Perca flavescens (yellow perch): 114570898
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Entry
114570898 CDS
T07494
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180-like isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114570898
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114570898
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114570898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
Yippee-Mis18
zf-C3HC4_4
E3_UbLigase_R4
Motif
Other DBs
NCBI-GeneID:
114570898
NCBI-ProteinID:
XP_028457321
LinkDB
All DBs
Position
16:7200101..7211857
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AA seq
525 aa
AA seq
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MLRCRRCRKGIIDSTCLSMVEATDESSAAACSIWHVDVDTLPEWILTSVHQAQWTAGKLN
CQNCGARLGGFNFTNRGECPCGRDATVHLNRSRVDRDHKHYFIVVQPRRTRPENERAATL
TDGPPSGDRRPEFNRTALDGVQLNCAAVMSHVGPVEASNSPTDSDTPQSFSFSPLYCISH
RRRCSLEDDSAVGACFCPVSPAVTSAVESMRTGTHGSTRPPVPHLASQRLDAASVDAAAG
RRFVSGRTRRSRLGGRPLRTAEEEESSPETTAVHQGVSASARLSRRGRSFSDSAAEQDQE
VSPEALAASPASNRLSKREKNRLKSLRRKQRRRERWLLSQLEQAEGVSGSQMDREEEEED
REGLTCAVCLELYFSPYSCQPCGHVFCEPCLRTIAKNRPTNTPCPLCRALISHSNPHHEL
NETAKTFFPKVYNARKQNFQSALCAKWPLPSCRKRFRTFWGEPRQAAAARRRWHFVHGGF
TLNALDFTDVRGWLFDIGLVIVYIHSVNWILAFLFLCFLMYYFFF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcaggaggtgtcggaaaggcatcatagactccacttgtttatcgatggtt
gaggccacagatgaaagctcagctgctgcttgcagtatttggcacgtggatgtggacaca
ctgccggagtggatcctcacctcagttcaccaggcccagtggactgcaggaaaactgaac
tgccagaactgcggcgctcgtttgggcggcttcaactttactaaccgcggcgagtgcccc
tgcggccgagacgccaccgtccacctcaacagaagccgcgtggatcgcgaccacaaacac
tacttcatcgtcgtccagccgaggaggacgaggcccgagaacgagcgggccgctacgctg
accgacggccctccgagcggcgatcggaggccggagtttaacaggacggcgctggacggc
gtgcagctcaactgtgccgctgtgatgtcgcacgtcggccccgtggaggcctccaactcc
ccgactgacagcgacaccccccagtcgttctctttcagtcctctgtactgcatctctcat
aggagacgctgcagtttggaagacgattccgccgtcggggcgtgtttttgccccgtgagc
cctgcagtcacgtctgccgtcgagagcatgaggacggggacccacgggtccacgcggcca
cccgtcccgcatctcgcaagtcagcggcttgacgccgcctcagtcgacgccgccgccggc
cgccggtttgtttctggaaggacacggcggtcacgtctgggcgggcggccgctgcggacg
gccgaggaggaggagtcctctccagagaccacggccgtccaccagggagtgtctgcttca
gcccggctgtcccgcagagggaggtccttctcggacagcgcagccgagcaggaccaggag
gtgtcgcctgaagccctcgcggcctccccagcctcaaacagactgagcaagagagagaag
aaccggctgaagagtctccggaggaaacagaggaggagagagcgatggctgctcagccag
ctggagcaggctgagggtgtgagcggttcacagatggacagggaggaggaggaggaggac
agagagggccttacctgtgccgtgtgtctggagctttacttcagcccgtacagctgtcag
ccctgcggtcacgtcttctgcgagccgtgtctccgcacaatcgccaagaaccggccgaca
aacacaccctgccctctctgccgcgccctcatctcacacagcaacccgcaccacgagctc
aacgaaaccgcgaagaccttcttcccgaaggtgtacaacgcccgcaagcagaacttccag
agtgctttgtgtgcaaaatggcctctgcccagctgtcgcaagcgcttccgtaccttctgg
ggagagccgaggcaggcagcggcggcgaggagacgctggcactttgtccacggaggtttc
acgctgaatgctttggacttcaccgacgtgcgcggctggctctttgacatcggcctggtc
atcgtctacatccactcagtcaactggatcctggctttcctgttcctctgcttccttatg
tactacttcttcttttga
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