEKSKVVSTCRAIRGLLQKVKPILPQTSRTVRSKAQTTKDPFTPLQLPEI
HSSPTLTSESTDKIKAEVEAQPTCSITPPEKPSQLKSTGSLLVSVPSLELCSTHKSTEEL
CSTEEQKIDVGCRLDSKSEGSEQNVPQRSRRFPKVKHKPNLGSAPRTTFTKLPLKEVSKP
SEPCHMDTSLTFEQRPEDNNNAQTELELAETDSRTSTHCSLHTEPLSSTMLEGPAESEYR
SVLTNTVLTQSSEKATVEGETTGGKTSNNDVVAGPASQWDRKQGMSIRDTNTQPTDDPTA
VSDVHTSEDGSTESKIEFKPLTNTQSTSYPKISTQQPRSENDSETQSQDAVQHYSETTET
NQTAAQRTDDNQSTPTDSPSRTAPQTCRGQLIKPKPNLGRSSRPAHHQQIQKTKQAEADF
GTCSEGVDSSVCHKLVSERRPDIQEPVEGAIEQCSNQNPSPSDAGSSLGCLTQVIEQLSQ
DDPPPNVAGSSLGCVENVTQDASTSSTGGTKSHSSLNTILPDMLLQQEPLDADEQFFILS
LTEIPVCSLGEVVDSVPEPLPYLAVTDASVEQQSVPAESLAAAGDGLLSNVAVPVFMGDS
GETGLINAIDIGPDPAADIGSIMENPVDPHEVTAEKNDETEIPPAKQRLMDTHRREPAKL
QVKPNTTKRKQASKTLAAKEAESITIQTNTTQHSELPGLSVQPNVFDDDVTESQKGSDDH
VDVKKETLTGGEDPEDSSSGAQTTRTRRASSRNREAKGSLSLTSETNNAAPASDSPPGKE
APKGRKVKTPRAAGKPSTPAPGASTSYDVAPTFSQTQPTQETRSTSSTTSPTQTEVDAEQ
TSEHSPLCSDTTRSTSLCPAEVSASQQSVESSSIEEEPTIVSQYFLSDILQK
NT seq
7539 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgccggtcaagatttagtattcggcctaatgttgttacggcagggagaacagca
gcagcacctcaggaagccccttcagcaaatcaggaggccagtgaaacccccaaggacgtc
agtgagagcagcagcagcactactactgctgtgacagataacaagtctgttgtgacccca
tcagaaaaacctgcagccccaggggatggtaatgaccaaaatggggaaggtaccagctcc
tcagcagcagtccagagaaggaagcgtttttccatcaagcctaaagtggccccaggtcgg
ccctccacccttgctcggacgccgaaatcccctctcaaggcagtctctgaaactcctatt
gaaatccctgtctcagaccttgacaagccaaataaatctaccctgtctgggactatagca
tcccctcagagactccagtccccaaggcgacggaggccttcagaagacagcaagcaactc
aaaacgcaacctaaatccatcatcatcccttctgacagttcagaaccttcagctgttcct
acagctaaggactttctagaacaaatccatctgccgacagacagtggcaaagaattggaa
agcacttcaggcagtcaagttgaagaagttccttcaagactaccggataaagtccccccc
tctctcccagacaaagaagctattgagatatcaaagaaagccaagaatctagtgtcatct
aagactgggctttcactgtcacaaccagcgttctccttgagtaggctcctgaatgaccca
tcagacttacagaggatagcaaaggcccaaaaactcagagagttgctcaaacaggagatg
cacaaagaaaagagaatcaagagagctaaggcacgtgtaaaggaatataccctagatcct
gccaaaatgaccatgagggaccttatccgttatctaccactgtctaaccccatgacatct
agtttagaagacgcaactcgagagaatgaggcggtggtcccaccttctccagtaagagaa
gattccccagagagagcacaggaacctgtggtcctccctaaaatagcaagcccgagggac
gaggcagaggcagcggcagaggctgaggcggaggaagatgctgatgcagaggaagagcag
gatgatgccgtaatggttcctcaagtcaaagtagcagaggatggctcactgatcattgat
gaagaaagcttgacagtggaagtccagcgagccaaagggccaaacccagcacaggatcga
gaccctatctttgagcgtggctccactacaacttactcgagcttcaggaaagggacctat
tcgaaaccctggtccagtgaagagacagacatgttcttcttggcaattagcatggtgggg
acagacttttccatgatttgtcagctgtttcctcacagagctcgatcagagataaagaac
aaatttaaaaaagaagagcgagagaatgcctggaggattgacaaagctttcaaagagagg
cgcaaactggacatagagtatttttctaagctgctagagaagattctggaagttcaaaaa
acccggaagaaactaaagtcacttgctgagaagaaatctcccaagaagaaagaaaataaa
aagacaaagggcaaaaaagcttcaaggaagctgagtgtcgtggaggaaggagatgaggaa
gagcagaatgaaattcctgacttggaggaggagggagagaaagagaatgacgacctctgt
aatgagggaggaaccactgttgctaaacctcagaagaaacgtaaaagaaagaataaactg
gatgcttcgactaaggaaccaaatgacaagaaaaataaaactggtgaaaatgaacaagat
gaggcctacatacccggagacactgaggcagcacttcctgaggactgtccaaaatcagac
atgtctgaaaagactgacaatgtgaatgagtccaaggacaacactatcaagccagctaaa
ctctcccgaggcagagcaccaaaaccactactgcttttgggccggaagtggggtaaaaag
cccccatcaccctccacaaagaccaatgctacagcatcagataaagaggatgagagtgag
attgatggggcctctaaagagcaggtaaataaagatccatcacccttaaagcaagccact
aagaggaagtcagccaatgatgacatttcctctggtgaagaggatgtcaccgttaaacct
ccgagacctaccaggtatgggagagtgcctaaacccaccaagcccttgaattaccctggg
aaagaggctacacactcatctgaaaccactcctgcctcaccagctgggtccactgcttct
gctcccatgcctaaacccaaatgcacagctaagaggggacgatcatcaaagctacaacca
gcccaagagtccaaaaagcctaaactagtcaccctccgggcttctcagtcagaatacagt
gatgaggaggatgaaaagcagcaagaagaggaagaggtggaggaggagcacactgcatgt
aactccagtaatgacagcactgcccctgtgtttgtgcctgccagcctgcgctccccacat
cctgtgatttcagaagtggaagagacaatggaggagcttgatatcttggccaatatgcct
gatgtgttgggcatctcccaagatgtactgtgccgtgatgccttttgcgagcgggcacaa
aatgagataggcacagctgaaccctgtgaacatcagctggatctgcttgttgatgttatc
gacttcctttctgtagaaaacacagaagtatctgatgatgagagctacaacgaggctgct
caaaccctgttgaccatcggcaacctggctcacctctctcagtcagcacagaatcaaata
gccactcaagatgacataaaagggacaacaccagtcagtgtgaatgaaaccagccaacac
ctggaagaagagattgcctgctgctcaaagccttctgcacaggaggaaaacagtgccact
cttatgtctgcaacttctgttcatggaggcccagaaactgttaccactgtggagctacaa
aactgcacaacagacactgatgccatccctgttattaaatccagtgttcagaggacaggt
tctgatacggaccctacccctcaattgcaattaagtcaagagagctcaaagacaaattct
ccacaaaccagaagaggacgcttaaccaaggtaaaaccaaaacctaacctaggccaatcc
tcaagaactgctcagtcaaaatcccaaccacagacttcaacagaaaggacacctgaagag
agccacacagtagctcttgacctttttcaagccactgagacactatccgctgcagaggaa
atccctaaaatagcagactgtagtaaaaaaaatttaaatgttgaaatttctcatattgaa
gtcaaacatacatctgcatctacagatgaagtaattatttctcatgttgggacaactgag
agtagctgtaataatcaggtgacatctgactcacagactcacacagcagtcacagaatca
cagattggacaatggtcaaacaacccagtcaaagagagcagcgaccattctgcaccggta
gaagagttacctgtcagtcagaaagaagaaagtgaagtcgcatctactagccagaccagg
aagagtcgattccagaaagtcagacccaatctcaacctatcacagacgtcaaggactgta
cgttgtaaacctcaaaccacaaaagaaaatgtagagaaagactccaacccaactccaaac
cccaaattctatgaaaaatcaatagcagaggttgaagcggagccaacttgcatcacctct
cctgaaaaaccaagattaagtcctgatcccgcttcagattttataccatcaatgcattta
gggtctactcttacacccacagaggaactgtctacaactgaggagaaaaagacagatgtt
ggagttgtttgtcaggttgaatccgatacagcaacatcagatcaaagtgcctcagaaaac
cagaacctctctgaagctcagtttgaacccaggagggaacaggcctccagagacacaatg
ctaaaatctgagtccatagatgaagtacttatgtctcatgttgggacaacagaaagtagt
tgtaataatccgcttacatctgactcagcagtcacagaatcgcagattggacaagagtca
aacatagactctgccccagtccaagagagcagcaactatcctgcttcatatgttacacgt
gtagaagagttacctgtcagtcagaaagaagatagagaagtcgcatctactagccagacc
aaaaagagtcgattccagaaagtaaaacccaatctcaacctagcacagacaccaagggct
gtacgttctaaacttcaaacaacaaaaggcatcggcgagaaagactccaacgcaactcta
aaaacgatggcaaagtatgaagcagagccaacttgcatcacctctcctgaaaaaccaagt
cacagtccctgtactgcttctacttttacacccacagaggaactgtctacaactgatgca
aaaaagagagacattggagttgttggtcagttagaatcaggtgcaacaacatcacatcag
actcccacagaaaaccagaacctttctaaagccccttttgaacccagtaaggaacaggcc
accagagattcaacgcaaacattggagtccaaagatgaaaaactgtctcatgttgggaca
actgagagtagctgtaataatccgctgacatctgactccgcagtcacagaatcccaagtt
ggacaagggtcaaacatagactctgtccaagatagcagcgaccatcctgctccatgtgtt
cgacctgtagaagagttacctgccagtcagaaagaaaagagtaaagtcgtatctacttgc
cgggctataagaggcttattacaaaaagtcaaacccatcttaccacagacatcaagaact
gtgcggtctaaggcccaaaccacaaaagaccctttcactcccttgcaactcccggagata
cactcgagccctactttaacgtctgaatccactgacaagataaaagcagaggtagaagca
caaccaacttgcagtatcacccctcctgaaaaaccaagccagcttaaaagtactggctct
ctcttagtgtcagtaccatcattggaattatgttctactcataaaagcacagaggaatta
tgttcaactgaggagcaaaagatagatgttggatgcagactagactccaagtcagagggc
tcagaacaaaatgttcctcaaagaagtcgacgctttccaaaggtcaaacacaaacccaat
ttaggatccgctcctcgaactacattcacaaaactgccgttaaaagaggtcagtaaaccc
tcagaaccgtgccatatggacacttctttaacctttgaacaacggcctgaggacaataac
aatgcacaaacagaactggaactcgcagagacagacagcaggacatcaacacattgttca
ttacatacagaacctctcagctcaacaatgttggaaggacctgctgagtcagagtatcgg
tctgtgttgacaaacacagttctgactcaaagtagtgaaaaagccacagttgaaggagaa
accacagggggcaaaacgtcaaataatgatgtggtggctggacctgcttcacaatgggac
cgcaaacagggcatgtccattagagatacaaatacccaaccaaccgatgatccaactgcc
gtttcagatgtccatacttcagaagatggttcaacagagtcaaaaattgaatttaaaccc
ctgactaacacacagtccacatcatatccaaaaataagcactcagcagccacgttcagag
aatgactctgagacgcaaagtcaagatgcagtccaacattattctgaaaccacggaaact
aatcaaacagctgcccaaaggactgatgataatcagtcaacgccaactgactctccctca
agaacagctccccagacttgtagaggccagcttattaaaccaaaacccaacctgggacgc
agcagccgacctgcacaccatcaacaaatccagaaaacaaaacaagcagaagcagatttt
ggtacttgctcagagggcgtggattcttcggtttgccacaaacttgtgtctgaacgtcga
cctgacatccaggaaccagtagagggagcgattgaacagtgtagtaaccaaaatccctct
ccaagtgatgctgggtcttcgctgggctgcttgacacaagttattgagcaactgagtcaa
gatgacccccctccaaatgttgctggatcctctctgggttgtgtagaaaatgttactcag
gatgcatcaacatcaagtacaggagggactaaaagtcattcaagtctcaatacaatattg
ccagacatgctgttgcagcaggagcctttagatgcagatgagcagttcttcatcctctct
ctgactgagatcccagtctgctcattaggggaggttgtggacagtgtgcctgagcccctc
ccttatcttgctgtaacagatgcgtcagtagagcaacagagtgttcccgcagagagtttg
gcagcagctggcgacgggctcctgtctaatgtcgctgtgcctgtgttcatgggggacagt
ggtgagacaggcctcatcaatgcaatagatattgggcctgacccagctgcagatataggt
tcgatcatggagaatccagtggatccacatgaagtgactgcagagaaaaatgatgagact
gaaattccccctgcaaagcagagactaatggacactcatagaagagaaccagccaaactg
caggttaagcccaatactaccaagaggaaacaagccagcaagaccctcgctgccaaggaa
gcagagtcgatcaccattcagacaaacaccactcagcactcagagcttcctgggctttct
gtgcagccaaacgtctttgatgacgatgttactgaatcacagaaaggaagtgatgatcat
gtggacgttaaaaaggagactctgacaggtggtgaggaccctgaggatagcagctcagga
gcacaaactacaaggactaggcgggctagtagtcggaatagagaagccaaaggctccctt
tccctaacttctgagacgaacaatgctgcccctgcaagcgattctccacctggtaaagag
gctcccaagggccgtaaggtcaaaactccacgtgcagcaggaaaaccatctaccccagca
cctggtgcctcaacatcgtatgatgtcgctcccacattcagtcaaacacagccgacccag
gaaacccgctcaacatcttctaccacatcaccaacacaaacagaagtggacgctgaacag
acttctgagcacagcccactatgctcagacacaactcgtagcacttctctgtgtcctgct
gaggtctcagcttctcagcagagtgtggagagcagctctatagaggaggagcccaccatt
gtgtctcagtacttcttaagtgacattttacagaagtga
DBGET
integrated database retrieval system
