Perca flavescens (yellow perch): 114570982
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Entry
114570982 CDS
T07494
Symbol
rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03320
PPAR signaling pathway
pflv04148
Efferocytosis
pflv04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114570982 (rxra)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114570982 (rxra)
03320 PPAR signaling pathway
114570982 (rxra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114570982 (rxra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pflv03310
]
114570982 (rxra)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
114570982 (rxra)
Nuclear receptors [BR:
pflv03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
114570982 (rxra)
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Ortholog
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GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
114570982
NCBI-ProteinID:
XP_028457490
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Position
16:complement(10362469..10477683)
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AA seq
504 aa
AA seq
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METKPFLSLGFLKPQCSLAPPMQRGRSGEACSCFSGMCPLHQRRLSSDSSGHLTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLASPFSVISSPMGPHSMNSPGMGY
GPSVSPQMFQLNSPMNSVSSTEDIKPPLGLNGVMKVPAQPSGTILSLTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKRE
VLLHAAVQEERQRAKERNENEVESTSCANEDMPVEKILEAEQAVEPKTETYIETNLGVPS
NSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSI
TIKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP
DSKGLSNPGEVEALREKVYASLEAYCKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccgttcctgtcattggggttcctgaagccccagtgctcgttggctcct
cccatgcagcgaggccgctcgggcgaggcttgttcctgtttcagcggcatgtgtcccctc
catcagcgccgcctatcctcagactcgtcggggcacttgacgtcctcgcccctgggctca
cccacatcccaccggggaatgcacccgtctctgctcagtccgacgtccatggggccctcc
ggctctcttcactctcccatcagcacgctgagttcgcccatgaacggcctggcctccccc
ttctccgtcatcagctcgcccatgggtccccactccatgaactcgcccggcatgggctac
ggccccagcgtcagcccccagatgttccagctgaactctccgatgaactcggtcagcagc
acggaggacattaagcccccgctgggcctcaacggtgtgatgaaggtgcccgcccagccc
tcaggcaccatcctgtcgctcaccaaacacatctgcgccatctgtggtgaccgctcctca
ggtaaacactatggagtatacagctgtgagggctgcaaaggttttttcaaaaggacggtc
cgcaaagacctgagctacacctgtcgcgacaacaaggactgtgtcattgacaagcgccag
aggaatcgctgccagtactgccgctaccagaagtgtttagccatgggcatgaagagagaa
gttttgttacatgcagccgttcaggaggagcgccagcgagccaaggagaggaatgagaat
gaggtggagtccaccagctgcgccaacgaggatatgcctgtggagaagattctggaggcg
gagcaggcggtggaacccaaaaccgagacgtacatagagaccaacctcggggtgccatcc
aactcgcccaacgacccagtgacaaatatctgtcaggcggctgacaaacagctctttact
ttggtggagtgggccaagaggatcccccacttctctgagctgccactggacgaccaggtc
atccttctacgagcaggttggaatgaacttctcatcgcatcattttcgcaccgttcgata
actattaaagacgggatcctgttggcgaccgggctgcacgtccaccgcaacagcgcccat
agtgctggagtgggagccatctttgacagagtgctcacagaactggtgtcaaagatgagg
gacatgcagatggataagacagaactggggtgccttcgagctatagtcctattcaaccca
gactctaaaggtctgtccaatccaggtgaggtagaagctctgagagaaaaagtgtacgcg
tctttagaggcctactgcaaacagaagtaccccgaccagcctggcagatttgccaaactg
ttgctgcggttaccagcgctgcgctccatcggcctcaagtgtctggagcacttgttcttc
ttcaagctcatcggcgacacgcccatcgacaccttcctcatggagatgctagaagccccc
catcaaatgacataa
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