Perca flavescens (yellow perch): 114570621
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Entry
114570621 CDS
T07494
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114570621 (vldlr)
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114570621 (vldlr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
114570621
NCBI-ProteinID:
XP_028456789
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Position
16:complement(6855523..6915630)
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AA seq
879 aa
AA seq
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MQPASAQLATVRTLKEMVTSTPGILLLPMLICLQHCINVHGTKTECEASQFQCGNGRCIP
SVWQCDGDEDCTDGSDENSCVRKTCVEVDFVCRNGQCVPKRWHCDGEPDCEDGSDESVEI
CHMRTCRVNEFSCGAGSTQCIPVFWKCDGEKDCDNGEDEVNCGNITCAPNEFTCASGRCI
SRNFVCNGEDDCGDSSDEVECAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPS
RCGRHPTPPAKCSSSEMQCRSGECIHKKWRCDGDPDCKDGSDEANCPVRSCVPDQFKCDD
GNCILGSRQCNGIRDCADGSDEVNCKNLTQCNGPEKFKCRSGECIEMSKVCNKARDCPDW
SDEPIKECNLNECLMNNGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECVNPGICS
QICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPSLIFTNRRDIRRLGLERKEYTQIVEQ
QRNTVALDADYNQQMIFWADVGQRAIYSTVLDKRGEVGIHSKVIQNIQTPVGIAVDWIYK
HLYWSDLGTKTISVANFNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSG
MNGVDRQVLVATDIQWPNGISLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSLDYLA
HPFALTVFEDRVFWTDGEKQAIFGANKFSGSDVVTLASNLNDPQDIIVYHELIQLSGPNW
CAEKGANGGCSYMCLPAPQINKHSPKYTCVCPEGQELAADGLRCRPEHSTKGPSKEDGKA
LIQPPPEAMSTSIQVNSTARGSAAAWAILPVLLLAMAAAGGYLMWRNWQLRNQKSMNFDN
PVYLKTTEEDLNIDITRHGANVGHTYPAISIVSTDDDLS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccgcgagcgctcagctagcaaccgtgcgtacactgaaagagatggtcacgtcc
acaccggggatcctcttgctgcccatgctaatatgtctccagcactgcattaacgtccac
ggtactaagacagaatgtgaggccagccagtttcagtgtggaaacggtcgctgcatcccg
tccgtctggcagtgtgacggagacgaggactgcaccgacggcagtgacgagaactcctgt
gttagaaagacttgtgttgaggtggactttgtttgtcgcaacggccaatgtgtcccgaag
cgatggcactgtgatggggagcctgactgcgaggatgggtccgacgaaagcgtagaaatc
tgccacatgaggacatgtcgtgtgaacgagtttagctgcggagcgggctccactcagtgt
atccccgtcttctggaaatgtgacggagagaaggactgtgacaatggagaggacgaggtc
aactgtggtaacatcacctgtgctccaaatgagttcacgtgcgccagtggccgctgcatc
tcccgtaactttgtgtgtaatggcgaggacgactgtggtgacagctccgatgaggtggag
tgtgcgccgtcttcctgcggccccagtgagttccagtgtggaaactcatcgtgcatcccg
gccagctgggtgtgtgacgacgacgttgactgccaggaccagtccgatgagtctccgtct
cgttgcggccgtcacccgacgccgcctgcaaagtgttcatccagtgagatgcagtgtcgc
tcaggagagtgtattcacaagaagtggaggtgtgacggagacccagactgcaaggacggc
agcgacgaagccaactgtcctgtacgctcgtgtgttccggatcagttcaaatgtgatgat
ggaaactgtatcctgggcagcagacagtgtaacggcatcagagactgcgccgatggatca
gatgaagtcaactgcaaaaacctgacccagtgtaacggaccagagaagttcaagtgtcgc
agcggggagtgtatcgagatgagcaaagtgtgcaacaaggcccgagactgtcccgactgg
agcgacgaacccatcaaggaatgcaatctaaacgagtgtctcatgaacaacggcggctgc
tctcacatttgcaaagacatggtgatcggctttgagtgtgactgcacgccgggacttcag
ctcatagaccacaagacctgcggagacatcaatgagtgtgtgaaccccggcatctgcagt
cagatctgcatcaacctgaagggtgggtacaagtgtgaatgccacaacggctaccagatg
gatccgaccaccggcgtctgcaaggctgtcggtaaggagccctccctgatcttcaccaac
cgccgggacatccgtcgcctgggtctggagaggaaggagtacactcagattgtggagcag
cagaggaacacagtggctctggatgccgactataaccagcagatgatcttctgggctgac
gtgggccagagggccatttatagcactgtgctggacaaacgaggggaagtcggcatccac
agcaaagtgatacagaacatccagactcctgtgggaatcgccgtggactggatctataag
cacttgtactggtctgatctcgggaccaaaaccatttctgtagccaacttcaacggaacc
aagcagaaagttctgttcaacagaggcctcaaagaaccggcatccatcgcagtagatccg
ctgtctgggttcctgtactggtctgactggggcgagccagcaaagattgagaaatctggt
atgaacggagtggaccgacaggttctggtggcgactgatatccagtggcctaatggaatc
tccctggatctgatcaaaggccggttgtactgggttgactctaagctgcacatgctctgt
agtgttgacctgaacggagacaaccggaagaaagtactccagtctctggactacctggct
catccctttgctctcacggtttttgaggatagagtcttctggacagatggtgaaaaacaa
gccatctttggcgcaaacaagttctcaggctcggacgtggtgacgctggccagcaacctg
aatgacccccaggacatcatagtgtaccatgagctgatccagctgtcgggtcctaactgg
tgtgcagagaaaggtgcaaacggaggctgtagctacatgtgtctgcctgcgccgcaaatc
aacaaacactcccccaaatacacctgtgtgtgtccagagggacaggagctggctgctgac
ggcttacgctgcagacctgaacattctaccaaaggtccctcaaaggaggatggaaaagcc
ttgatacagccccccccagaagccatgagcacatccatccaggtgaactccacagccaga
gggtctgctgctgcctgggccatacttcctgtcttgctgctggcgatggcagcggcaggc
ggctacctgatgtggagaaactggcagctgaggaaccagaagagcatgaactttgacaac
cccgtctacctgaagaccaccgaagaagacctcaacatcgacatcacccggcacggcgcc
aacgtgggtcacacctaccctgcaatttcgatagtgagcacagatgacgatttatcgtga
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