Perca flavescens (yellow perch): 114570888
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Entry
114570888 CDS
T07494
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114570888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pflv04990
]
114570888
Domain-containing proteins not elsewhere classified [BR:
pflv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
114570888
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
114570888
NCBI-ProteinID:
XP_028457300
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All DBs
Position
16:17811273..17851765
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AA seq
610 aa
AA seq
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MSSSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDEGKAAKAKMNVGDLILSINGISTD
SMNHLEAQNKIKACTGNLSLTLRRPSSAPKDAVPKDEPQEIIKPVPITHPAPSTTYTKPS
SQPSPAYNKTARPFGGGSSLVTASSPAAPSIPSQSSAFKPAAPSQPAQPPFLLKSTIPAP
DSAPANSLPRPSPSRSTFPSPSASSSSSNSSSPARVTAPSSNPNVPQPSVYNTPINLYSN
TNACEVVMGQRRGLLESQGLSEHFNGKPNVEPEGHASPLSDASKKRLIEDTEDWHPRTGT
SQSRSFRILAQITGTENEQAQENSGKTEAVDKTTPAVHTMPAAKTFSKSTASPRNGNVFP
APTFKSPAAQKKPSFQPGGPPGFPKGGAAPSFGKVTNPAPKGPDRPTPQPHPQDLNSLVQ
RAEHIPAGTRTPMCNKCNTVIRGPFLVAMGMSWHPEEFNCAHCHSSVVEHGFVEERGQVY
CEHCYEQFFAPTCACCHQKILGEVMNALKQTWHVSCFICVACKQPIRGNTFHMEDGQPYC
EKDYYNLFGSNCHGCDFPIEAGDRFLEALGFTWHDTCFVCAVCSTSLEGQAFFSKKDKPL
CKKHAHTVNI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagtgtctccctggctggccctgccccctggggcttcagactgcag
ggagggaaggacttctgtctgcccctcaccatctcacggttgactgatgaaggcaaggca
gccaaagccaagatgaatgttggagacctcattctgtccattaatggtatttccacagac
agcatgaatcacctagaggcacagaacaagattaaggcctgcacgggcaatctcagcctc
actctacgaagaccctccagtgcccctaaagatgccgtgcctaaggatgaacctcaagaa
atcattaagcctgtcccaatcactcaccctgccccaagcaccacatacactaagccatca
agtcagcccagtcctgcatacaacaagacagcccggccttttggcggtggcagcagtttg
gtcacagcttcttccccggctgccccctccattccctcacaatcatccgctttcaagcca
gctgccccttctcaaccagcacagcctccatttctgctgaagtcaaccattcctgccccg
gactcagctccagccaactcacttcccaggcccagccctagtcgctccaccttcccctcc
ccgtctgcctcttcctcttcatctaactcatcctctccagccagagtgacagccccctcc
tccaatcctaatgtcccacagccctctgtctataatacacctatcaacctctactccaat
actaatgcttgtgaggtggtcatgggacagagacgaggtcttttggagagccaggggctg
tcggagcacttcaacgggaaacctaatgtggagcccgagggtcatgcatccccactgagt
gacgccagcaagaagcgtctgatcgaggacacggaggactggcacccacgcaccggcacc
tcccagtcccgttccttccgtatcctggctcagatcacgggcactgaaaatgagcaagct
caagagaacagtggaaagactgaggcagttgacaaaaccactcccgctgttcacaccatg
cctgcagcaaaaacattttccaaatctacagcatcacccaggaatggcaacgtcttccct
gctcccacgttcaagagcccagcagcccagaagaaaccttccttccagcctggagggcca
ccaggttttcctaagggtggagcagctccttcatttggcaaagttaccaaccctgcaccc
aaaggtccagaccgccccaccccacagccacatccacaggacctcaactctctggtgcag
cgggcggagcacatcccagccgggacacgcaccccaatgtgcaacaagtgcaacactgtc
atcaggggcccattcctcgtggccatgggcatgtcatggcaccccgaggaattcaactgt
gctcactgccactcctccgtggtagagcatggatttgtggaggagaggggccaggtgtac
tgcgaacattgctatgagcagttctttgctcccacctgcgcctgctgccaccagaagatt
ctgggggaagtcatgaatgccctgaaacagacctggcatgtgtcctgtttcatctgtgtc
gcctgcaaacagccaatcaggggcaacacctttcacatggaggatggacagccatactgt
gaaaaagactactacaacctgtttgggtccaactgccacggctgtgacttccccatcgag
gcaggggacaggttcctggaagctctaggattcacctggcatgacacctgctttgtgtgt
gcggtctgctctactagtctggaaggtcaggcgttcttctccaaaaaagacaagcctttg
tgcaagaaacatgcccacactgttaacatctga
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