KEGG   Perca flavescens (yellow perch): 114570892
Entry
114570892         CDS       T07494                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pflv  Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pflv03041]
    114570892
Spliceosome [BR:pflv03041]
 Complex B
  Other components
   Complex B specific factors
    114570892
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd LisH_TPL Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_SPT8 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_IP5PC_F TFIIIC_delta Beta-prop_WDR11_2nd WD_LRWD1 VPS8_N WDR54 PD40 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 114570892
NCBI-ProteinID: XP_028457314
LinkDB
Position
2:complement(25930350..25938394)
AA seq 511 aa
MAVEMEPADVILLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKSGHWDSVL
LAIKSLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYIHLENL
LTCSYFDPREAYLKGSSKEKRRRAIAEALVREVSVVPPSRLMGLLGQVGSMRIQQYPGHV
FPDTTIETSGNKDKHVEKESFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEV
WNFNTGKISKDLKYQAQESFMMMDDAVLCMCFSQDTDLLATGAQNGKIKVWNIQSGLCLC
RFDHAHNKGVTCVSFSKDNNQLLSASFNKTIRIHELRSGNLLKELNGHSSFVNDASFTHD
GFHIISASSDGTVKIWNTKSCECIHTFKSLSRTPEVPVNNVIPLPQNPEHFVICNHSNTV
VIMSMHGQTVKTFSSDRKERADFVCCTLSPHGEWIYCVGEDLVLYCFNYTTGRLEKTLTV
HEKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctgtggagatggagcctgccgatgtgatcctcctgataatgcagtacctcaaggag
aacaacctctacagaacactgaccaccttacaggaggaaaccaccgtctcgctcaacacg
gtggaaagcatcgacagcttcatcgcagatataaagagcggccactgggactccgtccta
ctggccatcaagtccctcaagttgcccgacaacacactcattgacctttacgagcaggtt
gtaatggagctcattgaaatgagggaggtgggagcagcacgctcactcctcagacaaact
gacccgatgatcatgttgaagcagacgcagccagagaggtacatccatttggagaacctg
ctaacatgctcctactttgaccctcgtgaggcgtacctgaaaggcagcagcaaggagaag
cggcgcagggccatagccgaggcgctggtgagggaggtcagcgtggtgcccccttctcgc
ctcatggggctcctgggacaagttggctctatgagaatacagcagtatccaggtcacgtc
ttccctgacacgaccatcgaaacatctggcaacaaggacaaacatgtggagaaggagagc
tttccgacacagctgtaccgccacatcaagtttgggcggcggtctcatgtggagtgtgcc
cgtttctctcctgatggcaagtacttaatcactggatcggtggacgggttcatcgaggtc
tggaactttaacactggaaaaattagtaaggatttaaagtaccaggcccaagagagcttc
atgatgatggatgatgctgtgttgtgtatgtgcttcagtcaggacacagatctactggca
actggagctcagaatggcaaaataaaggtgtggaatattcagagtggcttgtgcctgtgc
aggttcgatcatgcccacaacaaaggtgtgacttgtgtaagcttctccaaggacaacaac
cagctcctcagtgcctcctttaacaagaccatcagaatccatgaattgaggtcaggcaat
ttgctaaaggagttaaacggccattcatcgtttgtaaatgatgcatctttcactcacgat
ggatttcacatcatcagtgcctcctctgatggcacagttaagatttggaatacaaaatcc
tgcgagtgcatccacactttcaaatctctgtcccggacaccagaagtccctgtcaacaac
gtgattcctctcccccaaaatccagagcactttgtgatttgcaaccactccaacacggtg
gtcatcatgagcatgcacggtcagactgtgaagaccttcagctcagatagaaaggaaagg
gccgactttgtgtgctgcaccctgtcgccccacggggagtggatttactgtgtgggagag
gacttggtgctgtactgcttcaactatacgacaggaaggctggagaaaacgctgaccgta
cacgagaaagatgtcattggcattgctcaccacccacatgagaatctaattgccacatac
agcgaggacggcctcctgaggttatggaaaccttga

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