Perca flavescens (yellow perch): 114571002
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Entry
114571002 CDS
T07494
Symbol
whrn
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pflv03037
]
114571002 (whrn)
Cilium and associated proteins [BR:
pflv03037
]
Primary cilia and associated proteins
USH complex and associated proteins
114571002 (whrn)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
114571002
NCBI-ProteinID:
XP_028457537
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All DBs
Position
16:8637294..8845129
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AA seq
967 aa
AA seq
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MSSTDLERMSLSSSANSVASSARTLSANVRKLHNALNLLLNDFEREQFIHCLNVYHSKRN
VYDLVQTLNVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSDSVASNGNAEPP
PPGDFPSASPTPPGHFSPNNPPDFQVALRGSPDSFSTSSEGTAPLVPLLGRNFVHEPPGE
IRQVTMKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKQGLRIGDQIMKVNDKVFD
KVTHAEAVKVLKGSKKLCLSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLSEHRSAT
LRRTDSQRRSNMQLLQEGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITGVDQGSAAEC
GGLKVGNQILEVNGRSFLSIPHDEAVRVLKSSRHLMMTVKDVGRLPHARTVVGETKWIAS
SQIGESSANSSMAGFPVEKGASAAGKPGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLT
EAERQTMGYYVEEYRNGHIGVEQLVVALFELLNTHAKFSLLSEVRGLVTPQDLEHFDGLV
LRREIQALKARQGTAGAAALQPDSLSMVSYPDTLTSSSASFMTNTTLSSARNDSVVESNE
DPPPESLNTLLTDISLDDVLSTTAESPPSFKPPPPPGVHRRPTRRDQLNKCPSSESSHSG
LYFTAPASHNHSKEPGHTPASPSLHHKQERPREPSRDYAAVRKREPSVPSKNEQITAAHL
SMVTQHAIGPFPRVQSPSRGTKPAAPSPSPPPPPPLPAPNPPPSLPLKLMSMSKASPSSP
GSQQRFVTVEVHRPNAEPDFNEVRPLPQARGGALSQLSDSGQTLSEDSGVDIAESGHISK
DRSPHSSRTRHPRDTQGGGGDNPSKPPGLLEPTSTLVRVAKSASTLGIAIEGGANTRQPL
PRIVTIQRGGSAHNCGQLKVGQVILEVNGVSMRGREHRDAARLIAEAFKTKERDHVDFLV
TDFNVAL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccgacctggagcgcatgtcgctcagctcctcggccaactcggtggcctcc
agcgcacggacgttgtcggccaacgtgaggaagctgcacaacgcgctcaacctcctgctc
aacgactttgagagagagcagttcatccactgcctcaacgtgtaccactccaaacgcaac
gtgtacgacctggttcagacccttaacgtcatcctcaacgcgcccagcaagcggcaactt
ctgcccatgctgcggttagtcatcccccgctctgaccagcttctcttcgagcagtacacc
tcggagggcctctacttaaaatcggattcagttgcaagcaatggcaacgccgaacccccg
ccaccgggcgacttcccaagcgccagccctactcccccggggcatttctcgccaaacaac
ccgcccgatttccaggtggcgttgcgtggctcgccggacagcttcagcaccagcagcgag
gggacagctccgctggtgccgctgcttgggaggaactttgtccacgagccgccgggcgag
atacgacaggttaccatgaagcgacacaagagcaacgagggtctgggcttcagcatccgc
ggcggctcggagcacggggtcggcatctacgtgtccctggtggagccggggagcctggcg
gagaaacagggtctccgaatcggtgaccagatcatgaaagtcaacgacaaagtcttcgac
aaagtcacccatgctgaagcggtgaaggtgctgaagggcagtaaaaagctttgcctctct
gtgcgttcagtcgggcggattcccggcggctacgtcaccaaccatgtttacacctgggtt
gaccctcagggtcggagtgtgtccccccctcccgacctgagtgagcaccggagcgccacc
ctgaggagaaccgacagccagcgacgcagcaacatgcagctactgcaggagggagacgag
aagaaggtcaatttggttttggatgacggccggtctctgggtctgatgatccggggggga
gcagaatatgctctgggtatttacatcaccggagtggaccagggctcagcagcagaatgt
ggaggactcaaggtcggcaaccagatcttggaggtgaacggccgcagctttctgagcatc
ccgcacgacgaagccgtcagggtcctgaagtcgtcacgccacctgatgatgacggtgaaa
gacgtgggccgcctgccgcacgccaggacagtggtgggggagaccaagtggatcgccagc
tcgcagatcggagagagctccgccaacagcagcatggcagggttcccggtggaaaaagga
gcctcggcagcaggaaagcctgggttttataaaggcgttgcggggtcacaggtgaccctg
tccagcctggtgaaccagtcgcgggccatgctggaggagcaggcgcgccacttgctgact
gaggcggagcggcagaccatgggctactacgtggaggagtaccggaacggacacatcggt
gtggagcagctcgtggtggcgctgttcgagctgctcaacacgcacgcaaagttctctctg
ctgtcagaggtgcgaggtctggtcaccccacaggacctggagcactttgacgggctggtg
ctgagacgtgaaattcaggctctaaaagcgcgacagggaacagctggagccgcggcgctc
caaccagactccctgtccatggtgtcgtacccagacaccctgacctcgtcttcagccagc
ttcatgaccaacaccaccctcagctctgcacggaacgacagcgtggtggagagtaatgag
gatcctcctccagagagtctaaacacgctgctgaccgacatctcactggacgatgtactg
tccaccacagctgaatcccccccctccttcaagcctccgcccccaccgggggtgcacagg
cgcccaactagacgagatcagctcaacaaatgcccctcttccgaatcctcccactcaggc
ttgtacttcacagccccggcctctcacaaccacagcaaagagccaggacacacccccgcc
tcgccctcactacaccacaaacaagaacgtcccagggaaccgtctcgggactacgcggcc
gtcagaaagagagaaccttcggtaccttctaagaacgaacaaataacagcggctcacttg
tccatggtcacacagcacgccatcggccctttccccagggtccagtcccccagcagaggc
accaaacctgctgccccatccccttcacctccacctccacctccactccctgctcctaac
ccgcccccttctcttcctcttaaactgatgtctatgtccaaagcctccccctcctctcct
ggctctcaacagcggtttgttacggtggaggttcacaggcccaacgcagagcccgacttc
aacgaggtgcgcccgctgccccaagctcgaggtggcgctctgtctcaactgtcagacagc
ggccagaccctcagtgaggacagcggggtggacatagctgagtcaggacacatcagcaaa
gacagaagcccacattcctcacgcacacgccacccccgagacactcaggggggcgggggg
gacaacccctccaaaccgccggggctgttggagcccacctctacactagtgagggttgca
aagagtgccagcactctgggtattgccattgaaggtggagccaacactcgccagccgctg
ccacgaattgtcacaatacagaggggtggttcagctcataactgcggccagctgaaggtg
ggacaggtgatcctggaggtaaacggggtttccatgaggggccgcgagcacagggacgcc
gcacgcctcatcgctgaggccttcaagaccaaagagagggaccacgtggacttcctggtc
accgatttcaacgttgctctatag
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